RNA–Protein interactions for RNA: ENST00000543942.6

C12orf56-207, Transcript of chromosome 12 open reading frame 56, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C12orf56, Length 3,242 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-207ENST00000543942 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
C12orf56-207ENST00000543942 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
C12orf56-207ENST00000543942 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
C12orf56-207ENST00000543942 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
C12orf56-207ENST00000543942 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
C12orf56-207ENST00000543942 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.16
C12orf56-207ENST00000543942 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
C12orf56-207ENST00000543942 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
C12orf56-207ENST00000543942 HRCP23327 699 aa28.5■■■□□ 2.15
C12orf56-207ENST00000543942 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
C12orf56-207ENST00000543942 LOC105371045A0A1W2PR82 267 aa28.17■■■□□ 2.1
C12orf56-207ENST00000543942 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
C12orf56-207ENST00000543942 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
C12orf56-207ENST00000543942 DCAF1Q9Y4B6 1507 aa27.55■■■□□ 2
C12orf56-207ENST00000543942 TRIM26Q12899 539 aaPredicted RBP27.54■■■□□ 2
C12orf56-207ENST00000543942 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
C12orf56-207ENST00000543942 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
C12orf56-207ENST00000543942 RSF1Q96T23 1441 aaPredicted RBP27.05■■□□□ 1.92
C12orf56-207ENST00000543942 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
C12orf56-207ENST00000543942 ZEB1P37275 1124 aaPredicted RBP26.97■■□□□ 1.91
C12orf56-207ENST00000543942 ABCC9O60706 1549 aa26.95■■□□□ 1.9
C12orf56-207ENST00000543942 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
C12orf56-207ENST00000543942 TTBK1Q5TCY1 1321 aaPredicted RBP26.74■■□□□ 1.87
C12orf56-207ENST00000543942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
C12orf56-207ENST00000543942 SCAF1Q9H7N4 1312 aaKnown RBP26.69■■□□□ 1.86
C12orf56-207ENST00000543942 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
C12orf56-207ENST00000543942 CCER1Q8TC90 406 aaPredicted RBP26.59■■□□□ 1.85
C12orf56-207ENST00000543942 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
C12orf56-207ENST00000543942 WIZO95785 1651 aa26.3■■□□□ 1.8
C12orf56-207ENST00000543942 PELP1Q8IZL8 1130 aaKnown RBP26.27■■□□□ 1.8
C12orf56-207ENST00000543942 NEUROD1Q13562 356 aa26.26■■□□□ 1.79
C12orf56-207ENST00000543942 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
C12orf56-207ENST00000543942 ACIN1Q9UKV3 1341 aaKnown RBP26.19■■□□□ 1.78
C12orf56-207ENST00000543942 UBTFP17480 764 aaKnown RBP26.11■■□□□ 1.77
C12orf56-207ENST00000543942 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
C12orf56-207ENST00000543942 NACADO15069 1562 aa26.04■■□□□ 1.76
C12orf56-207ENST00000543942 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
C12orf56-207ENST00000543942 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
C12orf56-207ENST00000543942 YTHDC1Q96MU7 727 aaKnown RBP25.99■■□□□ 1.75
C12orf56-207ENST00000543942 CENPBP07199 599 aaPredicted RBP25.97■■□□□ 1.75
C12orf56-207ENST00000543942 SOGA1O94964 1423 aa25.96■■□□□ 1.75
C12orf56-207ENST00000543942 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
C12orf56-207ENST00000543942 HNRNPUL2Q1KMD3 747 aaKnown RBP25.9■■□□□ 1.74
C12orf56-207ENST00000543942 RANGAP1P46060 587 aaPredicted RBP25.9■■□□□ 1.74
C12orf56-207ENST00000543942 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
C12orf56-207ENST00000543942 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
C12orf56-207ENST00000543942 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
C12orf56-207ENST00000543942 ZNF316A6NFI3 1004 aaPredicted RBP25.78■■□□□ 1.72
C12orf56-207ENST00000543942 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
C12orf56-207ENST00000543942 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
C12orf56-207ENST00000543942 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
C12orf56-207ENST00000543942 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
C12orf56-207ENST00000543942 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
C12orf56-207ENST00000543942 MIER1Q8N108 512 aa25.64■■□□□ 1.69
C12orf56-207ENST00000543942 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
C12orf56-207ENST00000543942 SMARCA4P51532 1647 aa25.56■■□□□ 1.68
C12orf56-207ENST00000543942 APLP2Q06481 763 aa25.55■■□□□ 1.68
C12orf56-207ENST00000543942 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
C12orf56-207ENST00000543942 EEA1Q15075 1411 aa25.43■■□□□ 1.66
C12orf56-207ENST00000543942 CLIP1P30622 1438 aa25.39■■□□□ 1.65
C12orf56-207ENST00000543942 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
C12orf56-207ENST00000543942 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
C12orf56-207ENST00000543942 SYNJ1O43426 1573 aa25.2■■□□□ 1.62
C12orf56-207ENST00000543942 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
C12orf56-207ENST00000543942 VPS8Q8N3P4 1428 aa25.19■■□□□ 1.62
C12orf56-207ENST00000543942 ITGAEP38570 1179 aa25.18■■□□□ 1.62
C12orf56-207ENST00000543942 KANK4Q5T7N3 995 aaPredicted RBP25.1■■□□□ 1.61
C12orf56-207ENST00000543942 KIF21BO75037 1637 aa25.01■■□□□ 1.59
C12orf56-207ENST00000543942 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
C12orf56-207ENST00000543942 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
C12orf56-207ENST00000543942 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.59
C12orf56-207ENST00000543942 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
C12orf56-207ENST00000543942 MYT1Q01538 1121 aa24.93■■□□□ 1.58
C12orf56-207ENST00000543942 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
C12orf56-207ENST00000543942 KCNH8Q96L42 1107 aa24.86■■□□□ 1.57
C12orf56-207ENST00000543942 BCANQ96GW7 911 aa24.77■■□□□ 1.56
C12orf56-207ENST00000543942 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
C12orf56-207ENST00000543942 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
C12orf56-207ENST00000543942 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
C12orf56-207ENST00000543942 CLSPNQ9HAW4 1339 aa24.75■■□□□ 1.55
C12orf56-207ENST00000543942 HIRIP3Q9BW71 556 aaPredicted RBP24.69■■□□□ 1.54
C12orf56-207ENST00000543942 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
C12orf56-207ENST00000543942 DDX10Q13206 875 aaKnown RBP24.67■■□□□ 1.54
C12orf56-207ENST00000543942 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
C12orf56-207ENST00000543942 PRXQ9BXM0 1461 aa24.66■■□□□ 1.54
C12orf56-207ENST00000543942 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
C12orf56-207ENST00000543942 FAM50AQ14320 339 aaKnown RBP24.66■■□□□ 1.54
C12orf56-207ENST00000543942 SIN3AQ96ST3 1273 aa24.66■■□□□ 1.54
C12orf56-207ENST00000543942 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
C12orf56-207ENST00000543942 TSHZ2Q9NRE2 1034 aa24.59■■□□□ 1.53
C12orf56-207ENST00000543942 RAB3GAP2Q9H2M9 1393 aa24.59■■□□□ 1.53
C12orf56-207ENST00000543942 RRBP1Q9P2E9 1410 aaKnown RBP24.57■■□□□ 1.52
C12orf56-207ENST00000543942 FKBP8Q14318 412 aa24.52■■□□□ 1.52
C12orf56-207ENST00000543942 ERICH3Q5RHP9 1530 aa24.52■■□□□ 1.52
C12orf56-207ENST00000543942 ARHGAP35Q9NRY4 1499 aa24.52■■□□□ 1.52
C12orf56-207ENST00000543942 CUX1P39880 1505 aa24.51■■□□□ 1.51
C12orf56-207ENST00000543942 TRIM52Q96A61 297 aa24.47■■□□□ 1.51
C12orf56-207ENST00000543942 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
C12orf56-207ENST00000543942 CUX2O14529 1486 aa24.39■■□□□ 1.49
C12orf56-207ENST00000543942 SETD5Q9C0A6 1442 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms