Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.561e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-238ENST00000592412 532 ntTSL 418.35■□□□□ 0.531e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.15■□□□□ 0.51e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.02■□□□□ 0.481e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-208ENST00000586548 1734 ntTSL 317.84■□□□□ 0.451e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-243ENST00000593128 796 ntTSL 317.31■□□□□ 0.361e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.331e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.331e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.82■□□□□ 0.281e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-244ENST00000593283 758 ntTSL 516.77■□□□□ 0.281e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.23■□□□□ 0.191e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-241ENST00000593048 650 ntTSL 315.63■□□□□ 0.091e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.081e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-230ENST00000591055 928 ntTSL 215.43■□□□□ 0.061e-12■□□□□ 8.7
SRSF1Q07955 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.251e-12■□□□□ 8.7
SRSF1Q07955 FGFR1OP-205ENST00000494781 460 ntTSL 311.89□□□□□ -0.511e-12■□□□□ 8.7
SRSF1Q07955 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC9.69□□□□□ -0.861e-12■□□□□ 8.7
SRSF1Q07955 CIRBP-218ENST00000588344 370 ntTSL 38.05□□□□□ -1.121e-12■□□□□ 8.7
SRSF1Q07955 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.341e-12■□□□□ 8.7
SRSF1Q07955 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.22□□□□□ -1.731e-12■□□□□ 8.7
SRSF1Q07955 LRRC14-204ENST00000528528 1408 ntTSL 326.7■■□□□ 1.869e-6■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-203ENST00000586497 573 ntTSL 324.78■■□□□ 1.569e-6■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.459e-6■□□□□ 8.7
SRSF1Q07955 KLHDC10-202ENST00000463413 503 ntTSL 224.01■■□□□ 1.439e-6■□□□□ 8.7
SRSF1Q07955 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.392e-7■□□□□ 8.7
SRSF1Q07955 STUB1-209ENST00000567173 743 ntTSL 323.58■■□□□ 1.372e-7■□□□□ 8.7
SRSF1Q07955 STUB1-202ENST00000563505 894 ntTSL 223.27■■□□□ 1.322e-7■□□□□ 8.7
SRSF1Q07955 STUB1-211ENST00000569248 1853 ntTSL 523.18■■□□□ 1.32e-7■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.09■■□□□ 1.299e-6■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.72■■□□□ 1.239e-6■□□□□ 8.7
SRSF1Q07955 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.68■■□□□ 1.222e-7■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-207ENST00000588356 610 ntTSL 422.51■■□□□ 1.199e-6■□□□□ 8.7
SRSF1Q07955 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.85■■□□□ 1.099e-6■□□□□ 8.7
SRSF1Q07955 EML3-208ENST00000462626 463 ntTSL 220.38■□□□□ 0.859e-6■□□□□ 8.7
SRSF1Q07955 EML3-211ENST00000483199 1042 ntTSL 320.38■□□□□ 0.859e-6■□□□□ 8.7
SRSF1Q07955 E4F1-208ENST00000567111 691 ntTSL 220.19■□□□□ 0.822e-7■□□□□ 8.7
SRSF1Q07955 EML3-215ENST00000526116 581 ntTSL 320.03■□□□□ 0.89e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-211ENST00000443810 593 ntTSL 319.69■□□□□ 0.749e-6■□□□□ 8.7
SRSF1Q07955 MTHFR-207ENST00000418034 1034 ntTSL 319.53■□□□□ 0.722e-7■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.17■□□□□ 0.669e-6■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.08■□□□□ 0.649e-6■□□□□ 8.7
SRSF1Q07955 EML3-205ENST00000438258 493 ntTSL 418.89■□□□□ 0.619e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-203ENST00000412879 561 ntTSL 418.37■□□□□ 0.539e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-219ENST00000529439 556 ntTSL 518.13■□□□□ 0.499e-6■□□□□ 8.7
SRSF1Q07955 CDK10-219ENST00000567932 725 ntTSL 317.42■□□□□ 0.389e-6■□□□□ 8.7
SRSF1Q07955 TPM3-220ENST00000509601 543 ntTSL 417.12■□□□□ 0.332e-7■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-212ENST00000589791 1329 ntTSL 217.01■□□□□ 0.319e-6■□□□□ 8.7
SRSF1Q07955 TOP3B-217ENST00000489581 789 ntTSL 216.99■□□□□ 0.312e-7■□□□□ 8.7
SRSF1Q07955 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.249e-6■□□□□ 8.7
SRSF1Q07955 MAN2A2-229ENST00000561240 460 ntTSL 416.54■□□□□ 0.249e-6■□□□□ 8.7
SRSF1Q07955 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.42■□□□□ 0.222e-7■□□□□ 8.7
SRSF1Q07955 TCIRG1-205ENST00000525724 1864 ntTSL 516.32■□□□□ 0.29e-8■□□□□ 8.7
SRSF1Q07955 SLC25A17-214ENST00000458600 801 ntTSL 316.01■□□□□ 0.159e-6■□□□□ 8.7
SRSF1Q07955 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.88■□□□□ 0.132e-7■□□□□ 8.7
SRSF1Q07955 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.082e-7■□□□□ 8.7
SRSF1Q07955 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.069e-6■□□□□ 8.7
SRSF1Q07955 KLHDC4-215ENST00000566349 1377 ntTSL 215.4■□□□□ 0.069e-6■□□□□ 8.7
SRSF1Q07955 PIEZO1-205ENST00000472168 663 ntTSL 215.25■□□□□ 0.032e-7■□□□□ 8.7
SRSF1Q07955 ARFGAP2-212ENST00000527097 942 ntTSL 215.21■□□□□ 0.039e-6■□□□□ 8.7
SRSF1Q07955 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.021e-10■□□□□ 8.7
SRSF1Q07955 KLHDC4-225ENST00000569487 2072 ntTSL 215.12■□□□□ 0.019e-6■□□□□ 8.7
SRSF1Q07955 STUB1-210ENST00000567790 428 ntTSL 315.09■□□□□ 0.012e-7■□□□□ 8.7
SRSF1Q07955 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.04■□□□□ -09e-6■□□□□ 8.7
SRSF1Q07955 CDK10-216ENST00000561477 535 ntTSL 315.01□□□□□ -0.019e-6■□□□□ 8.7
SRSF1Q07955 TPM3-219ENST00000509409 1248 ntTSL 214.85□□□□□ -0.032e-7■□□□□ 8.7
SRSF1Q07955 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.079e-6■□□□□ 8.7
SRSF1Q07955 SF3B3-215ENST00000577085 529 ntTSL 414.6□□□□□ -0.079e-6■□□□□ 8.7
SRSF1Q07955 EML3-203ENST00000394776 2818 ntTSL 214.58□□□□□ -0.089e-6■□□□□ 8.7
SRSF1Q07955 MAN2A2-224ENST00000560616 988 ntTSL 514.52□□□□□ -0.099e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-204ENST00000524727 995 ntTSL 214.47□□□□□ -0.099e-6■□□□□ 8.7
SRSF1Q07955 WDR26-208ENST00000486652 2867 ntTSL 1 (best)14.31□□□□□ -0.129e-6■□□□□ 8.7
SRSF1Q07955 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.13□□□□□ -0.157e-8■□□□□ 8.7
SRSF1Q07955 E4F1-209ENST00000569796 5931 ntTSL 214.1□□□□□ -0.152e-7■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-208ENST00000588450 2858 ntTSL 214.05□□□□□ -0.169e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-209ENST00000526185 1723 ntTSL 213.78□□□□□ -0.29e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-222ENST00000530596 534 ntTSL 313.63□□□□□ -0.239e-6■□□□□ 8.7
SRSF1Q07955 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.249e-6■□□□□ 8.7
SRSF1Q07955 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.51□□□□□ -0.259e-6■□□□□ 8.7
SRSF1Q07955 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.51□□□□□ -0.259e-6■□□□□ 8.7
SRSF1Q07955 CDCA5-209ENST00000531401 858 ntTSL 513.51□□□□□ -0.259e-6■□□□□ 8.7
SRSF1Q07955 RRP1-202ENST00000471909 2544 ntTSL 1 (best)13.43□□□□□ -0.269e-6■□□□□ 8.7
SRSF1Q07955 MAN2A2-205ENST00000558171 790 ntTSL 513.41□□□□□ -0.269e-6■□□□□ 8.7
SRSF1Q07955 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.289e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-217ENST00000528444 730 ntTSL 513.2□□□□□ -0.39e-6■□□□□ 8.7
SRSF1Q07955 KLHDC4-223ENST00000568499 445 ntTSL 313.15□□□□□ -0.39e-6■□□□□ 8.7
SRSF1Q07955 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.319e-6■□□□□ 8.7
SRSF1Q07955 ZWINT-205ENST00000460654 830 ntTSL 313.1□□□□□ -0.319e-6■□□□□ 8.7
SRSF1Q07955 CDCA5-204ENST00000479032 1004 ntTSL 1 (best)13.02□□□□□ -0.339e-6■□□□□ 8.7
SRSF1Q07955 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.359e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-203ENST00000524586 548 ntTSL 412.8□□□□□ -0.369e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-207ENST00000525398 1000 ntTSL 312.8□□□□□ -0.369e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-206ENST00000427084 749 ntTSL 512.66□□□□□ -0.389e-6■□□□□ 8.7
SRSF1Q07955 NCAPD2-203ENST00000535804 537 ntTSL 312.57□□□□□ -0.49e-6■□□□□ 8.7
SRSF1Q07955 TPM3-216ENST00000473036 746 ntTSL 212.56□□□□□ -0.42e-7■□□□□ 8.7
SRSF1Q07955 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.38□□□□□ -0.432e-7■□□□□ 8.7
SRSF1Q07955 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.449e-6■□□□□ 8.7
SRSF1Q07955 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.459e-6■□□□□ 8.7
SRSF1Q07955 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.21□□□□□ -0.459e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-208ENST00000434185 565 ntTSL 412.18□□□□□ -0.469e-6■□□□□ 8.7
SRSF1Q07955 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.05□□□□□ -0.482e-7■□□□□ 8.7
Retrieved 100 of 14,836 protein–RNA pairs in 48.2 ms