RNA–Protein interactions for RNA: ENST00000232508.9

CYB561D2-201, Transcript of cytochrome b561 family member D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D2-201ENST00000232508 NISCHQ9Y2I1 1504 aa45.38■■■■■ 4.86
CYB561D2-201ENST00000232508 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.05
CYB561D2-201ENST00000232508 ABCC9O60706 1549 aa39.41■■■■□ 3.9
CYB561D2-201ENST00000232508 RB1CC1Q8TDY2 1594 aa37.91■■■■□ 3.66
CYB561D2-201ENST00000232508 NACADO15069 1562 aa37.89■■■■□ 3.66
CYB561D2-201ENST00000232508 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
CYB561D2-201ENST00000232508 MYO15BQ96JP2 1530 aa37.72■■■■□ 3.63
CYB561D2-201ENST00000232508 DCAF8L2P0C7V8 631 aa37.6■■■■□ 3.61
CYB561D2-201ENST00000232508 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
CYB561D2-201ENST00000232508 UNC13AQ9UPW8 1703 aa37.2■■■■□ 3.55
CYB561D2-201ENST00000232508 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
CYB561D2-201ENST00000232508 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
CYB561D2-201ENST00000232508 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.48
CYB561D2-201ENST00000232508 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
CYB561D2-201ENST00000232508 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
CYB561D2-201ENST00000232508 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
CYB561D2-201ENST00000232508 CC2D2AQ9P2K1 1620 aa35.7■■■■□ 3.31
CYB561D2-201ENST00000232508 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
CYB561D2-201ENST00000232508 SMARCA4P51532 1647 aa35.24■■■■□ 3.23
CYB561D2-201ENST00000232508 BAZ1AQ9NRL2 1556 aaPredicted RBP35.14■■■■□ 3.22
CYB561D2-201ENST00000232508 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.19
CYB561D2-201ENST00000232508 MROH2BQ7Z745 1585 aa35■■■■□ 3.19
CYB561D2-201ENST00000232508 NCAPD3P42695 1498 aa34.97■■■■□ 3.19
CYB561D2-201ENST00000232508 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
CYB561D2-201ENST00000232508 PEG3Q9GZU2 1588 aa34.93■■■■□ 3.18
CYB561D2-201ENST00000232508 HMGXB3Q12766 1538 aa34.85■■■■□ 3.17
CYB561D2-201ENST00000232508 BAZ1BQ9UIG0 1483 aaKnown RBP34.66■■■■□ 3.14
CYB561D2-201ENST00000232508 WIZO95785 1651 aa34.62■■■■□ 3.13
CYB561D2-201ENST00000232508 RSF1Q96T23 1441 aaPredicted RBP34.57■■■■□ 3.13
CYB561D2-201ENST00000232508 TOP2AP11388 1531 aaKnown RBP34.25■■■■□ 3.07
CYB561D2-201ENST00000232508 NESP48681 1621 aa34.17■■■■□ 3.06
CYB561D2-201ENST00000232508 LAMC3Q9Y6N6 1575 aa34.04■■■■□ 3.04
CYB561D2-201ENST00000232508 CADPSQ9ULU8 1353 aa33.91■■■■□ 3.02
CYB561D2-201ENST00000232508 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
CYB561D2-201ENST00000232508 CCDC88BA6NC98 1476 aa33.81■■■■□ 3
CYB561D2-201ENST00000232508 KIF21AQ7Z4S6 1674 aa33.79■■■■□ 3
CYB561D2-201ENST00000232508 CFTRP13569 1480 aa33.77■■■■□ 3
CYB561D2-201ENST00000232508 PDS5BQ9NTI5 1447 aa33.72■■■□□ 2.99
CYB561D2-201ENST00000232508 THOC2Q8NI27 1593 aaKnown RBP33.72■■■□□ 2.99
CYB561D2-201ENST00000232508 CUX2O14529 1486 aa33.61■■■□□ 2.97
CYB561D2-201ENST00000232508 PRDM2Q13029 1718 aa33.57■■■□□ 2.96
CYB561D2-201ENST00000232508 FANCD2Q9BXW9 1451 aa33.54■■■□□ 2.96
CYB561D2-201ENST00000232508 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
CYB561D2-201ENST00000232508 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
CYB561D2-201ENST00000232508 MRC2Q9UBG0 1479 aa33.46■■■□□ 2.95
CYB561D2-201ENST00000232508 WDR62O43379 1518 aa33.41■■■□□ 2.94
CYB561D2-201ENST00000232508 URB2Q14146 1524 aaKnown RBP33.28■■■□□ 2.92
CYB561D2-201ENST00000232508 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
CYB561D2-201ENST00000232508 DNMBPQ6XZF7 1577 aa33.01■■■□□ 2.88
CYB561D2-201ENST00000232508 ABCC8Q09428 1581 aa32.93■■■□□ 2.86
CYB561D2-201ENST00000232508 CUX1P39880 1505 aa32.84■■■□□ 2.85
CYB561D2-201ENST00000232508 IFT140Q96RY7 1462 aa32.79■■■□□ 2.84
CYB561D2-201ENST00000232508 POLA1P09884 1462 aaPredicted RBP32.78■■■□□ 2.84
CYB561D2-201ENST00000232508 TARBP1Q13395 1621 aaKnown RBP32.74■■■□□ 2.83
CYB561D2-201ENST00000232508 ZNF608Q9ULD9 1512 aaPredicted RBP32.71■■■□□ 2.83
CYB561D2-201ENST00000232508 FGD5Q6ZNL6 1462 aa32.68■■■□□ 2.82
CYB561D2-201ENST00000232508 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
CYB561D2-201ENST00000232508 EIF4G3O43432 1585 aaKnown RBP32.59■■■□□ 2.81
CYB561D2-201ENST00000232508 BIVM-ERCC5R4GMW8 1640 aa32.57■■■□□ 2.8
CYB561D2-201ENST00000232508 SYNJ1O43426 1573 aa32.57■■■□□ 2.8
CYB561D2-201ENST00000232508 SOGA1O94964 1423 aa32.54■■■□□ 2.8
CYB561D2-201ENST00000232508 TOP2BQ02880 1626 aa32.54■■■□□ 2.8
CYB561D2-201ENST00000232508 WRNQ14191 1432 aaPredicted RBP eCLIP32.53■■■□□ 2.8
CYB561D2-201ENST00000232508 WDR97A6NE52 1622 aa32.52■■■□□ 2.8
CYB561D2-201ENST00000232508 DNAJC5Q9H3Z4 198 aa32.5■■■□□ 2.79
CYB561D2-201ENST00000232508 AQRO60306 1485 aaKnown RBP eCLIP32.46■■■□□ 2.796e-8■■■□□ 16
CYB561D2-201ENST00000232508 ABCA10Q8WWZ4 1543 aa32.38■■■□□ 2.77
CYB561D2-201ENST00000232508 TDRD9Q8NDG6 1382 aaKnown RBP32.37■■■□□ 2.77
CYB561D2-201ENST00000232508 ABCA5Q8WWZ7 1642 aa32.31■■■□□ 2.76
CYB561D2-201ENST00000232508 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
CYB561D2-201ENST00000232508 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
CYB561D2-201ENST00000232508 GAPVD1Q14C86 1478 aa32.2■■■□□ 2.75
CYB561D2-201ENST00000232508 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
CYB561D2-201ENST00000232508 CHD1O14646 1710 aa32.18■■■□□ 2.74
CYB561D2-201ENST00000232508 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
CYB561D2-201ENST00000232508 OSCARQ8IYS5 282 aa32.07■■■□□ 2.72
CYB561D2-201ENST00000232508 SYNJ2O15056 1496 aa32■■■□□ 2.71
CYB561D2-201ENST00000232508 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
CYB561D2-201ENST00000232508 ERICH3Q5RHP9 1530 aa31.97■■■□□ 2.71
CYB561D2-201ENST00000232508 FBLN2P98095 1184 aa31.88■■■□□ 2.69
CYB561D2-201ENST00000232508 CLASP1Q7Z460 1538 aa31.86■■■□□ 2.69
CYB561D2-201ENST00000232508 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
CYB561D2-201ENST00000232508 CHMP7Q8WUX9 453 aaPredicted RBP31.82■■■□□ 2.68
CYB561D2-201ENST00000232508 GRIN2AQ12879 1464 aa31.81■■■□□ 2.68
CYB561D2-201ENST00000232508 KIF27Q86VH2 1401 aa31.81■■■□□ 2.68
CYB561D2-201ENST00000232508 RIMBP3CA6NJZ7 1639 aa31.75■■■□□ 2.67
CYB561D2-201ENST00000232508 RIMBP3BA6NNM3 1639 aa31.75■■■□□ 2.67
CYB561D2-201ENST00000232508 RIMBP3Q9UFD9 1639 aa31.75■■■□□ 2.67
CYB561D2-201ENST00000232508 IGF1RP08069 1367 aa31.73■■■□□ 2.67
CYB561D2-201ENST00000232508 ARHGEF11O15085 1522 aa31.73■■■□□ 2.67
CYB561D2-201ENST00000232508 NUP160Q12769 1436 aa31.72■■■□□ 2.67
CYB561D2-201ENST00000232508 CEP170Q5SW79 1584 aa31.72■■■□□ 2.67
CYB561D2-201ENST00000232508 CUL7Q14999 1698 aa31.69■■■□□ 2.66
CYB561D2-201ENST00000232508 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
CYB561D2-201ENST00000232508 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
CYB561D2-201ENST00000232508 SHROOM2Q13796 1616 aa31.52■■■□□ 2.64
CYB561D2-201ENST00000232508 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
CYB561D2-201ENST00000232508 CARMIL1Q5VZK9 1371 aa31.5■■■□□ 2.63
CYB561D2-201ENST00000232508 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
CYB561D2-201ENST00000232508 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms