RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
PCDHA12-201ENST00000398631 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
PCDHA12-201ENST00000398631 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
PCDHA12-201ENST00000398631 SHROOM4Q9ULL8 1493 aa26.39■■□□□ 1.82
PCDHA12-201ENST00000398631 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
PCDHA12-201ENST00000398631 APLP2Q06481 763 aa25.63■■□□□ 1.69
PCDHA12-201ENST00000398631 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
PCDHA12-201ENST00000398631 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
PCDHA12-201ENST00000398631 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
PCDHA12-201ENST00000398631 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
PCDHA12-201ENST00000398631 RANGAP1P46060 587 aaPredicted RBP24.89■■□□□ 1.58
PCDHA12-201ENST00000398631 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
PCDHA12-201ENST00000398631 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
PCDHA12-201ENST00000398631 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
PCDHA12-201ENST00000398631 CCER1Q8TC90 406 aaPredicted RBP24.54■■□□□ 1.52
PCDHA12-201ENST00000398631 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
PCDHA12-201ENST00000398631 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
PCDHA12-201ENST00000398631 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
PCDHA12-201ENST00000398631 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.44
PCDHA12-201ENST00000398631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.96■■□□□ 1.43
PCDHA12-201ENST00000398631 HNRNPUL2Q1KMD3 747 aaKnown RBP23.96■■□□□ 1.43
PCDHA12-201ENST00000398631 NEFLP07196 543 aa23.94■■□□□ 1.42
PCDHA12-201ENST00000398631 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
PCDHA12-201ENST00000398631 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
PCDHA12-201ENST00000398631 ITGAEP38570 1179 aa23.83■■□□□ 1.41
PCDHA12-201ENST00000398631 MYT1Q01538 1121 aa23.81■■□□□ 1.4
PCDHA12-201ENST00000398631 YTHDC1Q96MU7 727 aaKnown RBP23.8■■□□□ 1.4
PCDHA12-201ENST00000398631 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
PCDHA12-201ENST00000398631 LOC105371045A0A1W2PR82 267 aa23.7■■□□□ 1.38
PCDHA12-201ENST00000398631 ABCC9O60706 1549 aa23.61■■□□□ 1.37
PCDHA12-201ENST00000398631 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
PCDHA12-201ENST00000398631 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
PCDHA12-201ENST00000398631 HRCP23327 699 aa23.46■■□□□ 1.35
PCDHA12-201ENST00000398631 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
PCDHA12-201ENST00000398631 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
PCDHA12-201ENST00000398631 SLC4A1APQ9BWU0 796 aaKnown RBP23.21■■□□□ 1.31
PCDHA12-201ENST00000398631 DAXXQ9UER7 740 aaPredicted RBP23.2■■□□□ 1.3
PCDHA12-201ENST00000398631 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
PCDHA12-201ENST00000398631 FBLN2P98095 1184 aa23.08■■□□□ 1.29
PCDHA12-201ENST00000398631 DIEXFQ68CQ4 756 aaKnown RBP22.96■■□□□ 1.27
PCDHA12-201ENST00000398631 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
PCDHA12-201ENST00000398631 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
PCDHA12-201ENST00000398631 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
PCDHA12-201ENST00000398631 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
PCDHA12-201ENST00000398631 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
PCDHA12-201ENST00000398631 ARID3CA6NKF2 412 aa22.71■■□□□ 1.23
PCDHA12-201ENST00000398631 ANP32CO43423 234 aa22.7■■□□□ 1.22
PCDHA12-201ENST00000398631 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
PCDHA12-201ENST00000398631 ZNF316A6NFI3 1004 aaPredicted RBP22.64■■□□□ 1.21
PCDHA12-201ENST00000398631 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
PCDHA12-201ENST00000398631 ZNF777Q9ULD5 760 aaPredicted RBP22.61■■□□□ 1.21
PCDHA12-201ENST00000398631 BCANQ96GW7 911 aa22.56■■□□□ 1.2
PCDHA12-201ENST00000398631 RTL5Q5HYW3 569 aaPredicted RBP22.54■■□□□ 1.2
PCDHA12-201ENST00000398631 ZBTB47Q9UFB7 747 aaPredicted RBP22.51■■□□□ 1.19
PCDHA12-201ENST00000398631 NEFMP07197 916 aa22.48■■□□□ 1.19
PCDHA12-201ENST00000398631 ESF1Q9H501 851 aaKnown RBP22.43■■□□□ 1.18
PCDHA12-201ENST00000398631 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
PCDHA12-201ENST00000398631 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
PCDHA12-201ENST00000398631 NPM1P06748 294 aaKnown RBP eCLIP22.4■■□□□ 1.18
PCDHA12-201ENST00000398631 CANXP27824 592 aaKnown RBP22.37■■□□□ 1.17
PCDHA12-201ENST00000398631 GTF3C3Q9Y5Q9 886 aa22.29■■□□□ 1.16
PCDHA12-201ENST00000398631 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
PCDHA12-201ENST00000398631 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
PCDHA12-201ENST00000398631 TONSLQ96HA7 1378 aa22.27■■□□□ 1.16
PCDHA12-201ENST00000398631 BCL11AQ9H165 835 aa22.21■■□□□ 1.15
PCDHA12-201ENST00000398631 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
PCDHA12-201ENST00000398631 TSPY4P0CV99 314 aa22.14■■□□□ 1.13
PCDHA12-201ENST00000398631 TSPY10P0CW01 314 aa22.14■■□□□ 1.13
PCDHA12-201ENST00000398631 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
PCDHA12-201ENST00000398631 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
PCDHA12-201ENST00000398631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.13
PCDHA12-201ENST00000398631 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
PCDHA12-201ENST00000398631 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.13
PCDHA12-201ENST00000398631 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
PCDHA12-201ENST00000398631 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
PCDHA12-201ENST00000398631 DDX10Q13206 875 aaKnown RBP21.99■■□□□ 1.11
PCDHA12-201ENST00000398631 ACIN1Q9UKV3 1341 aaKnown RBP21.99■■□□□ 1.11
PCDHA12-201ENST00000398631 CLIP1P30622 1438 aa21.96■■□□□ 1.11
PCDHA12-201ENST00000398631 HNRNPUQ00839 825 aaKnown RBP eCLIP21.95■■□□□ 1.11
PCDHA12-201ENST00000398631 ANP32AP39687 249 aaKnown RBP21.94■■□□□ 1.1
PCDHA12-201ENST00000398631 FAM9BQ8IZU0 186 aa21.93■■□□□ 1.1
PCDHA12-201ENST00000398631 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
PCDHA12-201ENST00000398631 TMC1Q8TDI8 760 aa21.9■■□□□ 1.1
PCDHA12-201ENST00000398631 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
PCDHA12-201ENST00000398631 EEA1Q15075 1411 aa21.86■■□□□ 1.09
PCDHA12-201ENST00000398631 SALL2Q9Y467 1007 aaPredicted RBP21.84■■□□□ 1.09
PCDHA12-201ENST00000398631 FKBP8Q14318 412 aa21.83■■□□□ 1.09
PCDHA12-201ENST00000398631 KCNH8Q96L42 1107 aa21.83■■□□□ 1.08
PCDHA12-201ENST00000398631 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
PCDHA12-201ENST00000398631 NPM2Q86SE8 214 aaKnown RBP21.82■■□□□ 1.08
PCDHA12-201ENST00000398631 WDR43Q15061 677 aaKnown RBP eCLIP21.81■■□□□ 1.08
PCDHA12-201ENST00000398631 RRP7BPQ9NSQ0 103 aa21.79■■□□□ 1.08
PCDHA12-201ENST00000398631 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 BAZ1BQ9UIG0 1483 aaKnown RBP21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 UPF2Q9HAU5 1272 aaKnown RBP21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 NACADO15069 1562 aa21.76■■□□□ 1.07
PCDHA12-201ENST00000398631 HSP90AA1P07900 732 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms