RNA–Protein interactions for RNA: ENST00000398841.5

YPEL3-202, Transcript of yippee like 3, humanhuman

TSL 1 (best) BASIC

Gene YPEL3, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-202ENST00000398841 NISCHQ9Y2I1 1504 aa44.85■■■■■ 4.77
YPEL3-202ENST00000398841 CCDC180Q9P1Z9 1646 aa39.79■■■■□ 3.96
YPEL3-202ENST00000398841 ABCC9O60706 1549 aa38.87■■■■□ 3.81
YPEL3-202ENST00000398841 DCAF8L2P0C7V8 631 aa37.49■■■■□ 3.59
YPEL3-202ENST00000398841 RB1CC1Q8TDY2 1594 aa37.42■■■■□ 3.58
YPEL3-202ENST00000398841 NACADO15069 1562 aa37.4■■■■□ 3.58
YPEL3-202ENST00000398841 ZCCHC6Q5VYS8 1495 aaKnown RBP37.4■■■■□ 3.58
YPEL3-202ENST00000398841 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
YPEL3-202ENST00000398841 DCAF1Q9Y4B6 1507 aa37.1■■■■□ 3.53
YPEL3-202ENST00000398841 UNC13AQ9UPW8 1703 aa36.52■■■■□ 3.44
YPEL3-202ENST00000398841 SCRIBQ14160 1630 aa36.37■■■■□ 3.41
YPEL3-202ENST00000398841 PABPN1Q86U42 306 aaKnown RBP eCLIP36.36■■■■□ 3.41
YPEL3-202ENST00000398841 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
YPEL3-202ENST00000398841 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
YPEL3-202ENST00000398841 DNAJC5BQ9UF47 199 aa35.54■■■■□ 3.28
YPEL3-202ENST00000398841 EIF4G1Q04637 1599 aaKnown RBP35.32■■■■□ 3.24
YPEL3-202ENST00000398841 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
YPEL3-202ENST00000398841 CECR2Q9BXF3 1484 aa34.95■■■■□ 3.18
YPEL3-202ENST00000398841 SMARCA4P51532 1647 aa34.78■■■■□ 3.16
YPEL3-202ENST00000398841 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.15
YPEL3-202ENST00000398841 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
YPEL3-202ENST00000398841 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
YPEL3-202ENST00000398841 SMARCA2P51531 1590 aa34.52■■■■□ 3.12
YPEL3-202ENST00000398841 NCAPD3P42695 1498 aa34.51■■■■□ 3.12
YPEL3-202ENST00000398841 PEG3Q9GZU2 1588 aa34.41■■■■□ 3.1
YPEL3-202ENST00000398841 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
YPEL3-202ENST00000398841 BAZ1BQ9UIG0 1483 aaKnown RBP34.3■■■■□ 3.08
YPEL3-202ENST00000398841 RSF1Q96T23 1441 aaPredicted RBP34.24■■■■□ 3.07
YPEL3-202ENST00000398841 WIZO95785 1651 aa34.21■■■■□ 3.07
YPEL3-202ENST00000398841 TOP2AP11388 1531 aaKnown RBP33.85■■■■□ 3.01
YPEL3-202ENST00000398841 NESP48681 1621 aa33.67■■■□□ 2.98
YPEL3-202ENST00000398841 LAMC3Q9Y6N6 1575 aa33.58■■■□□ 2.97
YPEL3-202ENST00000398841 CADPSQ9ULU8 1353 aa33.53■■■□□ 2.96
YPEL3-202ENST00000398841 SUPT5HO00267 1087 aaKnown RBP33.51■■■□□ 2.96
YPEL3-202ENST00000398841 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
YPEL3-202ENST00000398841 CCDC88BA6NC98 1476 aa33.46■■■□□ 2.95
YPEL3-202ENST00000398841 PDS5BQ9NTI5 1447 aa33.37■■■□□ 2.93
YPEL3-202ENST00000398841 CFTRP13569 1480 aa33.35■■■□□ 2.93
YPEL3-202ENST00000398841 KIF21AQ7Z4S6 1674 aa33.24■■■□□ 2.91
YPEL3-202ENST00000398841 FANCD2Q9BXW9 1451 aa33.15■■■□□ 2.9
YPEL3-202ENST00000398841 THOC2Q8NI27 1593 aaKnown RBP33.11■■■□□ 2.89
YPEL3-202ENST00000398841 CEP164Q9UPV0 1460 aa33.11■■■□□ 2.89
YPEL3-202ENST00000398841 CUX2O14529 1486 aa33.07■■■□□ 2.88
YPEL3-202ENST00000398841 PRDM2Q13029 1718 aa33.06■■■□□ 2.88
YPEL3-202ENST00000398841 MRC2Q9UBG0 1479 aa33.02■■■□□ 2.88
YPEL3-202ENST00000398841 WDR62O43379 1518 aa32.89■■■□□ 2.86
YPEL3-202ENST00000398841 URB2Q14146 1524 aaKnown RBP32.81■■■□□ 2.84
YPEL3-202ENST00000398841 TOPBP1Q92547 1522 aa32.63■■■□□ 2.81
YPEL3-202ENST00000398841 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
YPEL3-202ENST00000398841 DNMBPQ6XZF7 1577 aa32.6■■■□□ 2.81
YPEL3-202ENST00000398841 CUX1P39880 1505 aa32.43■■■□□ 2.78
YPEL3-202ENST00000398841 IFT140Q96RY7 1462 aa32.39■■■□□ 2.78
YPEL3-202ENST00000398841 POLA1P09884 1462 aaPredicted RBP32.36■■■□□ 2.77
YPEL3-202ENST00000398841 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
YPEL3-202ENST00000398841 WRNQ14191 1432 aaPredicted RBP eCLIP32.28■■■□□ 2.76
YPEL3-202ENST00000398841 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
YPEL3-202ENST00000398841 SOGA1O94964 1423 aa32.25■■■□□ 2.75
YPEL3-202ENST00000398841 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
YPEL3-202ENST00000398841 RAD54L2Q9Y4B4 1467 aa32.23■■■□□ 2.75
YPEL3-202ENST00000398841 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
YPEL3-202ENST00000398841 TOP2BQ02880 1626 aa32.18■■■□□ 2.74
YPEL3-202ENST00000398841 BIVM-ERCC5R4GMW8 1640 aa32.16■■■□□ 2.74
YPEL3-202ENST00000398841 EIF4G3O43432 1585 aaKnown RBP32.12■■■□□ 2.73
YPEL3-202ENST00000398841 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.736e-9■■■■□ 26.1
YPEL3-202ENST00000398841 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
YPEL3-202ENST00000398841 WDR97A6NE52 1622 aa32■■■□□ 2.71
YPEL3-202ENST00000398841 ABCA10Q8WWZ4 1543 aa31.99■■■□□ 2.71
YPEL3-202ENST00000398841 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
YPEL3-202ENST00000398841 GAPVD1Q14C86 1478 aa31.87■■■□□ 2.69
YPEL3-202ENST00000398841 ABCA5Q8WWZ7 1642 aa31.85■■■□□ 2.69
YPEL3-202ENST00000398841 GRIN2BQ13224 1484 aa31.85■■■□□ 2.69
YPEL3-202ENST00000398841 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
YPEL3-202ENST00000398841 PBRM1Q86U86 1689 aa31.77■■■□□ 2.68
YPEL3-202ENST00000398841 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
YPEL3-202ENST00000398841 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
YPEL3-202ENST00000398841 FBLN2P98095 1184 aa31.71■■■□□ 2.67
YPEL3-202ENST00000398841 CHD1O14646 1710 aa31.66■■■□□ 2.66
YPEL3-202ENST00000398841 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
YPEL3-202ENST00000398841 SYNJ2O15056 1496 aa31.62■■■□□ 2.65
YPEL3-202ENST00000398841 CHMP7Q8WUX9 453 aaPredicted RBP31.62■■■□□ 2.65
YPEL3-202ENST00000398841 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
YPEL3-202ENST00000398841 KIF27Q86VH2 1401 aa31.6■■■□□ 2.65
YPEL3-202ENST00000398841 ADAMTS12P58397 1594 aa31.54■■■□□ 2.64
YPEL3-202ENST00000398841 FHAD1B1AJZ9 1412 aa31.51■■■□□ 2.63
YPEL3-202ENST00000398841 IGF1RP08069 1367 aa31.44■■■□□ 2.62
YPEL3-202ENST00000398841 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
YPEL3-202ENST00000398841 RUSC2Q8N2Y8 1516 aa31.35■■■□□ 2.61
YPEL3-202ENST00000398841 CUL7Q14999 1698 aa31.35■■■□□ 2.61
YPEL3-202ENST00000398841 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
YPEL3-202ENST00000398841 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
YPEL3-202ENST00000398841 NUP160Q12769 1436 aa31.28■■■□□ 2.6
YPEL3-202ENST00000398841 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
YPEL3-202ENST00000398841 CARMIL1Q5VZK9 1371 aa31.27■■■□□ 2.6
YPEL3-202ENST00000398841 ARHGEF11O15085 1522 aa31.22■■■□□ 2.59
YPEL3-202ENST00000398841 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.59
YPEL3-202ENST00000398841 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.59
YPEL3-202ENST00000398841 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.59
YPEL3-202ENST00000398841 RAPGEF2Q9Y4G8 1499 aa31.1■■■□□ 2.57
YPEL3-202ENST00000398841 EEA1Q15075 1411 aa31.07■■■□□ 2.56
YPEL3-202ENST00000398841 CSRNP3Q8WYN3 585 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms