RNA–Protein interactions for RNA: ENST00000636500.1

SMIM29-209, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-209ENST00000636500 NISCHQ9Y2I1 1504 aa45.38■■■■■ 4.86
SMIM29-209ENST00000636500 CCDC180Q9P1Z9 1646 aa40.46■■■■■ 4.07
SMIM29-209ENST00000636500 ABCC9O60706 1549 aa39.7■■■■□ 3.95
SMIM29-209ENST00000636500 RB1CC1Q8TDY2 1594 aa38.1■■■■□ 3.69
SMIM29-209ENST00000636500 NACADO15069 1562 aa38.02■■■■□ 3.68
SMIM29-209ENST00000636500 DCAF8L2P0C7V8 631 aa37.86■■■■□ 3.65
SMIM29-209ENST00000636500 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
SMIM29-209ENST00000636500 MYO15BQ96JP2 1530 aa37.74■■■■□ 3.63
SMIM29-209ENST00000636500 DCAF1Q9Y4B6 1507 aa37.53■■■■□ 3.6
SMIM29-209ENST00000636500 UNC13AQ9UPW8 1703 aa37.43■■■■□ 3.58
SMIM29-209ENST00000636500 BICRAQ9NZM4 1560 aa37.06■■■■□ 3.52
SMIM29-209ENST00000636500 PABPN1Q86U42 306 aaKnown RBP eCLIP37.04■■■■□ 3.52
SMIM29-209ENST00000636500 SCRIBQ14160 1630 aa36.9■■■■□ 3.5
SMIM29-209ENST00000636500 DNAJC5BQ9UF47 199 aa36.63■■■■□ 3.45
SMIM29-209ENST00000636500 SHROOM4Q9ULL8 1493 aa36.52■■■■□ 3.44
SMIM29-209ENST00000636500 EIF4G1Q04637 1599 aaKnown RBP36.03■■■■□ 3.36
SMIM29-209ENST00000636500 CC2D2AQ9P2K1 1620 aa35.95■■■■□ 3.35
SMIM29-209ENST00000636500 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
SMIM29-209ENST00000636500 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
SMIM29-209ENST00000636500 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
SMIM29-209ENST00000636500 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
SMIM29-209ENST00000636500 NCAPD3P42695 1498 aa35.08■■■■□ 3.21
SMIM29-209ENST00000636500 SMARCA2P51531 1590 aa35.01■■■■□ 3.2
SMIM29-209ENST00000636500 MROH2BQ7Z745 1585 aa35■■■■□ 3.19
SMIM29-209ENST00000636500 PEG3Q9GZU2 1588 aa34.93■■■■□ 3.18
SMIM29-209ENST00000636500 HMGXB3Q12766 1538 aa34.91■■■■□ 3.18
SMIM29-209ENST00000636500 BAZ1BQ9UIG0 1483 aaKnown RBP34.77■■■■□ 3.16
SMIM29-209ENST00000636500 WIZO95785 1651 aa34.66■■■■□ 3.14
SMIM29-209ENST00000636500 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
SMIM29-209ENST00000636500 NESP48681 1621 aa34.35■■■■□ 3.09
SMIM29-209ENST00000636500 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
SMIM29-209ENST00000636500 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
SMIM29-209ENST00000636500 ERCC6Q03468 1493 aa34.16■■■■□ 3.06
SMIM29-209ENST00000636500 CADPSQ9ULU8 1353 aa34.02■■■■□ 3.04
SMIM29-209ENST00000636500 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
SMIM29-209ENST00000636500 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
SMIM29-209ENST00000636500 THOC2Q8NI27 1593 aaKnown RBP33.89■■■■□ 3.02
SMIM29-209ENST00000636500 CUX2O14529 1486 aa33.89■■■■□ 3.02
SMIM29-209ENST00000636500 CCDC88BA6NC98 1476 aa33.82■■■■□ 3
SMIM29-209ENST00000636500 CFTRP13569 1480 aa33.82■■■■□ 3
SMIM29-209ENST00000636500 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
SMIM29-209ENST00000636500 FANCD2Q9BXW9 1451 aa33.66■■■□□ 2.98
SMIM29-209ENST00000636500 MRC2Q9UBG0 1479 aa33.62■■■□□ 2.97
SMIM29-209ENST00000636500 CEP164Q9UPV0 1460 aa33.62■■■□□ 2.97
SMIM29-209ENST00000636500 WDR62O43379 1518 aa33.55■■■□□ 2.96
SMIM29-209ENST00000636500 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
SMIM29-209ENST00000636500 URB2Q14146 1524 aaKnown RBP33.38■■■□□ 2.93
SMIM29-209ENST00000636500 TOPBP1Q92547 1522 aa33.12■■■□□ 2.89
SMIM29-209ENST00000636500 DNMBPQ6XZF7 1577 aa33.08■■■□□ 2.89
SMIM29-209ENST00000636500 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
SMIM29-209ENST00000636500 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
SMIM29-209ENST00000636500 IFT140Q96RY7 1462 aa32.91■■■□□ 2.86
SMIM29-209ENST00000636500 CUX1P39880 1505 aa32.85■■■□□ 2.85
SMIM29-209ENST00000636500 ZNF608Q9ULD9 1512 aaPredicted RBP32.85■■■□□ 2.85
SMIM29-209ENST00000636500 TARBP1Q13395 1621 aaKnown RBP32.84■■■□□ 2.85
SMIM29-209ENST00000636500 POLA1P09884 1462 aaPredicted RBP32.83■■■□□ 2.85
SMIM29-209ENST00000636500 FGD5Q6ZNL6 1462 aa32.73■■■□□ 2.83
SMIM29-209ENST00000636500 EIF4G3O43432 1585 aaKnown RBP32.72■■■□□ 2.83
SMIM29-209ENST00000636500 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
SMIM29-209ENST00000636500 SOGA1O94964 1423 aa32.65■■■□□ 2.82
SMIM29-209ENST00000636500 AQRO60306 1485 aaKnown RBP eCLIP32.61■■■□□ 2.812e-7■■■■■ 56.2
SMIM29-209ENST00000636500 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
SMIM29-209ENST00000636500 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
SMIM29-209ENST00000636500 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
SMIM29-209ENST00000636500 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
SMIM29-209ENST00000636500 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
SMIM29-209ENST00000636500 WRNQ14191 1432 aaPredicted RBP eCLIP32.5■■■□□ 2.79
SMIM29-209ENST00000636500 OSCARQ8IYS5 282 aa32.4■■■□□ 2.78
SMIM29-209ENST00000636500 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
SMIM29-209ENST00000636500 CHD1O14646 1710 aa32.4■■■□□ 2.78
SMIM29-209ENST00000636500 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
SMIM29-209ENST00000636500 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
SMIM29-209ENST00000636500 SNAPC4Q5SXM2 1469 aa32.3■■■□□ 2.76
SMIM29-209ENST00000636500 GRIN2BQ13224 1484 aa32.29■■■□□ 2.76
SMIM29-209ENST00000636500 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
SMIM29-209ENST00000636500 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
SMIM29-209ENST00000636500 FBLN2P98095 1184 aa32.15■■■□□ 2.74
SMIM29-209ENST00000636500 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
SMIM29-209ENST00000636500 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
SMIM29-209ENST00000636500 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
SMIM29-209ENST00000636500 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
SMIM29-209ENST00000636500 CHMP7Q8WUX9 453 aaPredicted RBP32.04■■■□□ 2.72
SMIM29-209ENST00000636500 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
SMIM29-209ENST00000636500 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
SMIM29-209ENST00000636500 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
SMIM29-209ENST00000636500 ARHGEF11O15085 1522 aa31.97■■■□□ 2.71
SMIM29-209ENST00000636500 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
SMIM29-209ENST00000636500 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
SMIM29-209ENST00000636500 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SMIM29-209ENST00000636500 CEP170Q5SW79 1584 aa31.81■■■□□ 2.68
SMIM29-209ENST00000636500 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
SMIM29-209ENST00000636500 NUP160Q12769 1436 aa31.77■■■□□ 2.68
SMIM29-209ENST00000636500 IGF1RP08069 1367 aa31.74■■■□□ 2.67
SMIM29-209ENST00000636500 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
SMIM29-209ENST00000636500 CUL7Q14999 1698 aa31.7■■■□□ 2.66
SMIM29-209ENST00000636500 CYB5RLQ6IPT4 315 aa31.62■■■□□ 2.65
SMIM29-209ENST00000636500 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
SMIM29-209ENST00000636500 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
SMIM29-209ENST00000636500 ERCC6L2Q5T890 1561 aa31.58■■■□□ 2.65
SMIM29-209ENST00000636500 CARMIL1Q5VZK9 1371 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms