RNA–Protein interactions for RNA: ENST00000366758.7

JMJD4-201, Transcript of jumonji domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene JMJD4, Length 2,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JMJD4-201ENST00000366758 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
JMJD4-201ENST00000366758 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
JMJD4-201ENST00000366758 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
JMJD4-201ENST00000366758 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
JMJD4-201ENST00000366758 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
JMJD4-201ENST00000366758 DCAF8L2P0C7V8 631 aa30.38■■■□□ 2.45
JMJD4-201ENST00000366758 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
JMJD4-201ENST00000366758 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
JMJD4-201ENST00000366758 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
JMJD4-201ENST00000366758 ABCC9O60706 1549 aa29.27■■■□□ 2.28
JMJD4-201ENST00000366758 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
JMJD4-201ENST00000366758 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
JMJD4-201ENST00000366758 NACADO15069 1562 aa28.97■■■□□ 2.23
JMJD4-201ENST00000366758 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
JMJD4-201ENST00000366758 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
JMJD4-201ENST00000366758 CECR2Q9BXF3 1484 aa28.6■■■□□ 2.17
JMJD4-201ENST00000366758 PCGF6Q9BYE7 350 aa28.53■■■□□ 2.16
JMJD4-201ENST00000366758 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
JMJD4-201ENST00000366758 HRCP23327 699 aa28.5■■■□□ 2.15
JMJD4-201ENST00000366758 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
JMJD4-201ENST00000366758 WIZO95785 1651 aa28.34■■■□□ 2.13
JMJD4-201ENST00000366758 BAZ1AQ9NRL2 1556 aaPredicted RBP28.22■■■□□ 2.11
JMJD4-201ENST00000366758 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
JMJD4-201ENST00000366758 TRIM26Q12899 539 aaPredicted RBP28.08■■■□□ 2.09
JMJD4-201ENST00000366758 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
JMJD4-201ENST00000366758 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
JMJD4-201ENST00000366758 TOP2AP11388 1531 aaKnown RBP27.96■■■□□ 2.07
JMJD4-201ENST00000366758 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
JMJD4-201ENST00000366758 EHMT2Q96KQ7 1210 aa27.88■■■□□ 2.05
JMJD4-201ENST00000366758 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
JMJD4-201ENST00000366758 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
JMJD4-201ENST00000366758 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
JMJD4-201ENST00000366758 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
JMJD4-201ENST00000366758 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.02
JMJD4-201ENST00000366758 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
JMJD4-201ENST00000366758 ZEB1P37275 1124 aaPredicted RBP27.47■■□□□ 1.99
JMJD4-201ENST00000366758 PEG3Q9GZU2 1588 aa27.46■■□□□ 1.99
JMJD4-201ENST00000366758 SOGA1O94964 1423 aa27.37■■□□□ 1.97
JMJD4-201ENST00000366758 EEA1Q15075 1411 aa27.31■■□□□ 1.96
JMJD4-201ENST00000366758 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
JMJD4-201ENST00000366758 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
JMJD4-201ENST00000366758 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
JMJD4-201ENST00000366758 CEP162Q5TB80 1403 aa27.23■■□□□ 1.95
JMJD4-201ENST00000366758 RUSC2Q8N2Y8 1516 aa27.23■■□□□ 1.95
JMJD4-201ENST00000366758 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
JMJD4-201ENST00000366758 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
JMJD4-201ENST00000366758 UBTFP17480 764 aaKnown RBP27.11■■□□□ 1.93
JMJD4-201ENST00000366758 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
JMJD4-201ENST00000366758 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
JMJD4-201ENST00000366758 TTBK1Q5TCY1 1321 aaPredicted RBP26.97■■□□□ 1.91
JMJD4-201ENST00000366758 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
JMJD4-201ENST00000366758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.93■■□□□ 1.9
JMJD4-201ENST00000366758 KIF21BO75037 1637 aa26.92■■□□□ 1.9
JMJD4-201ENST00000366758 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
JMJD4-201ENST00000366758 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
JMJD4-201ENST00000366758 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
JMJD4-201ENST00000366758 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
JMJD4-201ENST00000366758 CLIP1P30622 1438 aa26.76■■□□□ 1.87
JMJD4-201ENST00000366758 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
JMJD4-201ENST00000366758 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
JMJD4-201ENST00000366758 VPS8Q8N3P4 1428 aa26.63■■□□□ 1.85
JMJD4-201ENST00000366758 CUX1P39880 1505 aa26.56■■□□□ 1.84
JMJD4-201ENST00000366758 RANGAP1P46060 587 aaPredicted RBP26.54■■□□□ 1.84
JMJD4-201ENST00000366758 CFTRP13569 1480 aa26.54■■□□□ 1.84
JMJD4-201ENST00000366758 APLP2Q06481 763 aa26.52■■□□□ 1.84
JMJD4-201ENST00000366758 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
JMJD4-201ENST00000366758 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
JMJD4-201ENST00000366758 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
JMJD4-201ENST00000366758 HNRNPUL2Q1KMD3 747 aaKnown RBP26.42■■□□□ 1.82
JMJD4-201ENST00000366758 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
JMJD4-201ENST00000366758 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
JMJD4-201ENST00000366758 DIEXFQ68CQ4 756 aaKnown RBP26.29■■□□□ 1.8
JMJD4-201ENST00000366758 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
JMJD4-201ENST00000366758 CUX2O14529 1486 aa26.19■■□□□ 1.78
JMJD4-201ENST00000366758 ZNF316A6NFI3 1004 aaPredicted RBP26.16■■□□□ 1.78
JMJD4-201ENST00000366758 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
JMJD4-201ENST00000366758 SCAF1Q9H7N4 1312 aaKnown RBP26.13■■□□□ 1.77
JMJD4-201ENST00000366758 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
JMJD4-201ENST00000366758 ARHGAP35Q9NRY4 1499 aa26.13■■□□□ 1.77
JMJD4-201ENST00000366758 IGF1RP08069 1367 aa26.12■■□□□ 1.77
JMJD4-201ENST00000366758 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
JMJD4-201ENST00000366758 CARMIL1Q5VZK9 1371 aa26.03■■□□□ 1.76
JMJD4-201ENST00000366758 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
JMJD4-201ENST00000366758 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
JMJD4-201ENST00000366758 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
JMJD4-201ENST00000366758 NEUROD1Q13562 356 aa25.93■■□□□ 1.74
JMJD4-201ENST00000366758 DHX57Q6P158 1386 aaKnown RBP25.91■■□□□ 1.74
JMJD4-201ENST00000366758 CENPBP07199 599 aaPredicted RBP25.91■■□□□ 1.74
JMJD4-201ENST00000366758 CLSPNQ9HAW4 1339 aa25.91■■□□□ 1.74
JMJD4-201ENST00000366758 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.74
JMJD4-201ENST00000366758 CCNB3Q8WWL7 1395 aa25.89■■□□□ 1.74
JMJD4-201ENST00000366758 RAD54L2Q9Y4B4 1467 aa25.84■■□□□ 1.73
JMJD4-201ENST00000366758 TIAM1Q13009 1591 aa25.83■■□□□ 1.73
JMJD4-201ENST00000366758 MAP3K1Q13233 1512 aa25.83■■□□□ 1.73
JMJD4-201ENST00000366758 TOPBP1Q92547 1522 aa25.83■■□□□ 1.73
JMJD4-201ENST00000366758 NESP48681 1621 aa25.82■■□□□ 1.72
JMJD4-201ENST00000366758 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
JMJD4-201ENST00000366758 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
JMJD4-201ENST00000366758 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
JMJD4-201ENST00000366758 ITGAEP38570 1179 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms