RNA–Protein interactions for RNA: ENST00000462626.1

EML3-208, Transcript of echinoderm microtubule associated protein like 3, humanhuman

TSL 2

Gene EML3, Length 463 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EML3-208ENST00000462626 NISCHQ9Y2I1 1504 aa52.61■■■■■ 6.01
EML3-208ENST00000462626 CCDC180Q9P1Z9 1646 aa47.1■■■■■ 5.13
EML3-208ENST00000462626 ABCC9O60706 1549 aa46.88■■■■■ 5.09
EML3-208ENST00000462626 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
EML3-208ENST00000462626 NACADO15069 1562 aa44.51■■■■■ 4.72
EML3-208ENST00000462626 DCAF8L2P0C7V8 631 aa44.22■■■■■ 4.67
EML3-208ENST00000462626 MYO15BQ96JP2 1530 aa44.01■■■■■ 4.64
EML3-208ENST00000462626 DNAJC5BQ9UF47 199 aa43.84■■■■■ 4.61
EML3-208ENST00000462626 PABPN1Q86U42 306 aaKnown RBP eCLIP43.69■■■■■ 4.58
EML3-208ENST00000462626 UNC13AQ9UPW8 1703 aa43.67■■■■■ 4.58
EML3-208ENST00000462626 ZCCHC6Q5VYS8 1495 aaKnown RBP43.65■■■■■ 4.58
EML3-208ENST00000462626 DCAF1Q9Y4B6 1507 aa43.51■■■■■ 4.56
EML3-208ENST00000462626 BICRAQ9NZM4 1560 aa43.45■■■■■ 4.55
EML3-208ENST00000462626 SHROOM4Q9ULL8 1493 aa42.93■■■■■ 4.46
EML3-208ENST00000462626 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
EML3-208ENST00000462626 CC2D2AQ9P2K1 1620 aa42.37■■■■■ 4.37
EML3-208ENST00000462626 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
EML3-208ENST00000462626 CECR2Q9BXF3 1484 aa42.23■■■■■ 4.35
EML3-208ENST00000462626 NCAPD3P42695 1498 aa41.11■■■■■ 4.17
EML3-208ENST00000462626 ATAD2BQ9ULI0 1458 aa40.99■■■■■ 4.15
EML3-208ENST00000462626 SMARCA4P51532 1647 aa40.97■■■■■ 4.15
EML3-208ENST00000462626 SMARCA2P51531 1590 aa40.87■■■■■ 4.13
EML3-208ENST00000462626 BAZ1AQ9NRL2 1556 aaPredicted RBP40.81■■■■■ 4.12
EML3-208ENST00000462626 HMGXB3Q12766 1538 aa40.8■■■■■ 4.12
EML3-208ENST00000462626 PEG3Q9GZU2 1588 aa40.62■■■■■ 4.09
EML3-208ENST00000462626 BAZ1BQ9UIG0 1483 aaKnown RBP40.58■■■■■ 4.09
EML3-208ENST00000462626 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
EML3-208ENST00000462626 ERCC6Q03468 1493 aa40.45■■■■■ 4.07
EML3-208ENST00000462626 CUX2O14529 1486 aa40.37■■■■■ 4.05
EML3-208ENST00000462626 NESP48681 1621 aa40.34■■■■■ 4.05
EML3-208ENST00000462626 DNAJC5Q9H3Z4 198 aa40.13■■■■■ 4.01
EML3-208ENST00000462626 LAMC3Q9Y6N6 1575 aa40.11■■■■■ 4.01
EML3-208ENST00000462626 WIZO95785 1651 aa40.01■■■■■ 4
EML3-208ENST00000462626 THOC2Q8NI27 1593 aaKnown RBP39.9■■■■□ 3.98
EML3-208ENST00000462626 PDS5BQ9NTI5 1447 aa39.89■■■■□ 3.98
EML3-208ENST00000462626 CADPSQ9ULU8 1353 aa39.85■■■■□ 3.97
EML3-208ENST00000462626 KIF21AQ7Z4S6 1674 aa39.79■■■■□ 3.96
EML3-208ENST00000462626 RSF1Q96T23 1441 aaPredicted RBP39.78■■■■□ 3.96
EML3-208ENST00000462626 TOP2AP11388 1531 aaKnown RBP39.55■■■■□ 3.92
EML3-208ENST00000462626 MRC2Q9UBG0 1479 aa39.52■■■■□ 3.92
EML3-208ENST00000462626 CFTRP13569 1480 aa39.45■■■■□ 3.91
EML3-208ENST00000462626 WDR62O43379 1518 aa39.43■■■■□ 3.9
EML3-208ENST00000462626 CEP164Q9UPV0 1460 aa39.39■■■■□ 3.9
EML3-208ENST00000462626 FANCD2Q9BXW9 1451 aa39.37■■■■□ 3.89
EML3-208ENST00000462626 CCDC88BA6NC98 1476 aa39.11■■■■□ 3.85
EML3-208ENST00000462626 URB2Q14146 1524 aaKnown RBP39.04■■■■□ 3.84
EML3-208ENST00000462626 PRDM2Q13029 1718 aa38.98■■■■□ 3.83
EML3-208ENST00000462626 TOPBP1Q92547 1522 aa38.65■■■■□ 3.78
EML3-208ENST00000462626 IFT140Q96RY7 1462 aa38.61■■■■□ 3.77
EML3-208ENST00000462626 ABCC8Q09428 1581 aa38.6■■■■□ 3.77
EML3-208ENST00000462626 OSCARQ8IYS5 282 aa38.55■■■■□ 3.76
EML3-208ENST00000462626 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
EML3-208ENST00000462626 DNMBPQ6XZF7 1577 aa38.53■■■■□ 3.76
EML3-208ENST00000462626 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
EML3-208ENST00000462626 EIF4G3O43432 1585 aaKnown RBP38.3■■■■□ 3.72
EML3-208ENST00000462626 TARBP1Q13395 1621 aaKnown RBP38.3■■■■□ 3.72
EML3-208ENST00000462626 POLA1P09884 1462 aaPredicted RBP38.28■■■■□ 3.72
EML3-208ENST00000462626 AQRO60306 1485 aaKnown RBP eCLIP38.2■■■■□ 3.71
EML3-208ENST00000462626 RAD54L2Q9Y4B4 1467 aa38.11■■■■□ 3.69
EML3-208ENST00000462626 SOGA1O94964 1423 aa38.1■■■■□ 3.69
EML3-208ENST00000462626 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
EML3-208ENST00000462626 CUX1P39880 1505 aa38.07■■■■□ 3.68
EML3-208ENST00000462626 FGD5Q6ZNL6 1462 aa38.06■■■■□ 3.68
EML3-208ENST00000462626 RIMBP3CA6NJZ7 1639 aa37.99■■■■□ 3.67
EML3-208ENST00000462626 RIMBP3BA6NNM3 1639 aa37.99■■■■□ 3.67
EML3-208ENST00000462626 RIMBP3Q9UFD9 1639 aa37.99■■■■□ 3.67
EML3-208ENST00000462626 TDRD9Q8NDG6 1382 aaKnown RBP37.99■■■■□ 3.67
EML3-208ENST00000462626 CHD1O14646 1710 aa37.95■■■■□ 3.67
EML3-208ENST00000462626 WDR97A6NE52 1622 aa37.94■■■■□ 3.66
EML3-208ENST00000462626 ARHGEF11O15085 1522 aa37.92■■■■□ 3.66
EML3-208ENST00000462626 FBLN2P98095 1184 aa37.86■■■■□ 3.65
EML3-208ENST00000462626 SNAPC4Q5SXM2 1469 aa37.81■■■■□ 3.64
EML3-208ENST00000462626 GRIN2BQ13224 1484 aa37.76■■■■□ 3.63
EML3-208ENST00000462626 MAGI1Q96QZ7 1491 aaPredicted RBP37.75■■■■□ 3.63
EML3-208ENST00000462626 ABCA10Q8WWZ4 1543 aa37.66■■■■□ 3.62
EML3-208ENST00000462626 CHMP7Q8WUX9 453 aaPredicted RBP37.65■■■■□ 3.62
EML3-208ENST00000462626 GAPVD1Q14C86 1478 aa37.64■■■■□ 3.62
EML3-208ENST00000462626 SYNJ2O15056 1496 aa37.61■■■■□ 3.61
EML3-208ENST00000462626 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
EML3-208ENST00000462626 CLASP1Q7Z460 1538 aa37.59■■■■□ 3.61
EML3-208ENST00000462626 ABCA5Q8WWZ7 1642 aa37.57■■■■□ 3.6
EML3-208ENST00000462626 ARAP1Q96P48 1450 aa37.57■■■■□ 3.6
EML3-208ENST00000462626 PBRM1Q86U86 1689 aa37.56■■■■□ 3.6
EML3-208ENST00000462626 SYNJ1O43426 1573 aa37.55■■■■□ 3.6
EML3-208ENST00000462626 WRNQ14191 1432 aaPredicted RBP eCLIP37.54■■■■□ 3.6
EML3-208ENST00000462626 TOP2BQ02880 1626 aa37.5■■■■□ 3.59
EML3-208ENST00000462626 BIVM-ERCC5R4GMW8 1640 aa37.49■■■■□ 3.59
EML3-208ENST00000462626 GRIN2AQ12879 1464 aa37.27■■■■□ 3.56
EML3-208ENST00000462626 ADAMTS12P58397 1594 aa37.26■■■■□ 3.56
EML3-208ENST00000462626 ERICH3Q5RHP9 1530 aa37.19■■■■□ 3.54
EML3-208ENST00000462626 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
EML3-208ENST00000462626 NUP160Q12769 1436 aa37.17■■■■□ 3.54
EML3-208ENST00000462626 CEP170Q5SW79 1584 aa37.11■■■■□ 3.53
EML3-208ENST00000462626 TRHP20396 242 aaPredicted RBP37.09■■■■□ 3.53
EML3-208ENST00000462626 ERCC6L2Q5T890 1561 aa36.99■■■■□ 3.51
EML3-208ENST00000462626 SHROOM2Q13796 1616 aa36.96■■■■□ 3.51
EML3-208ENST00000462626 KIF27Q86VH2 1401 aa36.79■■■■□ 3.48
EML3-208ENST00000462626 IGF1RP08069 1367 aa36.78■■■■□ 3.48
EML3-208ENST00000462626 JPH4Q96JJ6 628 aa36.76■■■■□ 3.48
EML3-208ENST00000462626 PRG4Q92954 1404 aaPredicted RBP36.76■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms