RNA–Protein interactions for RNA: ENST00000425497.5

SMIM25-203, Transcript of small integral membrane protein 25, humanhuman

TSL 1 (best) BASIC

Gene SMIM25, Length 2,010 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM25-203ENST00000425497 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
SMIM25-203ENST00000425497 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
SMIM25-203ENST00000425497 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
SMIM25-203ENST00000425497 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
SMIM25-203ENST00000425497 ABCC9O60706 1549 aa29.83■■■□□ 2.37
SMIM25-203ENST00000425497 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
SMIM25-203ENST00000425497 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
SMIM25-203ENST00000425497 NACADO15069 1562 aa29.45■■■□□ 2.31
SMIM25-203ENST00000425497 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
SMIM25-203ENST00000425497 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
SMIM25-203ENST00000425497 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
SMIM25-203ENST00000425497 PELP1Q8IZL8 1130 aaKnown RBP28.9■■■□□ 2.22
SMIM25-203ENST00000425497 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
SMIM25-203ENST00000425497 HRCP23327 699 aa28.55■■■□□ 2.16
SMIM25-203ENST00000425497 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.12
SMIM25-203ENST00000425497 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.11
SMIM25-203ENST00000425497 MYT1Q01538 1121 aa28.11■■■□□ 2.09
SMIM25-203ENST00000425497 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
SMIM25-203ENST00000425497 CECR2Q9BXF3 1484 aa28.05■■■□□ 2.08
SMIM25-203ENST00000425497 RSF1Q96T23 1441 aaPredicted RBP28.02■■■□□ 2.08
SMIM25-203ENST00000425497 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
SMIM25-203ENST00000425497 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
SMIM25-203ENST00000425497 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
SMIM25-203ENST00000425497 WIZO95785 1651 aa27.7■■■□□ 2.03
SMIM25-203ENST00000425497 PEG3Q9GZU2 1588 aa27.51■■■□□ 2
SMIM25-203ENST00000425497 PPARGC1BQ86YN6 1023 aaKnown RBP27.51■■□□□ 1.99
SMIM25-203ENST00000425497 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
SMIM25-203ENST00000425497 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
SMIM25-203ENST00000425497 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
SMIM25-203ENST00000425497 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
SMIM25-203ENST00000425497 SCAF1Q9H7N4 1312 aaKnown RBP27.28■■□□□ 1.96
SMIM25-203ENST00000425497 PCGF6Q9BYE7 350 aa27.23■■□□□ 1.95
SMIM25-203ENST00000425497 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
SMIM25-203ENST00000425497 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
SMIM25-203ENST00000425497 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
SMIM25-203ENST00000425497 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
SMIM25-203ENST00000425497 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
SMIM25-203ENST00000425497 CC2D2AQ9P2K1 1620 aa27.03■■□□□ 1.92
SMIM25-203ENST00000425497 TTBK1Q5TCY1 1321 aaPredicted RBP26.74■■□□□ 1.87
SMIM25-203ENST00000425497 ZEB1P37275 1124 aaPredicted RBP26.69■■□□□ 1.86
SMIM25-203ENST00000425497 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
SMIM25-203ENST00000425497 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
SMIM25-203ENST00000425497 CFTRP13569 1480 aa26.52■■□□□ 1.84
SMIM25-203ENST00000425497 TRIM26Q12899 539 aaPredicted RBP26.49■■□□□ 1.83
SMIM25-203ENST00000425497 PRDM2Q13029 1718 aa26.48■■□□□ 1.83
SMIM25-203ENST00000425497 ACIN1Q9UKV3 1341 aaKnown RBP26.48■■□□□ 1.83
SMIM25-203ENST00000425497 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
SMIM25-203ENST00000425497 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
SMIM25-203ENST00000425497 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
SMIM25-203ENST00000425497 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
SMIM25-203ENST00000425497 LAMC3Q9Y6N6 1575 aa26.26■■□□□ 1.8
SMIM25-203ENST00000425497 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
SMIM25-203ENST00000425497 TOP2BQ02880 1626 aa26.22■■□□□ 1.79
SMIM25-203ENST00000425497 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
SMIM25-203ENST00000425497 NESP48681 1621 aa26.16■■□□□ 1.78
SMIM25-203ENST00000425497 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
SMIM25-203ENST00000425497 GTF3C3Q9Y5Q9 886 aa26.12■■□□□ 1.77
SMIM25-203ENST00000425497 CUX1P39880 1505 aa26.12■■□□□ 1.77
SMIM25-203ENST00000425497 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
SMIM25-203ENST00000425497 EEA1Q15075 1411 aa26.07■■□□□ 1.76
SMIM25-203ENST00000425497 PDS5BQ9NTI5 1447 aa26.04■■□□□ 1.76
SMIM25-203ENST00000425497 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
SMIM25-203ENST00000425497 SOGA1O94964 1423 aa26■■□□□ 1.75
SMIM25-203ENST00000425497 CENPBP07199 599 aaPredicted RBP26■■□□□ 1.75
SMIM25-203ENST00000425497 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
SMIM25-203ENST00000425497 DNMBPQ6XZF7 1577 aa25.94■■□□□ 1.74
SMIM25-203ENST00000425497 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
SMIM25-203ENST00000425497 RUSC2Q8N2Y8 1516 aa25.89■■□□□ 1.73
SMIM25-203ENST00000425497 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
SMIM25-203ENST00000425497 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
SMIM25-203ENST00000425497 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.73
SMIM25-203ENST00000425497 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
SMIM25-203ENST00000425497 BCL11AQ9H165 835 aa25.78■■□□□ 1.72
SMIM25-203ENST00000425497 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
SMIM25-203ENST00000425497 KIF21BO75037 1637 aa25.72■■□□□ 1.71
SMIM25-203ENST00000425497 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
SMIM25-203ENST00000425497 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
SMIM25-203ENST00000425497 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
SMIM25-203ENST00000425497 CUX2O14529 1486 aa25.67■■□□□ 1.7
SMIM25-203ENST00000425497 EHMT2Q96KQ7 1210 aa25.67■■□□□ 1.7
SMIM25-203ENST00000425497 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.69
SMIM25-203ENST00000425497 ERCC6Q03468 1493 aa25.62■■□□□ 1.69
SMIM25-203ENST00000425497 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
SMIM25-203ENST00000425497 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
SMIM25-203ENST00000425497 WDR62O43379 1518 aa25.58■■□□□ 1.69
SMIM25-203ENST00000425497 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
SMIM25-203ENST00000425497 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
SMIM25-203ENST00000425497 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
SMIM25-203ENST00000425497 DIEXFQ68CQ4 756 aaKnown RBP25.51■■□□□ 1.67
SMIM25-203ENST00000425497 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
SMIM25-203ENST00000425497 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
SMIM25-203ENST00000425497 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
SMIM25-203ENST00000425497 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
SMIM25-203ENST00000425497 IGF1RP08069 1367 aa25.47■■□□□ 1.67
SMIM25-203ENST00000425497 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.66
SMIM25-203ENST00000425497 CEP162Q5TB80 1403 aa25.41■■□□□ 1.66
SMIM25-203ENST00000425497 ANP32EQ9BTT0 268 aa25.41■■□□□ 1.66
SMIM25-203ENST00000425497 CUL7Q14999 1698 aa25.39■■□□□ 1.66
SMIM25-203ENST00000425497 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
SMIM25-203ENST00000425497 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms