RNA–Protein interactions for RNA: ENST00000321265.9

NUDC-201, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDC, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-201ENST00000321265 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
NUDC-201ENST00000321265 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
NUDC-201ENST00000321265 ABCC9O60706 1549 aa35.24■■■■□ 3.23
NUDC-201ENST00000321265 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
NUDC-201ENST00000321265 DCAF8L2P0C7V8 631 aa34.58■■■■□ 3.13
NUDC-201ENST00000321265 DCAF1Q9Y4B6 1507 aa34.36■■■■□ 3.09
NUDC-201ENST00000321265 NACADO15069 1562 aa34.16■■■■□ 3.06
NUDC-201ENST00000321265 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
NUDC-201ENST00000321265 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
NUDC-201ENST00000321265 SHROOM4Q9ULL8 1493 aa33.6■■■□□ 2.97
NUDC-201ENST00000321265 SCRIBQ14160 1630 aa33.6■■■□□ 2.97
NUDC-201ENST00000321265 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
NUDC-201ENST00000321265 PABPN1Q86U42 306 aaKnown RBP eCLIP33.07■■■□□ 2.885e-8■■□□□ 11.9
NUDC-201ENST00000321265 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
NUDC-201ENST00000321265 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
NUDC-201ENST00000321265 BAZ1AQ9NRL2 1556 aaPredicted RBP32.17■■■□□ 2.74
NUDC-201ENST00000321265 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
NUDC-201ENST00000321265 SMARCA4P51532 1647 aa32.14■■■□□ 2.74
NUDC-201ENST00000321265 EIF4G1Q04637 1599 aaKnown RBP32.09■■■□□ 2.73
NUDC-201ENST00000321265 RSF1Q96T23 1441 aaPredicted RBP32.05■■■□□ 2.72
NUDC-201ENST00000321265 SUPT5HO00267 1087 aaKnown RBP32.01■■■□□ 2.72
NUDC-201ENST00000321265 WIZO95785 1651 aa31.91■■■□□ 2.7
NUDC-201ENST00000321265 DNAJC5BQ9UF47 199 aa31.86■■■□□ 2.69
NUDC-201ENST00000321265 CC2D2AQ9P2K1 1620 aa31.84■■■□□ 2.69
NUDC-201ENST00000321265 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
NUDC-201ENST00000321265 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
NUDC-201ENST00000321265 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
NUDC-201ENST00000321265 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
NUDC-201ENST00000321265 NCAPD3P42695 1498 aa31.51■■■□□ 2.64
NUDC-201ENST00000321265 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
NUDC-201ENST00000321265 HMGXB3Q12766 1538 aa31.45■■■□□ 2.63
NUDC-201ENST00000321265 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
NUDC-201ENST00000321265 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
NUDC-201ENST00000321265 CFTRP13569 1480 aa30.67■■■□□ 2.5
NUDC-201ENST00000321265 NESP48681 1621 aa30.66■■■□□ 2.5
NUDC-201ENST00000321265 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
NUDC-201ENST00000321265 LAMC3Q9Y6N6 1575 aa30.58■■■□□ 2.49
NUDC-201ENST00000321265 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
NUDC-201ENST00000321265 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
NUDC-201ENST00000321265 KIF21AQ7Z4S6 1674 aa30.34■■■□□ 2.45
NUDC-201ENST00000321265 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
NUDC-201ENST00000321265 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
NUDC-201ENST00000321265 CHIC1Q5VXU3 224 aa30.31■■■□□ 2.44
NUDC-201ENST00000321265 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
NUDC-201ENST00000321265 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
NUDC-201ENST00000321265 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
NUDC-201ENST00000321265 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
NUDC-201ENST00000321265 CUX1P39880 1505 aa30.1■■■□□ 2.41
NUDC-201ENST00000321265 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
NUDC-201ENST00000321265 BIVM-ERCC5R4GMW8 1640 aa30.03■■■□□ 2.4
NUDC-201ENST00000321265 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
NUDC-201ENST00000321265 MRC2Q9UBG0 1479 aa30■■■□□ 2.39
NUDC-201ENST00000321265 DNMBPQ6XZF7 1577 aa30■■■□□ 2.39
NUDC-201ENST00000321265 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
NUDC-201ENST00000321265 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
NUDC-201ENST00000321265 WDR62O43379 1518 aa29.87■■■□□ 2.37
NUDC-201ENST00000321265 FGD5Q6ZNL6 1462 aa29.86■■■□□ 2.37
NUDC-201ENST00000321265 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
NUDC-201ENST00000321265 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
NUDC-201ENST00000321265 CUX2O14529 1486 aa29.67■■■□□ 2.34
NUDC-201ENST00000321265 SOGA1O94964 1423 aa29.66■■■□□ 2.34
NUDC-201ENST00000321265 RUSC2Q8N2Y8 1516 aa29.6■■■□□ 2.33
NUDC-201ENST00000321265 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
NUDC-201ENST00000321265 FAM9AQ8IZU1 332 aaPredicted RBP29.59■■■□□ 2.33
NUDC-201ENST00000321265 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
NUDC-201ENST00000321265 ABCA10Q8WWZ4 1543 aa29.55■■■□□ 2.32
NUDC-201ENST00000321265 IFT140Q96RY7 1462 aa29.51■■■□□ 2.32
NUDC-201ENST00000321265 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
NUDC-201ENST00000321265 TDRD9Q8NDG6 1382 aaKnown RBP29.45■■■□□ 2.3
NUDC-201ENST00000321265 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
NUDC-201ENST00000321265 ABCA5Q8WWZ7 1642 aa29.4■■■□□ 2.3
NUDC-201ENST00000321265 EEA1Q15075 1411 aa29.39■■■□□ 2.3
NUDC-201ENST00000321265 AQRO60306 1485 aaKnown RBP eCLIP29.37■■■□□ 2.292e-8■■■■■ 34.4
NUDC-201ENST00000321265 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
NUDC-201ENST00000321265 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
NUDC-201ENST00000321265 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
NUDC-201ENST00000321265 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
NUDC-201ENST00000321265 IGF1RP08069 1367 aa29.25■■■□□ 2.27
NUDC-201ENST00000321265 EHMT2Q96KQ7 1210 aa29.24■■■□□ 2.27
NUDC-201ENST00000321265 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.26
NUDC-201ENST00000321265 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
NUDC-201ENST00000321265 LOC105371045A0A1W2PR82 267 aa29.17■■■□□ 2.26
NUDC-201ENST00000321265 CUL7Q14999 1698 aa29.13■■■□□ 2.25
NUDC-201ENST00000321265 PRXQ9BXM0 1461 aa29.12■■■□□ 2.25
NUDC-201ENST00000321265 KIF21BO75037 1637 aa29.12■■■□□ 2.25
NUDC-201ENST00000321265 CARMIL1Q5VZK9 1371 aa29.1■■■□□ 2.25
NUDC-201ENST00000321265 SNAPC4Q5SXM2 1469 aa29.09■■■□□ 2.25
NUDC-201ENST00000321265 RAPGEF2Q9Y4G8 1499 aa29.07■■■□□ 2.24
NUDC-201ENST00000321265 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
NUDC-201ENST00000321265 GOLGA3Q08378 1498 aa29.02■■■□□ 2.24
NUDC-201ENST00000321265 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
NUDC-201ENST00000321265 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
NUDC-201ENST00000321265 UBTFP17480 764 aaKnown RBP28.93■■■□□ 2.22
NUDC-201ENST00000321265 FBLN2P98095 1184 aa28.91■■■□□ 2.22
NUDC-201ENST00000321265 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
NUDC-201ENST00000321265 CHD1O14646 1710 aa28.86■■■□□ 2.21
NUDC-201ENST00000321265 CHMP7Q8WUX9 453 aaPredicted RBP28.85■■■□□ 2.21
NUDC-201ENST00000321265 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
NUDC-201ENST00000321265 TNIKQ9UKE5 1360 aa28.79■■■□□ 2.2
NUDC-201ENST00000321265 CTTNBP2Q8WZ74 1663 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms