Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AC011270.2-201ENST00000624293 2550 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 TSPY7P-201ENST00000431358 1114 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 GCSHP5-201ENST00000443090 522 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 C2orf69P3-201ENST00000565542 1120 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AC010653.2-201ENST00000623505 997 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AL157888.1-201ENST00000631930 593 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 AC005915.1-201ENST00000624912 2018 ntBASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV5A0A0B4J249 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 PVRIG2P-201ENST00000435460 978 ntBASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 AC092865.7-201ENST00000641832 219 ntBASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV5A0A0B4J249 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms