RNA–Protein interactions for RNA: ENST00000479032.6

CDCA5-204, Transcript of cell division cycle associated 5, humanhuman

TSL 1 (best)

Gene CDCA5, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5-204ENST00000479032 NISCHQ9Y2I1 1504 aa34.22■■■■□ 3.07
CDCA5-204ENST00000479032 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
CDCA5-204ENST00000479032 ABCC9O60706 1549 aa29.86■■■□□ 2.37
CDCA5-204ENST00000479032 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
CDCA5-204ENST00000479032 DCAF8L2P0C7V8 631 aa28.66■■■□□ 2.18
CDCA5-204ENST00000479032 NACADO15069 1562 aa28.64■■■□□ 2.18
CDCA5-204ENST00000479032 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
CDCA5-204ENST00000479032 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
CDCA5-204ENST00000479032 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
CDCA5-204ENST00000479032 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
CDCA5-204ENST00000479032 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
CDCA5-204ENST00000479032 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
CDCA5-204ENST00000479032 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
CDCA5-204ENST00000479032 DNAJC5BQ9UF47 199 aa27.56■■■□□ 2
CDCA5-204ENST00000479032 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
CDCA5-204ENST00000479032 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
CDCA5-204ENST00000479032 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
CDCA5-204ENST00000479032 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
CDCA5-204ENST00000479032 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
CDCA5-204ENST00000479032 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
CDCA5-204ENST00000479032 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
CDCA5-204ENST00000479032 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
CDCA5-204ENST00000479032 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
CDCA5-204ENST00000479032 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
CDCA5-204ENST00000479032 PEG3Q9GZU2 1588 aa26.3■■□□□ 1.8
CDCA5-204ENST00000479032 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
CDCA5-204ENST00000479032 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
CDCA5-204ENST00000479032 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
CDCA5-204ENST00000479032 WIZO95785 1651 aa26.05■■□□□ 1.76
CDCA5-204ENST00000479032 NESP48681 1621 aa25.82■■□□□ 1.72
CDCA5-204ENST00000479032 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
CDCA5-204ENST00000479032 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
CDCA5-204ENST00000479032 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
CDCA5-204ENST00000479032 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
CDCA5-204ENST00000479032 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
CDCA5-204ENST00000479032 CFTRP13569 1480 aa25.52■■□□□ 1.68
CDCA5-204ENST00000479032 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
CDCA5-204ENST00000479032 CUX2O14529 1486 aa25.5■■□□□ 1.67
CDCA5-204ENST00000479032 KIF21AQ7Z4S6 1674 aa25.46■■□□□ 1.67
CDCA5-204ENST00000479032 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
CDCA5-204ENST00000479032 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
CDCA5-204ENST00000479032 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
CDCA5-204ENST00000479032 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
CDCA5-204ENST00000479032 MRC2Q9UBG0 1479 aa25.31■■□□□ 1.64
CDCA5-204ENST00000479032 WDR62O43379 1518 aa25.22■■□□□ 1.63
CDCA5-204ENST00000479032 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
CDCA5-204ENST00000479032 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
CDCA5-204ENST00000479032 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
CDCA5-204ENST00000479032 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
CDCA5-204ENST00000479032 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.58
CDCA5-204ENST00000479032 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
CDCA5-204ENST00000479032 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
CDCA5-204ENST00000479032 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
CDCA5-204ENST00000479032 CUX1P39880 1505 aa24.72■■□□□ 1.55
CDCA5-204ENST00000479032 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
CDCA5-204ENST00000479032 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
CDCA5-204ENST00000479032 SOGA1O94964 1423 aa24.66■■□□□ 1.54
CDCA5-204ENST00000479032 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
CDCA5-204ENST00000479032 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
CDCA5-204ENST00000479032 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.539e-7■■■■□ 20.3
CDCA5-204ENST00000479032 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
CDCA5-204ENST00000479032 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
CDCA5-204ENST00000479032 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
CDCA5-204ENST00000479032 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
CDCA5-204ENST00000479032 TOP2BQ02880 1626 aa24.49■■□□□ 1.51
CDCA5-204ENST00000479032 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
CDCA5-204ENST00000479032 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
CDCA5-204ENST00000479032 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
CDCA5-204ENST00000479032 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
CDCA5-204ENST00000479032 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
CDCA5-204ENST00000479032 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
CDCA5-204ENST00000479032 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
CDCA5-204ENST00000479032 FBLN2P98095 1184 aa24.3■■□□□ 1.48
CDCA5-204ENST00000479032 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
CDCA5-204ENST00000479032 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
CDCA5-204ENST00000479032 CHD1O14646 1710 aa24.25■■□□□ 1.47
CDCA5-204ENST00000479032 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
CDCA5-204ENST00000479032 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
CDCA5-204ENST00000479032 SYNJ2O15056 1496 aa24.2■■□□□ 1.47
CDCA5-204ENST00000479032 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
CDCA5-204ENST00000479032 FHAD1B1AJZ9 1412 aa24.08■■□□□ 1.44
CDCA5-204ENST00000479032 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
CDCA5-204ENST00000479032 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
CDCA5-204ENST00000479032 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
CDCA5-204ENST00000479032 CLASP1Q7Z460 1538 aa24.03■■□□□ 1.44
CDCA5-204ENST00000479032 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
CDCA5-204ENST00000479032 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
CDCA5-204ENST00000479032 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
CDCA5-204ENST00000479032 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
CDCA5-204ENST00000479032 IGF1RP08069 1367 aa24.01■■□□□ 1.43
CDCA5-204ENST00000479032 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
CDCA5-204ENST00000479032 NUP160Q12769 1436 aa23.95■■□□□ 1.42
CDCA5-204ENST00000479032 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
CDCA5-204ENST00000479032 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
CDCA5-204ENST00000479032 CUL7Q14999 1698 aa23.86■■□□□ 1.41
CDCA5-204ENST00000479032 CARMIL1Q5VZK9 1371 aa23.84■■□□□ 1.41
CDCA5-204ENST00000479032 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
CDCA5-204ENST00000479032 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
CDCA5-204ENST00000479032 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
CDCA5-204ENST00000479032 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms