RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
SHISA9-203ENST00000558583 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
SHISA9-203ENST00000558583 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
SHISA9-203ENST00000558583 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
SHISA9-203ENST00000558583 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
SHISA9-203ENST00000558583 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
SHISA9-203ENST00000558583 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.57
SHISA9-203ENST00000558583 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.56
SHISA9-203ENST00000558583 APLP2Q06481 763 aa24.77■■□□□ 1.56
SHISA9-203ENST00000558583 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
SHISA9-203ENST00000558583 ERICH6Q7L0X2 663 aa24.65■■□□□ 1.54
SHISA9-203ENST00000558583 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
SHISA9-203ENST00000558583 MYT1Q01538 1121 aa24.24■■□□□ 1.47
SHISA9-203ENST00000558583 YTHDC1Q96MU7 727 aaKnown RBP24.22■■□□□ 1.47
SHISA9-203ENST00000558583 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
SHISA9-203ENST00000558583 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
SHISA9-203ENST00000558583 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
SHISA9-203ENST00000558583 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
SHISA9-203ENST00000558583 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
SHISA9-203ENST00000558583 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
SHISA9-203ENST00000558583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
SHISA9-203ENST00000558583 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
SHISA9-203ENST00000558583 NEFLP07196 543 aa23.68■■□□□ 1.38
SHISA9-203ENST00000558583 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
SHISA9-203ENST00000558583 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
SHISA9-203ENST00000558583 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.35
SHISA9-203ENST00000558583 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
SHISA9-203ENST00000558583 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
SHISA9-203ENST00000558583 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
SHISA9-203ENST00000558583 ITGAEP38570 1179 aa23.32■■□□□ 1.32
SHISA9-203ENST00000558583 DAXXQ9UER7 740 aaPredicted RBP23.29■■□□□ 1.32
SHISA9-203ENST00000558583 SLC24A1O60721 1099 aa22.92■■□□□ 1.26
SHISA9-203ENST00000558583 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
SHISA9-203ENST00000558583 HRCP23327 699 aa22.9■■□□□ 1.26
SHISA9-203ENST00000558583 BCANQ96GW7 911 aa22.83■■□□□ 1.25
SHISA9-203ENST00000558583 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
SHISA9-203ENST00000558583 BCL11AQ9H165 835 aa22.77■■□□□ 1.24
SHISA9-203ENST00000558583 FBLN2P98095 1184 aa22.75■■□□□ 1.23
SHISA9-203ENST00000558583 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
SHISA9-203ENST00000558583 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
SHISA9-203ENST00000558583 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
SHISA9-203ENST00000558583 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
SHISA9-203ENST00000558583 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
SHISA9-203ENST00000558583 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
SHISA9-203ENST00000558583 FAM50AQ14320 339 aaKnown RBP22.47■■□□□ 1.19
SHISA9-203ENST00000558583 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
SHISA9-203ENST00000558583 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
SHISA9-203ENST00000558583 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
SHISA9-203ENST00000558583 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
SHISA9-203ENST00000558583 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
SHISA9-203ENST00000558583 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
SHISA9-203ENST00000558583 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
SHISA9-203ENST00000558583 A0A0G2JS52 829 aa22.2■■□□□ 1.14
SHISA9-203ENST00000558583 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
SHISA9-203ENST00000558583 EIF5BO60841 1220 aaKnown RBP22.16■■□□□ 1.14
SHISA9-203ENST00000558583 PLEKHG5O94827 1062 aa22.14■■□□□ 1.13
SHISA9-203ENST00000558583 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
SHISA9-203ENST00000558583 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
SHISA9-203ENST00000558583 ABCC9O60706 1549 aa22.1■■□□□ 1.13
SHISA9-203ENST00000558583 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
SHISA9-203ENST00000558583 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
SHISA9-203ENST00000558583 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
SHISA9-203ENST00000558583 CHGAP10645 457 aaKnown RBP22.02■■□□□ 1.12
SHISA9-203ENST00000558583 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
SHISA9-203ENST00000558583 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
SHISA9-203ENST00000558583 NEFMP07197 916 aa21.96■■□□□ 1.11
SHISA9-203ENST00000558583 ANP32CO43423 234 aa21.9■■□□□ 1.1
SHISA9-203ENST00000558583 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
SHISA9-203ENST00000558583 ARXQ96QS3 562 aa21.89■■□□□ 1.1
SHISA9-203ENST00000558583 NBR1Q14596 966 aa21.77■■□□□ 1.08
SHISA9-203ENST00000558583 ANP32AP39687 249 aaKnown RBP21.76■■□□□ 1.07
SHISA9-203ENST00000558583 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
SHISA9-203ENST00000558583 FKBP8Q14318 412 aa21.66■■□□□ 1.06
SHISA9-203ENST00000558583 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
SHISA9-203ENST00000558583 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
SHISA9-203ENST00000558583 C14orf37Q86TY3 774 aa21.65■■□□□ 1.06
SHISA9-203ENST00000558583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.05
SHISA9-203ENST00000558583 HSP90AA1P07900 732 aaKnown RBP21.58■■□□□ 1.04
SHISA9-203ENST00000558583 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
SHISA9-203ENST00000558583 TULP1O00294 542 aaPredicted RBP21.51■■□□□ 1.03
SHISA9-203ENST00000558583 ANP32BQ92688 251 aaKnown RBP21.51■■□□□ 1.03
SHISA9-203ENST00000558583 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
SHISA9-203ENST00000558583 IRX6P78412 446 aaPredicted RBP21.45■■□□□ 1.03
SHISA9-203ENST00000558583 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
SHISA9-203ENST00000558583 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHISA9-203ENST00000558583 GLIPR1L2Q4G1C9 344 aa21.33■■□□□ 1
SHISA9-203ENST00000558583 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
SHISA9-203ENST00000558583 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
SHISA9-203ENST00000558583 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
SHISA9-203ENST00000558583 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
SHISA9-203ENST00000558583 DDX10Q13206 875 aaKnown RBP21.27■■□□□ 1
SHISA9-203ENST00000558583 NPHP1O15259 732 aa21.26■□□□□ 0.99
SHISA9-203ENST00000558583 KCNH8Q96L42 1107 aa21.25■□□□□ 0.99
SHISA9-203ENST00000558583 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
SHISA9-203ENST00000558583 KDM2AQ9Y2K7 1162 aa21.24■□□□□ 0.99
SHISA9-203ENST00000558583 UPF2Q9HAU5 1272 aaKnown RBP21.23■□□□□ 0.99
SHISA9-203ENST00000558583 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
SHISA9-203ENST00000558583 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
SHISA9-203ENST00000558583 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
SHISA9-203ENST00000558583 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms