RNA–Protein interactions for RNA: ENST00000268184.10

CRTC3-201, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC3, Length 2,537 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-201ENST00000268184 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.59
CRTC3-201ENST00000268184 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
CRTC3-201ENST00000268184 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
CRTC3-201ENST00000268184 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
CRTC3-201ENST00000268184 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
CRTC3-201ENST00000268184 ABCC9O60706 1549 aa31.03■■■□□ 2.56
CRTC3-201ENST00000268184 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
CRTC3-201ENST00000268184 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
CRTC3-201ENST00000268184 NACADO15069 1562 aa30.27■■■□□ 2.44
CRTC3-201ENST00000268184 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
CRTC3-201ENST00000268184 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
CRTC3-201ENST00000268184 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
CRTC3-201ENST00000268184 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
CRTC3-201ENST00000268184 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.3
CRTC3-201ENST00000268184 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
CRTC3-201ENST00000268184 RSF1Q96T23 1441 aaPredicted RBP29.24■■■□□ 2.27
CRTC3-201ENST00000268184 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
CRTC3-201ENST00000268184 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
CRTC3-201ENST00000268184 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
CRTC3-201ENST00000268184 BAZ1AQ9NRL2 1556 aaPredicted RBP28.9■■■□□ 2.22
CRTC3-201ENST00000268184 WIZO95785 1651 aa28.85■■■□□ 2.21
CRTC3-201ENST00000268184 SMARCA4P51532 1647 aa28.78■■■□□ 2.2
CRTC3-201ENST00000268184 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
CRTC3-201ENST00000268184 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
CRTC3-201ENST00000268184 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
CRTC3-201ENST00000268184 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
CRTC3-201ENST00000268184 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
CRTC3-201ENST00000268184 SMARCA2P51531 1590 aa28.21■■■□□ 2.11
CRTC3-201ENST00000268184 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
CRTC3-201ENST00000268184 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
CRTC3-201ENST00000268184 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
CRTC3-201ENST00000268184 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
CRTC3-201ENST00000268184 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
CRTC3-201ENST00000268184 HMGXB3Q12766 1538 aa27.9■■■□□ 2.06
CRTC3-201ENST00000268184 ABCC8Q09428 1581 aa27.79■■■□□ 2.04
CRTC3-201ENST00000268184 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
CRTC3-201ENST00000268184 DNAJC5BQ9UF47 199 aa27.6■■■□□ 2.01
CRTC3-201ENST00000268184 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
CRTC3-201ENST00000268184 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
CRTC3-201ENST00000268184 CFTRP13569 1480 aa27.47■■□□□ 1.99
CRTC3-201ENST00000268184 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
CRTC3-201ENST00000268184 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
CRTC3-201ENST00000268184 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
CRTC3-201ENST00000268184 SOGA1O94964 1423 aa27.32■■□□□ 1.96
CRTC3-201ENST00000268184 NESP48681 1621 aa27.29■■□□□ 1.96
CRTC3-201ENST00000268184 HRCP23327 699 aa27.26■■□□□ 1.95
CRTC3-201ENST00000268184 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
CRTC3-201ENST00000268184 TRIM26Q12899 539 aaPredicted RBP27.22■■□□□ 1.95
CRTC3-201ENST00000268184 CUX1P39880 1505 aa27.15■■□□□ 1.94
CRTC3-201ENST00000268184 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
CRTC3-201ENST00000268184 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
CRTC3-201ENST00000268184 EEA1Q15075 1411 aa27.1■■□□□ 1.93
CRTC3-201ENST00000268184 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
CRTC3-201ENST00000268184 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
CRTC3-201ENST00000268184 BIVM-ERCC5R4GMW8 1640 aa27.05■■□□□ 1.92
CRTC3-201ENST00000268184 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
CRTC3-201ENST00000268184 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
CRTC3-201ENST00000268184 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
CRTC3-201ENST00000268184 UBTFP17480 764 aaKnown RBP26.86■■□□□ 1.89
CRTC3-201ENST00000268184 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
CRTC3-201ENST00000268184 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
CRTC3-201ENST00000268184 CEP162Q5TB80 1403 aa26.8■■□□□ 1.88
CRTC3-201ENST00000268184 GOLGA3Q08378 1498 aa26.8■■□□□ 1.88
CRTC3-201ENST00000268184 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
CRTC3-201ENST00000268184 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
CRTC3-201ENST00000268184 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
CRTC3-201ENST00000268184 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
CRTC3-201ENST00000268184 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
CRTC3-201ENST00000268184 CUX2O14529 1486 aa26.74■■□□□ 1.87
CRTC3-201ENST00000268184 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
CRTC3-201ENST00000268184 KIF21BO75037 1637 aa26.72■■□□□ 1.87
CRTC3-201ENST00000268184 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
CRTC3-201ENST00000268184 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
CRTC3-201ENST00000268184 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
CRTC3-201ENST00000268184 IGF1RP08069 1367 aa26.6■■□□□ 1.85
CRTC3-201ENST00000268184 PPARGC1BQ86YN6 1023 aaKnown RBP26.59■■□□□ 1.85
CRTC3-201ENST00000268184 PRXQ9BXM0 1461 aa26.59■■□□□ 1.85
CRTC3-201ENST00000268184 ERCC6Q03468 1493 aa26.53■■□□□ 1.84
CRTC3-201ENST00000268184 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
CRTC3-201ENST00000268184 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
CRTC3-201ENST00000268184 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
CRTC3-201ENST00000268184 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
CRTC3-201ENST00000268184 CARMIL1Q5VZK9 1371 aa26.45■■□□□ 1.83
CRTC3-201ENST00000268184 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
CRTC3-201ENST00000268184 CLIP1P30622 1438 aa26.42■■□□□ 1.82
CRTC3-201ENST00000268184 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
CRTC3-201ENST00000268184 TARBP1Q13395 1621 aaKnown RBP26.33■■□□□ 1.81
CRTC3-201ENST00000268184 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
CRTC3-201ENST00000268184 WDR62O43379 1518 aa26.32■■□□□ 1.8
CRTC3-201ENST00000268184 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.87e-7■■■■□ 24.7
CRTC3-201ENST00000268184 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
CRTC3-201ENST00000268184 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
CRTC3-201ENST00000268184 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
CRTC3-201ENST00000268184 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
CRTC3-201ENST00000268184 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
CRTC3-201ENST00000268184 IFT140Q96RY7 1462 aa26.19■■□□□ 1.78
CRTC3-201ENST00000268184 CUL7Q14999 1698 aa26.13■■□□□ 1.77
CRTC3-201ENST00000268184 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
CRTC3-201ENST00000268184 P3H3Q8IVL6 736 aa26.1■■□□□ 1.77
CRTC3-201ENST00000268184 APLP2Q06481 763 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms