RNA–Protein interactions for RNA: ENST00000344462.8

KCNQ2-202, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNQ2, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-202ENST00000344462 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
KCNQ2-202ENST00000344462 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
KCNQ2-202ENST00000344462 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
KCNQ2-202ENST00000344462 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
KCNQ2-202ENST00000344462 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
KCNQ2-202ENST00000344462 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
KCNQ2-202ENST00000344462 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
KCNQ2-202ENST00000344462 ABCC9O60706 1549 aa29.44■■■□□ 2.3
KCNQ2-202ENST00000344462 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
KCNQ2-202ENST00000344462 CHIC1Q5VXU3 224 aa28.91■■■□□ 2.22
KCNQ2-202ENST00000344462 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
KCNQ2-202ENST00000344462 NACADO15069 1562 aa28.74■■■□□ 2.19
KCNQ2-202ENST00000344462 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
KCNQ2-202ENST00000344462 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
KCNQ2-202ENST00000344462 RB1CC1Q8TDY2 1594 aa28.43■■■□□ 2.14
KCNQ2-202ENST00000344462 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
KCNQ2-202ENST00000344462 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
KCNQ2-202ENST00000344462 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
KCNQ2-202ENST00000344462 WIZO95785 1651 aa28.14■■■□□ 2.09
KCNQ2-202ENST00000344462 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
KCNQ2-202ENST00000344462 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
KCNQ2-202ENST00000344462 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.07
KCNQ2-202ENST00000344462 EHMT2Q96KQ7 1210 aa27.9■■■□□ 2.06
KCNQ2-202ENST00000344462 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
KCNQ2-202ENST00000344462 BICRAQ9NZM4 1560 aa27.75■■■□□ 2.03
KCNQ2-202ENST00000344462 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
KCNQ2-202ENST00000344462 PCGF6Q9BYE7 350 aa27.65■■■□□ 2.02
KCNQ2-202ENST00000344462 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
KCNQ2-202ENST00000344462 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
KCNQ2-202ENST00000344462 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
KCNQ2-202ENST00000344462 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
KCNQ2-202ENST00000344462 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
KCNQ2-202ENST00000344462 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
KCNQ2-202ENST00000344462 PPARGC1BQ86YN6 1023 aaKnown RBP27.12■■□□□ 1.93
KCNQ2-202ENST00000344462 HRCP23327 699 aa27.11■■□□□ 1.93
KCNQ2-202ENST00000344462 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
KCNQ2-202ENST00000344462 PEG3Q9GZU2 1588 aa27.08■■□□□ 1.93
KCNQ2-202ENST00000344462 SOGA1O94964 1423 aa27.05■■□□□ 1.92
KCNQ2-202ENST00000344462 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
KCNQ2-202ENST00000344462 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
KCNQ2-202ENST00000344462 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.89
KCNQ2-202ENST00000344462 TTBK1Q5TCY1 1321 aaPredicted RBP26.82■■□□□ 1.88
KCNQ2-202ENST00000344462 CSRNP3Q8WYN3 585 aa26.8■■□□□ 1.88
KCNQ2-202ENST00000344462 SYNJ1O43426 1573 aa26.79■■□□□ 1.88
KCNQ2-202ENST00000344462 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
KCNQ2-202ENST00000344462 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
KCNQ2-202ENST00000344462 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
KCNQ2-202ENST00000344462 CEP162Q5TB80 1403 aa26.61■■□□□ 1.85
KCNQ2-202ENST00000344462 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
KCNQ2-202ENST00000344462 EEA1Q15075 1411 aa26.52■■□□□ 1.84
KCNQ2-202ENST00000344462 TNIKQ9UKE5 1360 aa26.51■■□□□ 1.83
KCNQ2-202ENST00000344462 GOLGA3Q08378 1498 aa26.45■■□□□ 1.83
KCNQ2-202ENST00000344462 TOP2BQ02880 1626 aa26.39■■□□□ 1.81
KCNQ2-202ENST00000344462 CC2D2AQ9P2K1 1620 aa26.37■■□□□ 1.81
KCNQ2-202ENST00000344462 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
KCNQ2-202ENST00000344462 CFTRP13569 1480 aa26.34■■□□□ 1.81
KCNQ2-202ENST00000344462 CUX1P39880 1505 aa26.34■■□□□ 1.81
KCNQ2-202ENST00000344462 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
KCNQ2-202ENST00000344462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.29■■□□□ 1.8
KCNQ2-202ENST00000344462 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
KCNQ2-202ENST00000344462 KIF21BO75037 1637 aa26.23■■□□□ 1.79
KCNQ2-202ENST00000344462 CLIP1P30622 1438 aa26.22■■□□□ 1.79
KCNQ2-202ENST00000344462 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.79
KCNQ2-202ENST00000344462 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
KCNQ2-202ENST00000344462 NESP48681 1621 aa26.09■■□□□ 1.77
KCNQ2-202ENST00000344462 CCER1Q8TC90 406 aaPredicted RBP26.08■■□□□ 1.77
KCNQ2-202ENST00000344462 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
KCNQ2-202ENST00000344462 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
KCNQ2-202ENST00000344462 PRXQ9BXM0 1461 aa26.03■■□□□ 1.76
KCNQ2-202ENST00000344462 CUX2O14529 1486 aa26.01■■□□□ 1.75
KCNQ2-202ENST00000344462 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
KCNQ2-202ENST00000344462 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
KCNQ2-202ENST00000344462 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
KCNQ2-202ENST00000344462 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
KCNQ2-202ENST00000344462 APLP2Q06481 763 aa25.96■■□□□ 1.75
KCNQ2-202ENST00000344462 HNRNPUL2Q1KMD3 747 aaKnown RBP25.96■■□□□ 1.75
KCNQ2-202ENST00000344462 IGF1RP08069 1367 aa25.89■■□□□ 1.74
KCNQ2-202ENST00000344462 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
KCNQ2-202ENST00000344462 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
KCNQ2-202ENST00000344462 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
KCNQ2-202ENST00000344462 KANK4Q5T7N3 995 aaPredicted RBP25.81■■□□□ 1.72
KCNQ2-202ENST00000344462 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
KCNQ2-202ENST00000344462 P3H3Q8IVL6 736 aa25.76■■□□□ 1.71
KCNQ2-202ENST00000344462 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
KCNQ2-202ENST00000344462 POLA1P09884 1462 aaPredicted RBP25.71■■□□□ 1.71
KCNQ2-202ENST00000344462 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.71
KCNQ2-202ENST00000344462 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
KCNQ2-202ENST00000344462 URB2Q14146 1524 aaKnown RBP25.64■■□□□ 1.69
KCNQ2-202ENST00000344462 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
KCNQ2-202ENST00000344462 ATP1B4Q9UN42 357 aaPredicted RBP25.62■■□□□ 1.69
KCNQ2-202ENST00000344462 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
KCNQ2-202ENST00000344462 ITGAEP38570 1179 aa25.55■■□□□ 1.68
KCNQ2-202ENST00000344462 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
KCNQ2-202ENST00000344462 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
KCNQ2-202ENST00000344462 PDS5BQ9NTI5 1447 aa25.5■■□□□ 1.67
KCNQ2-202ENST00000344462 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
KCNQ2-202ENST00000344462 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
KCNQ2-202ENST00000344462 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
KCNQ2-202ENST00000344462 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.64
KCNQ2-202ENST00000344462 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms