RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 NISCHQ9Y2I1 1504 aa35.18■■■■□ 3.22
KLHDC4-223ENST00000568499 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
KLHDC4-223ENST00000568499 ABCC9O60706 1549 aa30.07■■■□□ 2.4
KLHDC4-223ENST00000568499 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
KLHDC4-223ENST00000568499 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
KLHDC4-223ENST00000568499 NACADO15069 1562 aa29.19■■■□□ 2.26
KLHDC4-223ENST00000568499 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
KLHDC4-223ENST00000568499 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
KLHDC4-223ENST00000568499 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
KLHDC4-223ENST00000568499 SCRIBQ14160 1630 aa28.39■■■□□ 2.13
KLHDC4-223ENST00000568499 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
KLHDC4-223ENST00000568499 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
KLHDC4-223ENST00000568499 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
KLHDC4-223ENST00000568499 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
KLHDC4-223ENST00000568499 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
KLHDC4-223ENST00000568499 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
KLHDC4-223ENST00000568499 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
KLHDC4-223ENST00000568499 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
KLHDC4-223ENST00000568499 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
KLHDC4-223ENST00000568499 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
KLHDC4-223ENST00000568499 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
KLHDC4-223ENST00000568499 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
KLHDC4-223ENST00000568499 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
KLHDC4-223ENST00000568499 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
KLHDC4-223ENST00000568499 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
KLHDC4-223ENST00000568499 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
KLHDC4-223ENST00000568499 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
KLHDC4-223ENST00000568499 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
KLHDC4-223ENST00000568499 WIZO95785 1651 aa26.79■■□□□ 1.88
KLHDC4-223ENST00000568499 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
KLHDC4-223ENST00000568499 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
KLHDC4-223ENST00000568499 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
KLHDC4-223ENST00000568499 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
KLHDC4-223ENST00000568499 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
KLHDC4-223ENST00000568499 NESP48681 1621 aa26.09■■□□□ 1.77
KLHDC4-223ENST00000568499 CFTRP13569 1480 aa26.08■■□□□ 1.77
KLHDC4-223ENST00000568499 PDS5BQ9NTI5 1447 aa26.04■■□□□ 1.76
KLHDC4-223ENST00000568499 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
KLHDC4-223ENST00000568499 FANCD2Q9BXW9 1451 aa25.87■■□□□ 1.73
KLHDC4-223ENST00000568499 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
KLHDC4-223ENST00000568499 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
KLHDC4-223ENST00000568499 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
KLHDC4-223ENST00000568499 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
KLHDC4-223ENST00000568499 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
KLHDC4-223ENST00000568499 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
KLHDC4-223ENST00000568499 WDR62O43379 1518 aa25.53■■□□□ 1.68
KLHDC4-223ENST00000568499 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
KLHDC4-223ENST00000568499 CUX2O14529 1486 aa25.52■■□□□ 1.68
KLHDC4-223ENST00000568499 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
KLHDC4-223ENST00000568499 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
KLHDC4-223ENST00000568499 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
KLHDC4-223ENST00000568499 CUX1P39880 1505 aa25.39■■□□□ 1.66
KLHDC4-223ENST00000568499 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
KLHDC4-223ENST00000568499 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
KLHDC4-223ENST00000568499 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
KLHDC4-223ENST00000568499 IFT140Q96RY7 1462 aa25.27■■□□□ 1.64
KLHDC4-223ENST00000568499 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
KLHDC4-223ENST00000568499 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
KLHDC4-223ENST00000568499 SOGA1O94964 1423 aa25.25■■□□□ 1.63
KLHDC4-223ENST00000568499 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
KLHDC4-223ENST00000568499 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
KLHDC4-223ENST00000568499 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
KLHDC4-223ENST00000568499 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
KLHDC4-223ENST00000568499 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
KLHDC4-223ENST00000568499 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
KLHDC4-223ENST00000568499 TDRD9Q8NDG6 1382 aaKnown RBP25.03■■□□□ 1.6
KLHDC4-223ENST00000568499 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
KLHDC4-223ENST00000568499 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.593e-9■■□□□ 14.2
KLHDC4-223ENST00000568499 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
KLHDC4-223ENST00000568499 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
KLHDC4-223ENST00000568499 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
KLHDC4-223ENST00000568499 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
KLHDC4-223ENST00000568499 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
KLHDC4-223ENST00000568499 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
KLHDC4-223ENST00000568499 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
KLHDC4-223ENST00000568499 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
KLHDC4-223ENST00000568499 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
KLHDC4-223ENST00000568499 EEA1Q15075 1411 aa24.74■■□□□ 1.55
KLHDC4-223ENST00000568499 IGF1RP08069 1367 aa24.73■■□□□ 1.55
KLHDC4-223ENST00000568499 FBLN2P98095 1184 aa24.73■■□□□ 1.55
KLHDC4-223ENST00000568499 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
KLHDC4-223ENST00000568499 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
KLHDC4-223ENST00000568499 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
KLHDC4-223ENST00000568499 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
KLHDC4-223ENST00000568499 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
KLHDC4-223ENST00000568499 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.54
KLHDC4-223ENST00000568499 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
KLHDC4-223ENST00000568499 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
KLHDC4-223ENST00000568499 CUL7Q14999 1698 aa24.62■■□□□ 1.53
KLHDC4-223ENST00000568499 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
KLHDC4-223ENST00000568499 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
KLHDC4-223ENST00000568499 CHD1O14646 1710 aa24.52■■□□□ 1.52
KLHDC4-223ENST00000568499 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
KLHDC4-223ENST00000568499 PRXQ9BXM0 1461 aa24.48■■□□□ 1.51
KLHDC4-223ENST00000568499 NUP160Q12769 1436 aa24.41■■□□□ 1.5
KLHDC4-223ENST00000568499 KIF21BO75037 1637 aa24.35■■□□□ 1.49
KLHDC4-223ENST00000568499 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
KLHDC4-223ENST00000568499 KIAA0586Q9BVV6 1533 aa24.31■■□□□ 1.48
KLHDC4-223ENST00000568499 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
KLHDC4-223ENST00000568499 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms