RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
SCUBE2-202ENST00000450649 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
SCUBE2-202ENST00000450649 HRCP23327 699 aa28.97■■■□□ 2.23
SCUBE2-202ENST00000450649 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
SCUBE2-202ENST00000450649 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
SCUBE2-202ENST00000450649 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.2
SCUBE2-202ENST00000450649 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
SCUBE2-202ENST00000450649 PCGF6Q9BYE7 350 aa28.42■■■□□ 2.14
SCUBE2-202ENST00000450649 PPARGC1BQ86YN6 1023 aaKnown RBP28.33■■■□□ 2.13
SCUBE2-202ENST00000450649 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
SCUBE2-202ENST00000450649 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
SCUBE2-202ENST00000450649 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
SCUBE2-202ENST00000450649 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
SCUBE2-202ENST00000450649 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
SCUBE2-202ENST00000450649 TRIM26Q12899 539 aaPredicted RBP27.58■■■□□ 2.01
SCUBE2-202ENST00000450649 ABCC9O60706 1549 aa27.33■■□□□ 1.96
SCUBE2-202ENST00000450649 ZEB1P37275 1124 aaPredicted RBP27.32■■□□□ 1.96
SCUBE2-202ENST00000450649 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
SCUBE2-202ENST00000450649 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
SCUBE2-202ENST00000450649 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
SCUBE2-202ENST00000450649 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
SCUBE2-202ENST00000450649 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
SCUBE2-202ENST00000450649 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
SCUBE2-202ENST00000450649 NACADO15069 1562 aa26.64■■□□□ 1.85
SCUBE2-202ENST00000450649 NEUROD1Q13562 356 aa26.62■■□□□ 1.85
SCUBE2-202ENST00000450649 MYT1Q01538 1121 aa26.61■■□□□ 1.85
SCUBE2-202ENST00000450649 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
SCUBE2-202ENST00000450649 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
SCUBE2-202ENST00000450649 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
SCUBE2-202ENST00000450649 EHMT2Q96KQ7 1210 aa26.49■■□□□ 1.83
SCUBE2-202ENST00000450649 GTF3C3Q9Y5Q9 886 aa26.45■■□□□ 1.83
SCUBE2-202ENST00000450649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
SCUBE2-202ENST00000450649 CENPBP07199 599 aaPredicted RBP26.38■■□□□ 1.81
SCUBE2-202ENST00000450649 CCER1Q8TC90 406 aaPredicted RBP26.35■■□□□ 1.81
SCUBE2-202ENST00000450649 WIZO95785 1651 aa26.34■■□□□ 1.81
SCUBE2-202ENST00000450649 DIEXFQ68CQ4 756 aaKnown RBP26.32■■□□□ 1.8
SCUBE2-202ENST00000450649 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
SCUBE2-202ENST00000450649 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
SCUBE2-202ENST00000450649 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
SCUBE2-202ENST00000450649 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
SCUBE2-202ENST00000450649 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
SCUBE2-202ENST00000450649 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
SCUBE2-202ENST00000450649 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
SCUBE2-202ENST00000450649 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
SCUBE2-202ENST00000450649 ABCC8Q09428 1581 aa25.84■■□□□ 1.73
SCUBE2-202ENST00000450649 YTHDC1Q96MU7 727 aaKnown RBP25.83■■□□□ 1.73
SCUBE2-202ENST00000450649 TTBK1Q5TCY1 1321 aaPredicted RBP25.8■■□□□ 1.72
SCUBE2-202ENST00000450649 CEP162Q5TB80 1403 aa25.73■■□□□ 1.71
SCUBE2-202ENST00000450649 TNIKQ9UKE5 1360 aa25.72■■□□□ 1.71
SCUBE2-202ENST00000450649 EEA1Q15075 1411 aa25.71■■□□□ 1.71
SCUBE2-202ENST00000450649 SOGA1O94964 1423 aa25.68■■□□□ 1.7
SCUBE2-202ENST00000450649 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
SCUBE2-202ENST00000450649 MIER1Q8N108 512 aa25.66■■□□□ 1.7
SCUBE2-202ENST00000450649 CSRNP3Q8WYN3 585 aa25.61■■□□□ 1.69
SCUBE2-202ENST00000450649 RUSC2Q8N2Y8 1516 aa25.52■■□□□ 1.68
SCUBE2-202ENST00000450649 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
SCUBE2-202ENST00000450649 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
SCUBE2-202ENST00000450649 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SCUBE2-202ENST00000450649 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
SCUBE2-202ENST00000450649 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
SCUBE2-202ENST00000450649 KIF21BO75037 1637 aa25.31■■□□□ 1.64
SCUBE2-202ENST00000450649 HNRNPUL2Q1KMD3 747 aaKnown RBP25.3■■□□□ 1.64
SCUBE2-202ENST00000450649 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
SCUBE2-202ENST00000450649 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
SCUBE2-202ENST00000450649 CLSPNQ9HAW4 1339 aa25.23■■□□□ 1.63
SCUBE2-202ENST00000450649 SUPT16HQ9Y5B9 1047 aaKnown RBP25.23■■□□□ 1.63
SCUBE2-202ENST00000450649 CLIP1P30622 1438 aa25.2■■□□□ 1.62
SCUBE2-202ENST00000450649 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
SCUBE2-202ENST00000450649 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
SCUBE2-202ENST00000450649 VPS8Q8N3P4 1428 aa25.15■■□□□ 1.62
SCUBE2-202ENST00000450649 TSHZ2Q9NRE2 1034 aa25.09■■□□□ 1.61
SCUBE2-202ENST00000450649 ANP32EQ9BTT0 268 aa25.07■■□□□ 1.6
SCUBE2-202ENST00000450649 RAPGEF2Q9Y4G8 1499 aa25.06■■□□□ 1.6
SCUBE2-202ENST00000450649 APLP2Q06481 763 aa25.01■■□□□ 1.59
SCUBE2-202ENST00000450649 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
SCUBE2-202ENST00000450649 BCL11AQ9H165 835 aa24.89■■□□□ 1.58
SCUBE2-202ENST00000450649 BIVM-ERCC5R4GMW8 1640 aa24.88■■□□□ 1.57
SCUBE2-202ENST00000450649 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
SCUBE2-202ENST00000450649 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
SCUBE2-202ENST00000450649 PRXQ9BXM0 1461 aa24.83■■□□□ 1.57
SCUBE2-202ENST00000450649 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
SCUBE2-202ENST00000450649 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
SCUBE2-202ENST00000450649 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
SCUBE2-202ENST00000450649 BCANQ96GW7 911 aa24.68■■□□□ 1.54
SCUBE2-202ENST00000450649 KCNH8Q96L42 1107 aa24.66■■□□□ 1.54
SCUBE2-202ENST00000450649 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
SCUBE2-202ENST00000450649 CUX1P39880 1505 aa24.65■■□□□ 1.54
SCUBE2-202ENST00000450649 KIF27Q86VH2 1401 aa24.64■■□□□ 1.53
SCUBE2-202ENST00000450649 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
SCUBE2-202ENST00000450649 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
SCUBE2-202ENST00000450649 FKBP8Q14318 412 aa24.59■■□□□ 1.53
SCUBE2-202ENST00000450649 CUX2O14529 1486 aa24.56■■□□□ 1.52
SCUBE2-202ENST00000450649 CFTRP13569 1480 aa24.54■■□□□ 1.52
SCUBE2-202ENST00000450649 RBM19Q9Y4C8 960 aaKnown RBP24.51■■□□□ 1.51
SCUBE2-202ENST00000450649 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
SCUBE2-202ENST00000450649 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
SCUBE2-202ENST00000450649 NEFLP07196 543 aa24.4■■□□□ 1.5
SCUBE2-202ENST00000450649 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
SCUBE2-202ENST00000450649 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
SCUBE2-202ENST00000450649 IGF1RP08069 1367 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms