RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
HLA-DQB1-204ENST00000399084 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
HLA-DQB1-204ENST00000399084 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
HLA-DQB1-204ENST00000399084 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
HLA-DQB1-204ENST00000399084 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
HLA-DQB1-204ENST00000399084 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
HLA-DQB1-204ENST00000399084 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
HLA-DQB1-204ENST00000399084 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
HLA-DQB1-204ENST00000399084 NACADO15069 1562 aa30.67■■■□□ 2.5
HLA-DQB1-204ENST00000399084 ABCC9O60706 1549 aa30.47■■■□□ 2.47
HLA-DQB1-204ENST00000399084 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
HLA-DQB1-204ENST00000399084 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
HLA-DQB1-204ENST00000399084 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
HLA-DQB1-204ENST00000399084 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.38
HLA-DQB1-204ENST00000399084 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
HLA-DQB1-204ENST00000399084 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
HLA-DQB1-204ENST00000399084 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
HLA-DQB1-204ENST00000399084 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.3
HLA-DQB1-204ENST00000399084 WIZO95785 1651 aa29.28■■■□□ 2.28
HLA-DQB1-204ENST00000399084 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
HLA-DQB1-204ENST00000399084 BICRAQ9NZM4 1560 aa29.17■■■□□ 2.26
HLA-DQB1-204ENST00000399084 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
HLA-DQB1-204ENST00000399084 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
HLA-DQB1-204ENST00000399084 PEG3Q9GZU2 1588 aa28.94■■■□□ 2.22
HLA-DQB1-204ENST00000399084 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
HLA-DQB1-204ENST00000399084 EIF4G1Q04637 1599 aaKnown RBP28.83■■■□□ 2.21
HLA-DQB1-204ENST00000399084 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
HLA-DQB1-204ENST00000399084 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
HLA-DQB1-204ENST00000399084 LOC105371045A0A1W2PR82 267 aa28.73■■■□□ 2.19
HLA-DQB1-204ENST00000399084 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
HLA-DQB1-204ENST00000399084 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
HLA-DQB1-204ENST00000399084 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
HLA-DQB1-204ENST00000399084 FAM9AQ8IZU1 332 aaPredicted RBP28.34■■■□□ 2.13
HLA-DQB1-204ENST00000399084 EEA1Q15075 1411 aa28.32■■■□□ 2.12
HLA-DQB1-204ENST00000399084 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
HLA-DQB1-204ENST00000399084 ABCC8Q09428 1581 aa28.31■■■□□ 2.12
HLA-DQB1-204ENST00000399084 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
HLA-DQB1-204ENST00000399084 PCGF6Q9BYE7 350 aa28.23■■■□□ 2.11
HLA-DQB1-204ENST00000399084 TRIM26Q12899 539 aaPredicted RBP28.21■■■□□ 2.11
HLA-DQB1-204ENST00000399084 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.1
HLA-DQB1-204ENST00000399084 HRCP23327 699 aa28.11■■■□□ 2.09
HLA-DQB1-204ENST00000399084 CSRNP3Q8WYN3 585 aa28.01■■■□□ 2.07
HLA-DQB1-204ENST00000399084 SOGA1O94964 1423 aa27.99■■■□□ 2.07
HLA-DQB1-204ENST00000399084 TNIKQ9UKE5 1360 aa27.95■■■□□ 2.06
HLA-DQB1-204ENST00000399084 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
HLA-DQB1-204ENST00000399084 TOP2BQ02880 1626 aa27.87■■■□□ 2.05
HLA-DQB1-204ENST00000399084 CFTRP13569 1480 aa27.85■■■□□ 2.05
HLA-DQB1-204ENST00000399084 GOLGA3Q08378 1498 aa27.84■■■□□ 2.05
HLA-DQB1-204ENST00000399084 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
HLA-DQB1-204ENST00000399084 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
HLA-DQB1-204ENST00000399084 RUSC2Q8N2Y8 1516 aa27.79■■■□□ 2.04
HLA-DQB1-204ENST00000399084 KIF21BO75037 1637 aa27.78■■■□□ 2.04
HLA-DQB1-204ENST00000399084 EHMT2Q96KQ7 1210 aa27.78■■■□□ 2.04
HLA-DQB1-204ENST00000399084 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
HLA-DQB1-204ENST00000399084 PRDM2Q13029 1718 aa27.69■■■□□ 2.02
HLA-DQB1-204ENST00000399084 UBTFP17480 764 aaKnown RBP27.66■■■□□ 2.02
HLA-DQB1-204ENST00000399084 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
HLA-DQB1-204ENST00000399084 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
HLA-DQB1-204ENST00000399084 ZEB1P37275 1124 aaPredicted RBP27.6■■■□□ 2.01
HLA-DQB1-204ENST00000399084 CUX1P39880 1505 aa27.56■■■□□ 2
HLA-DQB1-204ENST00000399084 ERICH3Q5RHP9 1530 aa27.51■■□□□ 1.99
HLA-DQB1-204ENST00000399084 KIF27Q86VH2 1401 aa27.47■■□□□ 1.99
HLA-DQB1-204ENST00000399084 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
HLA-DQB1-204ENST00000399084 RAPGEF2Q9Y4G8 1499 aa27.4■■□□□ 1.98
HLA-DQB1-204ENST00000399084 CLIP1P30622 1438 aa27.4■■□□□ 1.98
HLA-DQB1-204ENST00000399084 VPS8Q8N3P4 1428 aa27.29■■□□□ 1.96
HLA-DQB1-204ENST00000399084 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
HLA-DQB1-204ENST00000399084 PPARGC1BQ86YN6 1023 aaKnown RBP27.2■■□□□ 1.94
HLA-DQB1-204ENST00000399084 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
HLA-DQB1-204ENST00000399084 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
HLA-DQB1-204ENST00000399084 DNMBPQ6XZF7 1577 aa27.15■■□□□ 1.94
HLA-DQB1-204ENST00000399084 CUX2O14529 1486 aa27.14■■□□□ 1.94
HLA-DQB1-204ENST00000399084 IGF1RP08069 1367 aa27.12■■□□□ 1.93
HLA-DQB1-204ENST00000399084 APLP2Q06481 763 aa27.12■■□□□ 1.93
HLA-DQB1-204ENST00000399084 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
HLA-DQB1-204ENST00000399084 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
HLA-DQB1-204ENST00000399084 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
HLA-DQB1-204ENST00000399084 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
HLA-DQB1-204ENST00000399084 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
HLA-DQB1-204ENST00000399084 NESP48681 1621 aa26.95■■□□□ 1.9
HLA-DQB1-204ENST00000399084 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
HLA-DQB1-204ENST00000399084 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
HLA-DQB1-204ENST00000399084 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
HLA-DQB1-204ENST00000399084 CUL7Q14999 1698 aa26.85■■□□□ 1.89
HLA-DQB1-204ENST00000399084 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
HLA-DQB1-204ENST00000399084 TTBK1Q5TCY1 1321 aaPredicted RBP26.81■■□□□ 1.88
HLA-DQB1-204ENST00000399084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.8■■□□□ 1.88
HLA-DQB1-204ENST00000399084 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
HLA-DQB1-204ENST00000399084 MAP3K1Q13233 1512 aa26.79■■□□□ 1.88
HLA-DQB1-204ENST00000399084 RANGAP1P46060 587 aaPredicted RBP26.79■■□□□ 1.88
HLA-DQB1-204ENST00000399084 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
HLA-DQB1-204ENST00000399084 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.87
HLA-DQB1-204ENST00000399084 EFCAB5A4FU69 1503 aa26.68■■□□□ 1.86
HLA-DQB1-204ENST00000399084 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
HLA-DQB1-204ENST00000399084 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
HLA-DQB1-204ENST00000399084 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
HLA-DQB1-204ENST00000399084 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
HLA-DQB1-204ENST00000399084 DNAJC5Q9H3Z4 198 aa26.6■■□□□ 1.85
HLA-DQB1-204ENST00000399084 CTTNBP2Q8WZ74 1663 aa26.58■■□□□ 1.85
HLA-DQB1-204ENST00000399084 KANK4Q5T7N3 995 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms