RNA–Protein interactions for RNA: ENST00000428230.6

ARHGEF4-206, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene ARHGEF4, Length 2,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-206ENST00000428230 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
ARHGEF4-206ENST00000428230 CCDC180Q9P1Z9 1646 aa32.6■■■□□ 2.81
ARHGEF4-206ENST00000428230 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
ARHGEF4-206ENST00000428230 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
ARHGEF4-206ENST00000428230 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.61
ARHGEF4-206ENST00000428230 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
ARHGEF4-206ENST00000428230 ABCC9O60706 1549 aa30.73■■■□□ 2.51
ARHGEF4-206ENST00000428230 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
ARHGEF4-206ENST00000428230 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
ARHGEF4-206ENST00000428230 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
ARHGEF4-206ENST00000428230 NACADO15069 1562 aa30.27■■■□□ 2.44
ARHGEF4-206ENST00000428230 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.38
ARHGEF4-206ENST00000428230 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
ARHGEF4-206ENST00000428230 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
ARHGEF4-206ENST00000428230 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
ARHGEF4-206ENST00000428230 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
ARHGEF4-206ENST00000428230 CHIC1Q5VXU3 224 aa29.29■■■□□ 2.28
ARHGEF4-206ENST00000428230 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
ARHGEF4-206ENST00000428230 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
ARHGEF4-206ENST00000428230 WIZO95785 1651 aa29.14■■■□□ 2.26
ARHGEF4-206ENST00000428230 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
ARHGEF4-206ENST00000428230 SMARCA4P51532 1647 aa28.96■■■□□ 2.23
ARHGEF4-206ENST00000428230 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
ARHGEF4-206ENST00000428230 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
ARHGEF4-206ENST00000428230 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
ARHGEF4-206ENST00000428230 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
ARHGEF4-206ENST00000428230 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
ARHGEF4-206ENST00000428230 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
ARHGEF4-206ENST00000428230 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
ARHGEF4-206ENST00000428230 LOC105371045A0A1W2PR82 267 aa28.35■■■□□ 2.13
ARHGEF4-206ENST00000428230 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
ARHGEF4-206ENST00000428230 FAM9AQ8IZU1 332 aaPredicted RBP28.18■■■□□ 2.1
ARHGEF4-206ENST00000428230 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
ARHGEF4-206ENST00000428230 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
ARHGEF4-206ENST00000428230 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
ARHGEF4-206ENST00000428230 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
ARHGEF4-206ENST00000428230 WRNQ14191 1432 aaPredicted RBP eCLIP27.78■■■□□ 2.04
ARHGEF4-206ENST00000428230 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
ARHGEF4-206ENST00000428230 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
ARHGEF4-206ENST00000428230 SOGA1O94964 1423 aa27.71■■■□□ 2.03
ARHGEF4-206ENST00000428230 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
ARHGEF4-206ENST00000428230 CFTRP13569 1480 aa27.53■■■□□ 2
ARHGEF4-206ENST00000428230 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
ARHGEF4-206ENST00000428230 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
ARHGEF4-206ENST00000428230 EEA1Q15075 1411 aa27.46■■□□□ 1.99
ARHGEF4-206ENST00000428230 CSRNP3Q8WYN3 585 aa27.45■■□□□ 1.99
ARHGEF4-206ENST00000428230 BIVM-ERCC5R4GMW8 1640 aa27.4■■□□□ 1.98
ARHGEF4-206ENST00000428230 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
ARHGEF4-206ENST00000428230 CUX1P39880 1505 aa27.35■■□□□ 1.97
ARHGEF4-206ENST00000428230 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
ARHGEF4-206ENST00000428230 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
ARHGEF4-206ENST00000428230 GOLGA3Q08378 1498 aa27.23■■□□□ 1.95
ARHGEF4-206ENST00000428230 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
ARHGEF4-206ENST00000428230 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
ARHGEF4-206ENST00000428230 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
ARHGEF4-206ENST00000428230 KIF21BO75037 1637 aa27.17■■□□□ 1.94
ARHGEF4-206ENST00000428230 CEP164Q9UPV0 1460 aa27.16■■□□□ 1.94
ARHGEF4-206ENST00000428230 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
ARHGEF4-206ENST00000428230 NESP48681 1621 aa27.15■■□□□ 1.94
ARHGEF4-206ENST00000428230 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
ARHGEF4-206ENST00000428230 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
ARHGEF4-206ENST00000428230 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.93
ARHGEF4-206ENST00000428230 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
ARHGEF4-206ENST00000428230 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
ARHGEF4-206ENST00000428230 HRCP23327 699 aa26.96■■□□□ 1.91
ARHGEF4-206ENST00000428230 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
ARHGEF4-206ENST00000428230 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
ARHGEF4-206ENST00000428230 CUX2O14529 1486 aa26.9■■□□□ 1.9
ARHGEF4-206ENST00000428230 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
ARHGEF4-206ENST00000428230 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
ARHGEF4-206ENST00000428230 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
ARHGEF4-206ENST00000428230 CLIP1P30622 1438 aa26.86■■□□□ 1.89
ARHGEF4-206ENST00000428230 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
ARHGEF4-206ENST00000428230 TTBK1Q5TCY1 1321 aaPredicted RBP26.82■■□□□ 1.88
ARHGEF4-206ENST00000428230 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
ARHGEF4-206ENST00000428230 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
ARHGEF4-206ENST00000428230 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.88
ARHGEF4-206ENST00000428230 IGF1RP08069 1367 aa26.76■■□□□ 1.87
ARHGEF4-206ENST00000428230 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
ARHGEF4-206ENST00000428230 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
ARHGEF4-206ENST00000428230 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
ARHGEF4-206ENST00000428230 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
ARHGEF4-206ENST00000428230 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
ARHGEF4-206ENST00000428230 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
ARHGEF4-206ENST00000428230 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
ARHGEF4-206ENST00000428230 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
ARHGEF4-206ENST00000428230 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
ARHGEF4-206ENST00000428230 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
ARHGEF4-206ENST00000428230 APLP2Q06481 763 aa26.43■■□□□ 1.82
ARHGEF4-206ENST00000428230 CUL7Q14999 1698 aa26.41■■□□□ 1.82
ARHGEF4-206ENST00000428230 TARBP1Q13395 1621 aaKnown RBP26.4■■□□□ 1.82
ARHGEF4-206ENST00000428230 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
ARHGEF4-206ENST00000428230 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.81
ARHGEF4-206ENST00000428230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.29■■□□□ 1.8
ARHGEF4-206ENST00000428230 CTTNBP2Q8WZ74 1663 aa26.26■■□□□ 1.8
ARHGEF4-206ENST00000428230 KANK4Q5T7N3 995 aaPredicted RBP26.26■■□□□ 1.79
ARHGEF4-206ENST00000428230 P3H3Q8IVL6 736 aa26.25■■□□□ 1.79
ARHGEF4-206ENST00000428230 AQRO60306 1485 aaKnown RBP eCLIP26.24■■□□□ 1.79
ARHGEF4-206ENST00000428230 WDR62O43379 1518 aa26.24■■□□□ 1.79
ARHGEF4-206ENST00000428230 ERCC6Q03468 1493 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms