RNA–Protein interactions for RNA: ENST00000366839.8

SRP9-203, Transcript of signal recognition particle 9, humanhuman

TSL 1 (best) BASIC

Gene SRP9, Length 1,596 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-203ENST00000366839 NISCHQ9Y2I1 1504 aa44.32■■■■■ 4.69
SRP9-203ENST00000366839 CCDC180Q9P1Z9 1646 aa39.2■■■■□ 3.87
SRP9-203ENST00000366839 ABCC9O60706 1549 aa38.33■■■■□ 3.73
SRP9-203ENST00000366839 DCAF8L2P0C7V8 631 aa37.06■■■■□ 3.52
SRP9-203ENST00000366839 ZCCHC6Q5VYS8 1495 aaKnown RBP36.96■■■■□ 3.51
SRP9-203ENST00000366839 NACADO15069 1562 aa36.88■■■■□ 3.49
SRP9-203ENST00000366839 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
SRP9-203ENST00000366839 MYO15BQ96JP2 1530 aa36.71■■■■□ 3.47
SRP9-203ENST00000366839 DCAF1Q9Y4B6 1507 aa36.63■■■■□ 3.45
SRP9-203ENST00000366839 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
SRP9-203ENST00000366839 PABPN1Q86U42 306 aaKnown RBP eCLIP35.91■■■■□ 3.34
SRP9-203ENST00000366839 SCRIBQ14160 1630 aa35.89■■■■□ 3.34
SRP9-203ENST00000366839 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
SRP9-203ENST00000366839 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
SRP9-203ENST00000366839 DNAJC5BQ9UF47 199 aa35.05■■■■□ 3.2
SRP9-203ENST00000366839 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
SRP9-203ENST00000366839 CC2D2AQ9P2K1 1620 aa34.62■■■■□ 3.13
SRP9-203ENST00000366839 CECR2Q9BXF3 1484 aa34.55■■■■□ 3.12
SRP9-203ENST00000366839 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
SRP9-203ENST00000366839 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
SRP9-203ENST00000366839 MROH2BQ7Z745 1585 aa34.18■■■■□ 3.06
SRP9-203ENST00000366839 ATAD2BQ9ULI0 1458 aa34.13■■■■□ 3.05
SRP9-203ENST00000366839 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
SRP9-203ENST00000366839 SMARCA2P51531 1590 aa34.05■■■■□ 3.04
SRP9-203ENST00000366839 PEG3Q9GZU2 1588 aa33.97■■■■□ 3.03
SRP9-203ENST00000366839 RSF1Q96T23 1441 aaPredicted RBP33.88■■■■□ 3.01
SRP9-203ENST00000366839 HMGXB3Q12766 1538 aa33.88■■■■□ 3.01
SRP9-203ENST00000366839 BAZ1BQ9UIG0 1483 aaKnown RBP33.85■■■■□ 3.01
SRP9-203ENST00000366839 WIZO95785 1651 aa33.77■■■■□ 3
SRP9-203ENST00000366839 TOP2AP11388 1531 aaKnown RBP33.43■■■□□ 2.94
SRP9-203ENST00000366839 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
SRP9-203ENST00000366839 NESP48681 1621 aa33.23■■■□□ 2.91
SRP9-203ENST00000366839 CADPSQ9ULU8 1353 aa33.11■■■□□ 2.89
SRP9-203ENST00000366839 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
SRP9-203ENST00000366839 CCDC88BA6NC98 1476 aa33.08■■■□□ 2.89
SRP9-203ENST00000366839 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
SRP9-203ENST00000366839 CFTRP13569 1480 aa32.94■■■□□ 2.86
SRP9-203ENST00000366839 PDS5BQ9NTI5 1447 aa32.91■■■□□ 2.86
SRP9-203ENST00000366839 FANCD2Q9BXW9 1451 aa32.73■■■□□ 2.83
SRP9-203ENST00000366839 KIF21AQ7Z4S6 1674 aa32.73■■■□□ 2.83
SRP9-203ENST00000366839 CEP164Q9UPV0 1460 aa32.65■■■□□ 2.82
SRP9-203ENST00000366839 THOC2Q8NI27 1593 aaKnown RBP32.6■■■□□ 2.81
SRP9-203ENST00000366839 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
SRP9-203ENST00000366839 CUX2O14529 1486 aa32.55■■■□□ 2.8
SRP9-203ENST00000366839 PRDM2Q13029 1718 aa32.53■■■□□ 2.8
SRP9-203ENST00000366839 WDR62O43379 1518 aa32.43■■■□□ 2.78
SRP9-203ENST00000366839 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.77
SRP9-203ENST00000366839 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
SRP9-203ENST00000366839 ABCC8Q09428 1581 aa32.18■■■□□ 2.74
SRP9-203ENST00000366839 DNMBPQ6XZF7 1577 aa32.16■■■□□ 2.74
SRP9-203ENST00000366839 CUX1P39880 1505 aa32.05■■■□□ 2.72
SRP9-203ENST00000366839 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
SRP9-203ENST00000366839 IFT140Q96RY7 1462 aa31.96■■■□□ 2.71
SRP9-203ENST00000366839 WRNQ14191 1432 aaPredicted RBP eCLIP31.93■■■□□ 2.7
SRP9-203ENST00000366839 FGD5Q6ZNL6 1462 aa31.92■■■□□ 2.7
SRP9-203ENST00000366839 SOGA1O94964 1423 aa31.85■■■□□ 2.69
SRP9-203ENST00000366839 RAD54L2Q9Y4B4 1467 aa31.85■■■□□ 2.69
SRP9-203ENST00000366839 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
SRP9-203ENST00000366839 SYNJ1O43426 1573 aa31.81■■■□□ 2.68
SRP9-203ENST00000366839 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
SRP9-203ENST00000366839 TOP2BQ02880 1626 aa31.78■■■□□ 2.68
SRP9-203ENST00000366839 BIVM-ERCC5R4GMW8 1640 aa31.74■■■□□ 2.67
SRP9-203ENST00000366839 AQRO60306 1485 aaKnown RBP eCLIP31.69■■■□□ 2.665e-11■□□□□ 10.8
SRP9-203ENST00000366839 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
SRP9-203ENST00000366839 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
SRP9-203ENST00000366839 ABCA10Q8WWZ4 1543 aa31.6■■■□□ 2.65
SRP9-203ENST00000366839 WDR97A6NE52 1622 aa31.54■■■□□ 2.64
SRP9-203ENST00000366839 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
SRP9-203ENST00000366839 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
SRP9-203ENST00000366839 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
SRP9-203ENST00000366839 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
SRP9-203ENST00000366839 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
SRP9-203ENST00000366839 TRIM41Q8WV44 630 aa31.35■■■□□ 2.61
SRP9-203ENST00000366839 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
SRP9-203ENST00000366839 FBLN2P98095 1184 aa31.3■■■□□ 2.6
SRP9-203ENST00000366839 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
SRP9-203ENST00000366839 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
SRP9-203ENST00000366839 KIF27Q86VH2 1401 aa31.25■■■□□ 2.59
SRP9-203ENST00000366839 CHMP7Q8WUX9 453 aaPredicted RBP31.22■■■□□ 2.59
SRP9-203ENST00000366839 SYNJ2O15056 1496 aa31.2■■■□□ 2.59
SRP9-203ENST00000366839 ERICH3Q5RHP9 1530 aa31.2■■■□□ 2.59
SRP9-203ENST00000366839 CHD1O14646 1710 aa31.16■■■□□ 2.58
SRP9-203ENST00000366839 IGF1RP08069 1367 aa31.12■■■□□ 2.57
SRP9-203ENST00000366839 FHAD1B1AJZ9 1412 aa31.12■■■□□ 2.57
SRP9-203ENST00000366839 ADAMTS12P58397 1594 aa31.12■■■□□ 2.57
SRP9-203ENST00000366839 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
SRP9-203ENST00000366839 RUSC2Q8N2Y8 1516 aa31.05■■■□□ 2.56
SRP9-203ENST00000366839 GRIN2AQ12879 1464 aa31.03■■■□□ 2.56
SRP9-203ENST00000366839 CARMIL1Q5VZK9 1371 aa30.93■■■□□ 2.54
SRP9-203ENST00000366839 CUL7Q14999 1698 aa30.91■■■□□ 2.54
SRP9-203ENST00000366839 NUP160Q12769 1436 aa30.89■■■□□ 2.54
SRP9-203ENST00000366839 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
SRP9-203ENST00000366839 CEP170Q5SW79 1584 aa30.85■■■□□ 2.53
SRP9-203ENST00000366839 ARHGEF11O15085 1522 aa30.75■■■□□ 2.51
SRP9-203ENST00000366839 RAPGEF2Q9Y4G8 1499 aa30.74■■■□□ 2.51
SRP9-203ENST00000366839 EEA1Q15075 1411 aa30.74■■■□□ 2.51
SRP9-203ENST00000366839 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
SRP9-203ENST00000366839 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
SRP9-203ENST00000366839 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.5
SRP9-203ENST00000366839 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms