RNA–Protein interactions for RNA: ENST00000273480.3

RNF7-201, Transcript of ring finger protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF7, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-201ENST00000273480 NISCHQ9Y2I1 1504 aa38.62■■■■□ 3.77
RNF7-201ENST00000273480 CCDC180Q9P1Z9 1646 aa33.44■■■□□ 2.94
RNF7-201ENST00000273480 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
RNF7-201ENST00000273480 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
RNF7-201ENST00000273480 SHROOM4Q9ULL8 1493 aa31.93■■■□□ 2.7
RNF7-201ENST00000273480 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
RNF7-201ENST00000273480 ABCC9O60706 1549 aa31.66■■■□□ 2.66
RNF7-201ENST00000273480 MYO15BQ96JP2 1530 aa31.31■■■□□ 2.6
RNF7-201ENST00000273480 NACADO15069 1562 aa31.12■■■□□ 2.57
RNF7-201ENST00000273480 SCRIBQ14160 1630 aa31■■■□□ 2.55
RNF7-201ENST00000273480 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
RNF7-201ENST00000273480 SUPT5HO00267 1087 aaKnown RBP30.81■■■□□ 2.52
RNF7-201ENST00000273480 UNC13AQ9UPW8 1703 aa30.28■■■□□ 2.44
RNF7-201ENST00000273480 CECR2Q9BXF3 1484 aa30.11■■■□□ 2.41
RNF7-201ENST00000273480 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
RNF7-201ENST00000273480 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
RNF7-201ENST00000273480 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
RNF7-201ENST00000273480 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
RNF7-201ENST00000273480 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
RNF7-201ENST00000273480 WIZO95785 1651 aa29.7■■■□□ 2.34
RNF7-201ENST00000273480 SMARCA4P51532 1647 aa29.64■■■□□ 2.33
RNF7-201ENST00000273480 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
RNF7-201ENST00000273480 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
RNF7-201ENST00000273480 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
RNF7-201ENST00000273480 ATAD2BQ9ULI0 1458 aa29.12■■■□□ 2.25
RNF7-201ENST00000273480 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
RNF7-201ENST00000273480 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
RNF7-201ENST00000273480 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
RNF7-201ENST00000273480 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
RNF7-201ENST00000273480 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
RNF7-201ENST00000273480 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
RNF7-201ENST00000273480 HMGXB3Q12766 1538 aa28.71■■■□□ 2.19
RNF7-201ENST00000273480 ABCC8Q09428 1581 aa28.61■■■□□ 2.17
RNF7-201ENST00000273480 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
RNF7-201ENST00000273480 LOC105371045A0A1W2PR82 267 aa28.53■■■□□ 2.16
RNF7-201ENST00000273480 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
RNF7-201ENST00000273480 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
RNF7-201ENST00000273480 CFTRP13569 1480 aa28.23■■■□□ 2.11
RNF7-201ENST00000273480 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
RNF7-201ENST00000273480 EHMT2Q96KQ7 1210 aa28.18■■■□□ 2.1
RNF7-201ENST00000273480 SOGA1O94964 1423 aa28.13■■■□□ 2.09
RNF7-201ENST00000273480 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
RNF7-201ENST00000273480 RUSC2Q8N2Y8 1516 aa28.04■■■□□ 2.08
RNF7-201ENST00000273480 TOP2BQ02880 1626 aa28.01■■■□□ 2.07
RNF7-201ENST00000273480 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.07
RNF7-201ENST00000273480 PRDM2Q13029 1718 aa28■■■□□ 2.07
RNF7-201ENST00000273480 BIVM-ERCC5R4GMW8 1640 aa27.95■■■□□ 2.06
RNF7-201ENST00000273480 CUX1P39880 1505 aa27.95■■■□□ 2.06
RNF7-201ENST00000273480 EEA1Q15075 1411 aa27.93■■■□□ 2.06
RNF7-201ENST00000273480 NESP48681 1621 aa27.89■■■□□ 2.06
RNF7-201ENST00000273480 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.06
RNF7-201ENST00000273480 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
RNF7-201ENST00000273480 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
RNF7-201ENST00000273480 GOLGA3Q08378 1498 aa27.63■■■□□ 2.01
RNF7-201ENST00000273480 UBTFP17480 764 aaKnown RBP27.62■■■□□ 2.01
RNF7-201ENST00000273480 CEP164Q9UPV0 1460 aa27.61■■■□□ 2.01
RNF7-201ENST00000273480 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
RNF7-201ENST00000273480 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
RNF7-201ENST00000273480 KIF21BO75037 1637 aa27.59■■■□□ 2.01
RNF7-201ENST00000273480 KIF27Q86VH2 1401 aa27.55■■■□□ 2
RNF7-201ENST00000273480 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
RNF7-201ENST00000273480 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
RNF7-201ENST00000273480 TOPBP1Q92547 1522 aa27.53■■■□□ 2
RNF7-201ENST00000273480 CEP162Q5TB80 1403 aa27.53■■■□□ 2
RNF7-201ENST00000273480 RAPGEF2Q9Y4G8 1499 aa27.52■■■□□ 2
RNF7-201ENST00000273480 CUX2O14529 1486 aa27.48■■□□□ 1.99
RNF7-201ENST00000273480 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
RNF7-201ENST00000273480 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
RNF7-201ENST00000273480 PCGF6Q9BYE7 350 aa27.44■■□□□ 1.98
RNF7-201ENST00000273480 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
RNF7-201ENST00000273480 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
RNF7-201ENST00000273480 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
RNF7-201ENST00000273480 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
RNF7-201ENST00000273480 IGF1RP08069 1367 aa27.34■■□□□ 1.97
RNF7-201ENST00000273480 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
RNF7-201ENST00000273480 RANGAP1P46060 587 aaPredicted RBP27.26■■□□□ 1.95
RNF7-201ENST00000273480 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.95
RNF7-201ENST00000273480 PPARGC1BQ86YN6 1023 aaKnown RBP27.26■■□□□ 1.95
RNF7-201ENST00000273480 CLIP1P30622 1438 aa27.25■■□□□ 1.95
RNF7-201ENST00000273480 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
RNF7-201ENST00000273480 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
RNF7-201ENST00000273480 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
RNF7-201ENST00000273480 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
RNF7-201ENST00000273480 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
RNF7-201ENST00000273480 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
RNF7-201ENST00000273480 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
RNF7-201ENST00000273480 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
RNF7-201ENST00000273480 WDR62O43379 1518 aa27.02■■□□□ 1.92
RNF7-201ENST00000273480 VPS8Q8N3P4 1428 aa27.01■■□□□ 1.91
RNF7-201ENST00000273480 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
RNF7-201ENST00000273480 CUL7Q14999 1698 aa26.99■■□□□ 1.91
RNF7-201ENST00000273480 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
RNF7-201ENST00000273480 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.92e-6■■■■□ 24.2
RNF7-201ENST00000273480 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
RNF7-201ENST00000273480 ARHGAP35Q9NRY4 1499 aa26.9■■□□□ 1.9
RNF7-201ENST00000273480 IFT140Q96RY7 1462 aa26.88■■□□□ 1.89
RNF7-201ENST00000273480 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
RNF7-201ENST00000273480 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
RNF7-201ENST00000273480 APLP2Q06481 763 aa26.78■■□□□ 1.88
RNF7-201ENST00000273480 HRCP23327 699 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms