RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 NISCHQ9Y2I1 1504 aa53.78■■■■■ 6.2
E4F1-208ENST00000567111 CCDC180Q9P1Z9 1646 aa47.56■■■■■ 5.2
E4F1-208ENST00000567111 ABCC9O60706 1549 aa46.16■■■■■ 4.98
E4F1-208ENST00000567111 DCAF8L2P0C7V8 631 aa44.98■■■■■ 4.79
E4F1-208ENST00000567111 ZCCHC6Q5VYS8 1495 aaKnown RBP44.83■■■■■ 4.77
E4F1-208ENST00000567111 NACADO15069 1562 aa44.69■■■■■ 4.74
E4F1-208ENST00000567111 RB1CC1Q8TDY2 1594 aa44.63■■■■■ 4.73
E4F1-208ENST00000567111 MYO15BQ96JP2 1530 aa44.55■■■■■ 4.72
E4F1-208ENST00000567111 DCAF1Q9Y4B6 1507 aa44.52■■■■■ 4.72
E4F1-208ENST00000567111 UNC13AQ9UPW8 1703 aa43.47■■■■■ 4.55
E4F1-208ENST00000567111 SCRIBQ14160 1630 aa43.42■■■■■ 4.54
E4F1-208ENST00000567111 PABPN1Q86U42 306 aaKnown RBP eCLIP43.28■■■■■ 4.521e-6■■■■□ 24.5
E4F1-208ENST00000567111 BICRAQ9NZM4 1560 aa43.14■■■■■ 4.5
E4F1-208ENST00000567111 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.45
E4F1-208ENST00000567111 EIF4G1Q04637 1599 aaKnown RBP42.01■■■■■ 4.32
E4F1-208ENST00000567111 DNAJC5BQ9UF47 199 aa41.95■■■■■ 4.31
E4F1-208ENST00000567111 CECR2Q9BXF3 1484 aa41.81■■■■■ 4.28
E4F1-208ENST00000567111 CC2D2AQ9P2K1 1620 aa41.73■■■■■ 4.27
E4F1-208ENST00000567111 BAZ1AQ9NRL2 1556 aaPredicted RBP41.67■■■■■ 4.26
E4F1-208ENST00000567111 SMARCA4P51532 1647 aa41.58■■■■■ 4.25
E4F1-208ENST00000567111 MROH2BQ7Z745 1585 aa41.42■■■■■ 4.22
E4F1-208ENST00000567111 SMARCA2P51531 1590 aa41.3■■■■■ 4.2
E4F1-208ENST00000567111 ATAD2BQ9ULI0 1458 aa41.29■■■■■ 4.2
E4F1-208ENST00000567111 NCAPD3P42695 1498 aa41.24■■■■■ 4.19
E4F1-208ENST00000567111 PEG3Q9GZU2 1588 aa41.16■■■■■ 4.18
E4F1-208ENST00000567111 RSF1Q96T23 1441 aaPredicted RBP41.16■■■■■ 4.18
E4F1-208ENST00000567111 HMGXB3Q12766 1538 aa41.01■■■■■ 4.16
E4F1-208ENST00000567111 BAZ1BQ9UIG0 1483 aaKnown RBP41.01■■■■■ 4.16
E4F1-208ENST00000567111 WIZO95785 1651 aa40.98■■■■■ 4.15
E4F1-208ENST00000567111 SUPT5HO00267 1087 aaKnown RBP40.61■■■■■ 4.09
E4F1-208ENST00000567111 TOP2AP11388 1531 aaKnown RBP40.6■■■■■ 4.09
E4F1-208ENST00000567111 CCDC88BA6NC98 1476 aa40.16■■■■■ 4.02
E4F1-208ENST00000567111 CADPSQ9ULU8 1353 aa40.1■■■■■ 4.01
E4F1-208ENST00000567111 LAMC3Q9Y6N6 1575 aa40.05■■■■■ 4
E4F1-208ENST00000567111 NESP48681 1621 aa40.02■■■■■ 4
E4F1-208ENST00000567111 CFTRP13569 1480 aa39.89■■■■□ 3.98
E4F1-208ENST00000567111 PDS5BQ9NTI5 1447 aa39.86■■■■□ 3.97
E4F1-208ENST00000567111 ERCC6Q03468 1493 aa39.81■■■■□ 3.96
E4F1-208ENST00000567111 FANCD2Q9BXW9 1451 aa39.59■■■■□ 3.93
E4F1-208ENST00000567111 PRDM2Q13029 1718 aa39.55■■■■□ 3.92
E4F1-208ENST00000567111 KIF21AQ7Z4S6 1674 aa39.53■■■■□ 3.92
E4F1-208ENST00000567111 CEP164Q9UPV0 1460 aa39.49■■■■□ 3.91
E4F1-208ENST00000567111 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
E4F1-208ENST00000567111 THOC2Q8NI27 1593 aaKnown RBP39.25■■■■□ 3.87
E4F1-208ENST00000567111 CUX2O14529 1486 aa39.18■■■■□ 3.86
E4F1-208ENST00000567111 WDR62O43379 1518 aa39.13■■■■□ 3.85
E4F1-208ENST00000567111 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
E4F1-208ENST00000567111 URB2Q14146 1524 aaKnown RBP39.1■■■■□ 3.85
E4F1-208ENST00000567111 TOPBP1Q92547 1522 aa38.99■■■■□ 3.83
E4F1-208ENST00000567111 DNMBPQ6XZF7 1577 aa38.97■■■■□ 3.83
E4F1-208ENST00000567111 WRNQ14191 1432 aaPredicted RBP eCLIP38.83■■■■□ 3.81
E4F1-208ENST00000567111 CUX1P39880 1505 aa38.82■■■■□ 3.8
E4F1-208ENST00000567111 IFT140Q96RY7 1462 aa38.67■■■■□ 3.78
E4F1-208ENST00000567111 POLA1P09884 1462 aaPredicted RBP38.66■■■■□ 3.78
E4F1-208ENST00000567111 FGD5Q6ZNL6 1462 aa38.65■■■■□ 3.78
E4F1-208ENST00000567111 TOP2BQ02880 1626 aa38.63■■■■□ 3.78
E4F1-208ENST00000567111 SOGA1O94964 1423 aa38.63■■■■□ 3.77
E4F1-208ENST00000567111 BIVM-ERCC5R4GMW8 1640 aa38.6■■■■□ 3.77
E4F1-208ENST00000567111 SYNJ1O43426 1573 aa38.59■■■■□ 3.77
E4F1-208ENST00000567111 RAD54L2Q9Y4B4 1467 aa38.51■■■■□ 3.76
E4F1-208ENST00000567111 TARBP1Q13395 1621 aaKnown RBP38.47■■■■□ 3.75
E4F1-208ENST00000567111 TRIM41Q8WV44 630 aa38.38■■■■□ 3.73
E4F1-208ENST00000567111 ZNF608Q9ULD9 1512 aaPredicted RBP38.38■■■■□ 3.73
E4F1-208ENST00000567111 TDRD9Q8NDG6 1382 aaKnown RBP38.32■■■■□ 3.73
E4F1-208ENST00000567111 ABCA10Q8WWZ4 1543 aa38.32■■■■□ 3.72
E4F1-208ENST00000567111 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
E4F1-208ENST00000567111 WDR97A6NE52 1622 aa38.25■■■■□ 3.71
E4F1-208ENST00000567111 EIF4G3O43432 1585 aaKnown RBP38.21■■■■□ 3.71
E4F1-208ENST00000567111 GAPVD1Q14C86 1478 aa38.15■■■■□ 3.7
E4F1-208ENST00000567111 CHIC1Q5VXU3 224 aa38.14■■■■□ 3.7
E4F1-208ENST00000567111 GRIN2BQ13224 1484 aa38.09■■■■□ 3.69
E4F1-208ENST00000567111 DNAJC5Q9H3Z4 198 aa38.06■■■■□ 3.68
E4F1-208ENST00000567111 ABCA5Q8WWZ7 1642 aa38.04■■■■□ 3.68
E4F1-208ENST00000567111 KIF27Q86VH2 1401 aa38.04■■■■□ 3.68
E4F1-208ENST00000567111 PBRM1Q86U86 1689 aa37.92■■■■□ 3.66
E4F1-208ENST00000567111 MAGI1Q96QZ7 1491 aaPredicted RBP37.91■■■■□ 3.66
E4F1-208ENST00000567111 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
E4F1-208ENST00000567111 FBLN2P98095 1184 aa37.88■■■■□ 3.65
E4F1-208ENST00000567111 ERICH3Q5RHP9 1530 aa37.87■■■■□ 3.65
E4F1-208ENST00000567111 CHMP7Q8WUX9 453 aaPredicted RBP37.86■■■■□ 3.65
E4F1-208ENST00000567111 IGF1RP08069 1367 aa37.8■■■■□ 3.64
E4F1-208ENST00000567111 OSCARQ8IYS5 282 aa37.8■■■■□ 3.64
E4F1-208ENST00000567111 SYNJ2O15056 1496 aa37.76■■■■□ 3.63
E4F1-208ENST00000567111 FHAD1B1AJZ9 1412 aa37.74■■■■□ 3.63
E4F1-208ENST00000567111 RUSC2Q8N2Y8 1516 aa37.71■■■■□ 3.63
E4F1-208ENST00000567111 CHD1O14646 1710 aa37.65■■■■□ 3.62
E4F1-208ENST00000567111 ADAMTS12P58397 1594 aa37.65■■■■□ 3.62
E4F1-208ENST00000567111 EEA1Q15075 1411 aa37.63■■■■□ 3.61
E4F1-208ENST00000567111 CARMIL1Q5VZK9 1371 aa37.61■■■■□ 3.61
E4F1-208ENST00000567111 CUL7Q14999 1698 aa37.6■■■■□ 3.61
E4F1-208ENST00000567111 CSRNP3Q8WYN3 585 aa37.58■■■■□ 3.61
E4F1-208ENST00000567111 GRIN2AQ12879 1464 aa37.55■■■■□ 3.6
E4F1-208ENST00000567111 FAM9AQ8IZU1 332 aaPredicted RBP37.52■■■■□ 3.6
E4F1-208ENST00000567111 RAPGEF2Q9Y4G8 1499 aa37.41■■■■□ 3.58
E4F1-208ENST00000567111 NUP160Q12769 1436 aa37.35■■■■□ 3.57
E4F1-208ENST00000567111 PRXQ9BXM0 1461 aa37.33■■■■□ 3.57
E4F1-208ENST00000567111 CEP170Q5SW79 1584 aa37.28■■■■□ 3.56
E4F1-208ENST00000567111 CLASP1Q7Z460 1538 aa37.26■■■■□ 3.55
E4F1-208ENST00000567111 KIAA0586Q9BVV6 1533 aa37.17■■■■□ 3.54
E4F1-208ENST00000567111 JPH4Q96JJ6 628 aa37.13■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms