RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
CDH6-205ENST00000514738 MYT1Q01538 1121 aa28.98■■■□□ 2.23
CDH6-205ENST00000514738 TTBK1Q5TCY1 1321 aaPredicted RBP27.81■■■□□ 2.04
CDH6-205ENST00000514738 HRCP23327 699 aa27.63■■■□□ 2.01
CDH6-205ENST00000514738 PRKCSHP14314 528 aaPredicted RBP27.26■■□□□ 1.95
CDH6-205ENST00000514738 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
CDH6-205ENST00000514738 PPARGC1BQ86YN6 1023 aaKnown RBP26.9■■□□□ 1.9
CDH6-205ENST00000514738 BCL11AQ9H165 835 aa26.77■■□□□ 1.88
CDH6-205ENST00000514738 ERICH6Q7L0X2 663 aa26.6■■□□□ 1.85
CDH6-205ENST00000514738 APLP2Q06481 763 aa26.53■■□□□ 1.84
CDH6-205ENST00000514738 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
CDH6-205ENST00000514738 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.77
CDH6-205ENST00000514738 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
CDH6-205ENST00000514738 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
CDH6-205ENST00000514738 ACIN1Q9UKV3 1341 aaKnown RBP25.93■■□□□ 1.74
CDH6-205ENST00000514738 GTF3C3Q9Y5Q9 886 aa25.79■■□□□ 1.72
CDH6-205ENST00000514738 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
CDH6-205ENST00000514738 ANP32EQ9BTT0 268 aa25.52■■□□□ 1.68
CDH6-205ENST00000514738 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
CDH6-205ENST00000514738 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
CDH6-205ENST00000514738 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
CDH6-205ENST00000514738 DAXXQ9UER7 740 aaPredicted RBP25.1■■□□□ 1.61
CDH6-205ENST00000514738 EIF5BO60841 1220 aaKnown RBP25.01■■□□□ 1.59
CDH6-205ENST00000514738 ANO8Q9HCE9 1232 aaPredicted RBP24.89■■□□□ 1.58
CDH6-205ENST00000514738 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
CDH6-205ENST00000514738 UBE2Q2Q8WVN8 375 aa24.77■■□□□ 1.56
CDH6-205ENST00000514738 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
CDH6-205ENST00000514738 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
CDH6-205ENST00000514738 PLEKHG5O94827 1062 aa24.54■■□□□ 1.52
CDH6-205ENST00000514738 TSHZ2Q9NRE2 1034 aa24.52■■□□□ 1.52
CDH6-205ENST00000514738 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
CDH6-205ENST00000514738 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
CDH6-205ENST00000514738 SALL2Q9Y467 1007 aaPredicted RBP24.34■■□□□ 1.49
CDH6-205ENST00000514738 CCDC136Q96JN2 1154 aa24.24■■□□□ 1.47
CDH6-205ENST00000514738 PKNOX2Q96KN3 472 aa24.21■■□□□ 1.47
CDH6-205ENST00000514738 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
CDH6-205ENST00000514738 PODXL2Q9NZ53 605 aa24.2■■□□□ 1.47
CDH6-205ENST00000514738 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
CDH6-205ENST00000514738 SUPT16HQ9Y5B9 1047 aaKnown RBP24.1■■□□□ 1.45
CDH6-205ENST00000514738 ERICH6BQ5W0A0 696 aa24.06■■□□□ 1.44
CDH6-205ENST00000514738 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
CDH6-205ENST00000514738 MYT1LQ9UL68 1186 aa23.93■■□□□ 1.42
CDH6-205ENST00000514738 DEKP35659 375 aaKnown RBP23.89■■□□□ 1.41
CDH6-205ENST00000514738 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
CDH6-205ENST00000514738 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
CDH6-205ENST00000514738 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.82■■□□□ 1.4
CDH6-205ENST00000514738 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
CDH6-205ENST00000514738 RBM19Q9Y4C8 960 aaKnown RBP23.76■■□□□ 1.39
CDH6-205ENST00000514738 MSH5O43196 834 aa23.76■■□□□ 1.39
CDH6-205ENST00000514738 MIER1Q8N108 512 aa23.63■■□□□ 1.37
CDH6-205ENST00000514738 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
CDH6-205ENST00000514738 CCER1Q8TC90 406 aaPredicted RBP23.53■■□□□ 1.36
CDH6-205ENST00000514738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
CDH6-205ENST00000514738 NEFLP07196 543 aa23.46■■□□□ 1.35
CDH6-205ENST00000514738 IL27Q8NEV9 243 aa23.44■■□□□ 1.34
CDH6-205ENST00000514738 RTN4Q9NQC3 1192 aaKnown RBP23.41■■□□□ 1.34
CDH6-205ENST00000514738 FANCIQ9NVI1 1328 aa23.38■■□□□ 1.33
CDH6-205ENST00000514738 PDE4CQ08493 712 aa23.27■■□□□ 1.32
CDH6-205ENST00000514738 BCANQ96GW7 911 aa23.27■■□□□ 1.32
CDH6-205ENST00000514738 ZMYND15Q9H091 742 aa23.26■■□□□ 1.31
CDH6-205ENST00000514738 PDIA4P13667 645 aaKnown RBP23.19■■□□□ 1.3
CDH6-205ENST00000514738 GLIPR1L2Q4G1C9 344 aa23.19■■□□□ 1.3
CDH6-205ENST00000514738 FGD1P98174 961 aa23.15■■□□□ 1.3
CDH6-205ENST00000514738 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
CDH6-205ENST00000514738 A0A0U1RQG5 324 aaPredicted RBP23.1■■□□□ 1.29
CDH6-205ENST00000514738 VSIG10Q8N0Z9 540 aa23.08■■□□□ 1.29
CDH6-205ENST00000514738 FKBP8Q14318 412 aa23.03■■□□□ 1.28
CDH6-205ENST00000514738 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
CDH6-205ENST00000514738 NBR1Q14596 966 aa23.02■■□□□ 1.28
CDH6-205ENST00000514738 KLHL34Q8N239 644 aa23■■□□□ 1.27
CDH6-205ENST00000514738 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
CDH6-205ENST00000514738 AAMPQ13685 434 aa23■■□□□ 1.27
CDH6-205ENST00000514738 BCL11BQ9C0K0 894 aaPredicted RBP22.97■■□□□ 1.27
CDH6-205ENST00000514738 RBM10P98175 930 aaKnown RBP22.96■■□□□ 1.27
CDH6-205ENST00000514738 ITGAEP38570 1179 aa22.91■■□□□ 1.26
CDH6-205ENST00000514738 NCBP3Q53F19 620 aaKnown RBP22.87■■□□□ 1.25
CDH6-205ENST00000514738 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
CDH6-205ENST00000514738 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.24
CDH6-205ENST00000514738 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
CDH6-205ENST00000514738 NOP58Q9Y2X3 529 aaKnown RBP22.78■■□□□ 1.24
CDH6-205ENST00000514738 C11orf95C9JLR9 678 aaPredicted RBP22.78■■□□□ 1.24
CDH6-205ENST00000514738 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
CDH6-205ENST00000514738 TAF7LQ5H9L4 462 aa22.68■■□□□ 1.22
CDH6-205ENST00000514738 PAK3O75914 559 aaPredicted RBP22.65■■□□□ 1.22
CDH6-205ENST00000514738 ARXQ96QS3 562 aa22.64■■□□□ 1.22
CDH6-205ENST00000514738 BRPF3Q9ULD4 1205 aa22.56■■□□□ 1.2
CDH6-205ENST00000514738 WASHC2AQ641Q2 1341 aa22.56■■□□□ 1.2
CDH6-205ENST00000514738 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
CDH6-205ENST00000514738 HSP90AA2PQ14568 343 aaPredicted RBP22.41■■□□□ 1.18
CDH6-205ENST00000514738 RRP9O43818 475 aaKnown RBP22.37■■□□□ 1.17
CDH6-205ENST00000514738 FAM43AQ8N2R8 423 aa22.34■■□□□ 1.17
CDH6-205ENST00000514738 PAXIP1Q6ZW49 1069 aaPredicted RBP22.34■■□□□ 1.17
CDH6-205ENST00000514738 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
CDH6-205ENST00000514738 NEFMP07197 916 aa22.32■■□□□ 1.16
CDH6-205ENST00000514738 USP35Q9P2H5 1018 aa22.3■■□□□ 1.16
CDH6-205ENST00000514738 IPO9Q96P70 1041 aaKnown RBP22.26■■□□□ 1.15
CDH6-205ENST00000514738 ZBTB47Q9UFB7 747 aaPredicted RBP22.26■■□□□ 1.15
CDH6-205ENST00000514738 NAP1L2Q9ULW6 460 aaPredicted RBP22.25■■□□□ 1.15
CDH6-205ENST00000514738 RSPH4AQ5TD94 716 aa22.21■■□□□ 1.15
CDH6-205ENST00000514738 PRDM4Q9UKN5 801 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms