RNA–Protein interactions for RNA: ENST00000377307.6

ARHGAP39-202, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGAP39, Length 4,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-202ENST00000377307 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
ARHGAP39-202ENST00000377307 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
ARHGAP39-202ENST00000377307 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
ARHGAP39-202ENST00000377307 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
ARHGAP39-202ENST00000377307 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
ARHGAP39-202ENST00000377307 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
ARHGAP39-202ENST00000377307 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
ARHGAP39-202ENST00000377307 HRCP23327 699 aa25.54■■□□□ 1.68
ARHGAP39-202ENST00000377307 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
ARHGAP39-202ENST00000377307 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
ARHGAP39-202ENST00000377307 CENPBP07199 599 aaPredicted RBP25.23■■□□□ 1.63
ARHGAP39-202ENST00000377307 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
ARHGAP39-202ENST00000377307 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
ARHGAP39-202ENST00000377307 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
ARHGAP39-202ENST00000377307 MYT1Q01538 1121 aa25.02■■□□□ 1.6
ARHGAP39-202ENST00000377307 CCER1Q8TC90 406 aaPredicted RBP25.01■■□□□ 1.59
ARHGAP39-202ENST00000377307 APLP2Q06481 763 aa24.96■■□□□ 1.59
ARHGAP39-202ENST00000377307 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.57
ARHGAP39-202ENST00000377307 TTBK1Q5TCY1 1321 aaPredicted RBP24.83■■□□□ 1.56
ARHGAP39-202ENST00000377307 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
ARHGAP39-202ENST00000377307 YTHDC1Q96MU7 727 aaKnown RBP24.46■■□□□ 1.51
ARHGAP39-202ENST00000377307 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
ARHGAP39-202ENST00000377307 ERICH6Q7L0X2 663 aa24.19■■□□□ 1.46
ARHGAP39-202ENST00000377307 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
ARHGAP39-202ENST00000377307 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
ARHGAP39-202ENST00000377307 NEFLP07196 543 aa24.13■■□□□ 1.45
ARHGAP39-202ENST00000377307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.11■■□□□ 1.45
ARHGAP39-202ENST00000377307 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
ARHGAP39-202ENST00000377307 GTF3C3Q9Y5Q9 886 aa23.94■■□□□ 1.42
ARHGAP39-202ENST00000377307 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
ARHGAP39-202ENST00000377307 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
ARHGAP39-202ENST00000377307 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
ARHGAP39-202ENST00000377307 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
ARHGAP39-202ENST00000377307 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
ARHGAP39-202ENST00000377307 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
ARHGAP39-202ENST00000377307 ITGAEP38570 1179 aa23.54■■□□□ 1.36
ARHGAP39-202ENST00000377307 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
ARHGAP39-202ENST00000377307 NEUROD1Q13562 356 aa23.41■■□□□ 1.34
ARHGAP39-202ENST00000377307 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
ARHGAP39-202ENST00000377307 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
ARHGAP39-202ENST00000377307 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
ARHGAP39-202ENST00000377307 BCANQ96GW7 911 aa23.18■■□□□ 1.3
ARHGAP39-202ENST00000377307 ANP32CO43423 234 aa23.06■■□□□ 1.28
ARHGAP39-202ENST00000377307 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.28
ARHGAP39-202ENST00000377307 RTL5Q5HYW3 569 aaPredicted RBP23.01■■□□□ 1.27
ARHGAP39-202ENST00000377307 DAXXQ9UER7 740 aaPredicted RBP22.99■■□□□ 1.27
ARHGAP39-202ENST00000377307 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
ARHGAP39-202ENST00000377307 ABCC9O60706 1549 aa22.98■■□□□ 1.27
ARHGAP39-202ENST00000377307 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
ARHGAP39-202ENST00000377307 MIER1Q8N108 512 aa22.93■■□□□ 1.26
ARHGAP39-202ENST00000377307 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
ARHGAP39-202ENST00000377307 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
ARHGAP39-202ENST00000377307 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
ARHGAP39-202ENST00000377307 FKBP8Q14318 412 aa22.82■■□□□ 1.24
ARHGAP39-202ENST00000377307 PABPN1Q86U42 306 aaKnown RBP eCLIP22.75■■□□□ 1.23
ARHGAP39-202ENST00000377307 TRIM52Q96A61 297 aa22.7■■□□□ 1.23
ARHGAP39-202ENST00000377307 CEP162Q5TB80 1403 aa22.69■■□□□ 1.22
ARHGAP39-202ENST00000377307 EEA1Q15075 1411 aa22.65■■□□□ 1.22
ARHGAP39-202ENST00000377307 DDX10Q13206 875 aaKnown RBP22.64■■□□□ 1.21
ARHGAP39-202ENST00000377307 CLIP1P30622 1438 aa22.59■■□□□ 1.21
ARHGAP39-202ENST00000377307 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
ARHGAP39-202ENST00000377307 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
ARHGAP39-202ENST00000377307 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
ARHGAP39-202ENST00000377307 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
ARHGAP39-202ENST00000377307 ANP32AP39687 249 aaKnown RBP22.53■■□□□ 1.2
ARHGAP39-202ENST00000377307 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
ARHGAP39-202ENST00000377307 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
ARHGAP39-202ENST00000377307 TONSLQ96HA7 1378 aa22.51■■□□□ 1.19
ARHGAP39-202ENST00000377307 P3H3Q8IVL6 736 aa22.42■■□□□ 1.18
ARHGAP39-202ENST00000377307 SUPT16HQ9Y5B9 1047 aaKnown RBP22.39■■□□□ 1.17
ARHGAP39-202ENST00000377307 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
ARHGAP39-202ENST00000377307 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
ARHGAP39-202ENST00000377307 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.15
ARHGAP39-202ENST00000377307 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.159e-6■■■■■ 50.1
ARHGAP39-202ENST00000377307 NPM2Q86SE8 214 aaKnown RBP22.22■■□□□ 1.15
ARHGAP39-202ENST00000377307 CCDC136Q96JN2 1154 aa22.19■■□□□ 1.14
ARHGAP39-202ENST00000377307 HIRIP3Q9BW71 556 aaPredicted RBP22.18■■□□□ 1.14
ARHGAP39-202ENST00000377307 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
ARHGAP39-202ENST00000377307 IRX6P78412 446 aaPredicted RBP22.17■■□□□ 1.14
ARHGAP39-202ENST00000377307 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
ARHGAP39-202ENST00000377307 MRS2Q9HD23 443 aa22.16■■□□□ 1.14
ARHGAP39-202ENST00000377307 NBR1Q14596 966 aa22.14■■□□□ 1.14
ARHGAP39-202ENST00000377307 NACADO15069 1562 aa22.13■■□□□ 1.13
ARHGAP39-202ENST00000377307 SOGA1O94964 1423 aa22.12■■□□□ 1.13
ARHGAP39-202ENST00000377307 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
ARHGAP39-202ENST00000377307 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
ARHGAP39-202ENST00000377307 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
ARHGAP39-202ENST00000377307 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
ARHGAP39-202ENST00000377307 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
ARHGAP39-202ENST00000377307 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
ARHGAP39-202ENST00000377307 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
ARHGAP39-202ENST00000377307 TSHZ2Q9NRE2 1034 aa21.99■■□□□ 1.11
ARHGAP39-202ENST00000377307 BCL11AQ9H165 835 aa21.98■■□□□ 1.11
ARHGAP39-202ENST00000377307 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
ARHGAP39-202ENST00000377307 TIMELESSQ9UNS1 1208 aa21.98■■□□□ 1.11
ARHGAP39-202ENST00000377307 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
ARHGAP39-202ENST00000377307 CHIC2Q9UKJ5 165 aa21.97■■□□□ 1.11
ARHGAP39-202ENST00000377307 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
ARHGAP39-202ENST00000377307 CANXP27824 592 aaKnown RBP21.97■■□□□ 1.11
ARHGAP39-202ENST00000377307 PPP4R2Q9NY27 417 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms