RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
PRKCSH-205ENST00000587327 CCDC180Q9P1Z9 1646 aa30.6■■■□□ 2.49
PRKCSH-205ENST00000587327 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
PRKCSH-205ENST00000587327 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
PRKCSH-205ENST00000587327 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
PRKCSH-205ENST00000587327 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
PRKCSH-205ENST00000587327 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
PRKCSH-205ENST00000587327 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
PRKCSH-205ENST00000587327 ABCC9O60706 1549 aa28.47■■■□□ 2.15
PRKCSH-205ENST00000587327 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
PRKCSH-205ENST00000587327 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
PRKCSH-205ENST00000587327 NACADO15069 1562 aa28.32■■■□□ 2.12
PRKCSH-205ENST00000587327 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
PRKCSH-205ENST00000587327 RSF1Q96T23 1441 aaPredicted RBP27.86■■■□□ 2.05
PRKCSH-205ENST00000587327 HRCP23327 699 aa27.77■■■□□ 2.04
PRKCSH-205ENST00000587327 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
PRKCSH-205ENST00000587327 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
PRKCSH-205ENST00000587327 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
PRKCSH-205ENST00000587327 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
PRKCSH-205ENST00000587327 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
PRKCSH-205ENST00000587327 WIZO95785 1651 aa27.37■■□□□ 1.97
PRKCSH-205ENST00000587327 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
PRKCSH-205ENST00000587327 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
PRKCSH-205ENST00000587327 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
PRKCSH-205ENST00000587327 TRIM26Q12899 539 aaPredicted RBP27.12■■□□□ 1.93
PRKCSH-205ENST00000587327 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
PRKCSH-205ENST00000587327 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
PRKCSH-205ENST00000587327 TOP2AP11388 1531 aaKnown RBP27.02■■□□□ 1.92
PRKCSH-205ENST00000587327 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
PRKCSH-205ENST00000587327 EIF4G1Q04637 1599 aaKnown RBP26.94■■□□□ 1.9
PRKCSH-205ENST00000587327 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PRKCSH-205ENST00000587327 FAM9AQ8IZU1 332 aaPredicted RBP26.8■■□□□ 1.88
PRKCSH-205ENST00000587327 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
PRKCSH-205ENST00000587327 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
PRKCSH-205ENST00000587327 ZEB1P37275 1124 aaPredicted RBP26.62■■□□□ 1.85
PRKCSH-205ENST00000587327 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
PRKCSH-205ENST00000587327 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
PRKCSH-205ENST00000587327 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
PRKCSH-205ENST00000587327 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
PRKCSH-205ENST00000587327 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
PRKCSH-205ENST00000587327 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
PRKCSH-205ENST00000587327 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
PRKCSH-205ENST00000587327 SOGA1O94964 1423 aa26.15■■□□□ 1.78
PRKCSH-205ENST00000587327 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
PRKCSH-205ENST00000587327 EEA1Q15075 1411 aa26.06■■□□□ 1.76
PRKCSH-205ENST00000587327 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
PRKCSH-205ENST00000587327 CEP162Q5TB80 1403 aa25.96■■□□□ 1.75
PRKCSH-205ENST00000587327 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
PRKCSH-205ENST00000587327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.93■■□□□ 1.74
PRKCSH-205ENST00000587327 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
PRKCSH-205ENST00000587327 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
PRKCSH-205ENST00000587327 TOP2BQ02880 1626 aa25.88■■□□□ 1.73
PRKCSH-205ENST00000587327 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
PRKCSH-205ENST00000587327 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
PRKCSH-205ENST00000587327 CFTRP13569 1480 aa25.8■■□□□ 1.72
PRKCSH-205ENST00000587327 KIF21BO75037 1637 aa25.78■■□□□ 1.72
PRKCSH-205ENST00000587327 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
PRKCSH-205ENST00000587327 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
PRKCSH-205ENST00000587327 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
PRKCSH-205ENST00000587327 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
PRKCSH-205ENST00000587327 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
PRKCSH-205ENST00000587327 CUX1P39880 1505 aa25.7■■□□□ 1.7
PRKCSH-205ENST00000587327 SCAF1Q9H7N4 1312 aaKnown RBP25.64■■□□□ 1.7
PRKCSH-205ENST00000587327 RAPGEF2Q9Y4G8 1499 aa25.57■■□□□ 1.68
PRKCSH-205ENST00000587327 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
PRKCSH-205ENST00000587327 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
PRKCSH-205ENST00000587327 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
PRKCSH-205ENST00000587327 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
PRKCSH-205ENST00000587327 CLIP1P30622 1438 aa25.45■■□□□ 1.66
PRKCSH-205ENST00000587327 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
PRKCSH-205ENST00000587327 ACIN1Q9UKV3 1341 aaKnown RBP25.39■■□□□ 1.65
PRKCSH-205ENST00000587327 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
PRKCSH-205ENST00000587327 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
PRKCSH-205ENST00000587327 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
PRKCSH-205ENST00000587327 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
PRKCSH-205ENST00000587327 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
PRKCSH-205ENST00000587327 ZNF316A6NFI3 1004 aaPredicted RBP25.28■■□□□ 1.64
PRKCSH-205ENST00000587327 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
PRKCSH-205ENST00000587327 CUX2O14529 1486 aa25.26■■□□□ 1.63
PRKCSH-205ENST00000587327 APLP2Q06481 763 aa25.24■■□□□ 1.63
PRKCSH-205ENST00000587327 NESP48681 1621 aa25.24■■□□□ 1.63
PRKCSH-205ENST00000587327 CENPBP07199 599 aaPredicted RBP25.23■■□□□ 1.63
PRKCSH-205ENST00000587327 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
PRKCSH-205ENST00000587327 RANGAP1P46060 587 aaPredicted RBP25.17■■□□□ 1.62
PRKCSH-205ENST00000587327 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
PRKCSH-205ENST00000587327 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
PRKCSH-205ENST00000587327 IGF1RP08069 1367 aa25.15■■□□□ 1.62
PRKCSH-205ENST00000587327 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
PRKCSH-205ENST00000587327 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
PRKCSH-205ENST00000587327 GTF3C3Q9Y5Q9 886 aa25.07■■□□□ 1.6
PRKCSH-205ENST00000587327 ABCA10Q8WWZ4 1543 aa25.04■■□□□ 1.6
PRKCSH-205ENST00000587327 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
PRKCSH-205ENST00000587327 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
PRKCSH-205ENST00000587327 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
PRKCSH-205ENST00000587327 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
PRKCSH-205ENST00000587327 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
PRKCSH-205ENST00000587327 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
PRKCSH-205ENST00000587327 CLSPNQ9HAW4 1339 aa24.92■■□□□ 1.58
PRKCSH-205ENST00000587327 PDS5BQ9NTI5 1447 aa24.92■■□□□ 1.58
PRKCSH-205ENST00000587327 MIER1Q8N108 512 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms