RNA–Protein interactions for RNA: ENST00000563505.5

STUB1-202, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 894 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-202ENST00000563505 NISCHQ9Y2I1 1504 aa59.85■■■■■ 7.17
STUB1-202ENST00000563505 CCDC180Q9P1Z9 1646 aa53.4■■■■■ 6.14
STUB1-202ENST00000563505 ABCC9O60706 1549 aa53.32■■■■■ 6.13
STUB1-202ENST00000563505 RB1CC1Q8TDY2 1594 aa50.82■■■■■ 5.73
STUB1-202ENST00000563505 NACADO15069 1562 aa50.49■■■■■ 5.67
STUB1-202ENST00000563505 DCAF8L2P0C7V8 631 aa50.27■■■■■ 5.64
STUB1-202ENST00000563505 DNAJC5BQ9UF47 199 aa49.97■■■■■ 5.59
STUB1-202ENST00000563505 MYO15BQ96JP2 1530 aa49.93■■■■■ 5.58
STUB1-202ENST00000563505 ZCCHC6Q5VYS8 1495 aaKnown RBP49.69■■■■■ 5.55
STUB1-202ENST00000563505 UNC13AQ9UPW8 1703 aa49.65■■■■■ 5.54
STUB1-202ENST00000563505 PABPN1Q86U42 306 aaKnown RBP eCLIP49.63■■■■■ 5.54
STUB1-202ENST00000563505 DCAF1Q9Y4B6 1507 aa49.48■■■■■ 5.51
STUB1-202ENST00000563505 BICRAQ9NZM4 1560 aa49.28■■■■■ 5.48
STUB1-202ENST00000563505 SHROOM4Q9ULL8 1493 aa48.72■■■■■ 5.39
STUB1-202ENST00000563505 SCRIBQ14160 1630 aa48.65■■■■■ 5.38
STUB1-202ENST00000563505 CC2D2AQ9P2K1 1620 aa48.2■■■■■ 5.31
STUB1-202ENST00000563505 EIF4G1Q04637 1599 aaKnown RBP48.09■■■■■ 5.29
STUB1-202ENST00000563505 CECR2Q9BXF3 1484 aa48.06■■■■■ 5.28
STUB1-202ENST00000563505 NCAPD3P42695 1498 aa46.6■■■■■ 5.05
STUB1-202ENST00000563505 SMARCA4P51532 1647 aa46.5■■■■■ 5.04
STUB1-202ENST00000563505 ATAD2BQ9ULI0 1458 aa46.5■■■■■ 5.03
STUB1-202ENST00000563505 BAZ1AQ9NRL2 1556 aaPredicted RBP46.37■■■■■ 5.01
STUB1-202ENST00000563505 SMARCA2P51531 1590 aa46.35■■■■■ 5.01
STUB1-202ENST00000563505 HMGXB3Q12766 1538 aa46.25■■■■■ 4.99
STUB1-202ENST00000563505 MROH2BQ7Z745 1585 aa46.11■■■■■ 4.97
STUB1-202ENST00000563505 PEG3Q9GZU2 1588 aa46.1■■■■■ 4.97
STUB1-202ENST00000563505 ERCC6Q03468 1493 aa46.08■■■■■ 4.97
STUB1-202ENST00000563505 CUX2O14529 1486 aa46.01■■■■■ 4.96
STUB1-202ENST00000563505 BAZ1BQ9UIG0 1483 aaKnown RBP46.01■■■■■ 4.96
STUB1-202ENST00000563505 DNAJC5Q9H3Z4 198 aa45.95■■■■■ 4.95
STUB1-202ENST00000563505 NESP48681 1621 aa45.79■■■■■ 4.92
STUB1-202ENST00000563505 LAMC3Q9Y6N6 1575 aa45.55■■■■■ 4.88
STUB1-202ENST00000563505 WIZO95785 1651 aa45.52■■■■■ 4.88
STUB1-202ENST00000563505 RSF1Q96T23 1441 aaPredicted RBP45.4■■■■■ 4.86
STUB1-202ENST00000563505 THOC2Q8NI27 1593 aaKnown RBP45.36■■■■■ 4.85
STUB1-202ENST00000563505 PDS5BQ9NTI5 1447 aa45.3■■■■■ 4.84
STUB1-202ENST00000563505 KIF21AQ7Z4S6 1674 aa45.24■■■■■ 4.83
STUB1-202ENST00000563505 CADPSQ9ULU8 1353 aa45.2■■■■■ 4.83
STUB1-202ENST00000563505 TOP2AP11388 1531 aaKnown RBP45.01■■■■■ 4.8
STUB1-202ENST00000563505 MRC2Q9UBG0 1479 aa44.88■■■■■ 4.78
STUB1-202ENST00000563505 CFTRP13569 1480 aa44.78■■■■■ 4.76
STUB1-202ENST00000563505 WDR62O43379 1518 aa44.76■■■■■ 4.76
STUB1-202ENST00000563505 CEP164Q9UPV0 1460 aa44.71■■■■■ 4.75
STUB1-202ENST00000563505 FANCD2Q9BXW9 1451 aa44.65■■■■■ 4.74
STUB1-202ENST00000563505 CCDC88BA6NC98 1476 aa44.56■■■■■ 4.72
STUB1-202ENST00000563505 URB2Q14146 1524 aaKnown RBP44.25■■■■■ 4.67
STUB1-202ENST00000563505 PRDM2Q13029 1718 aa44.25■■■■■ 4.67
STUB1-202ENST00000563505 OSCARQ8IYS5 282 aa43.93■■■■■ 4.62
STUB1-202ENST00000563505 TRIM41Q8WV44 630 aa43.91■■■■■ 4.62
STUB1-202ENST00000563505 TOPBP1Q92547 1522 aa43.83■■■■■ 4.61
STUB1-202ENST00000563505 IFT140Q96RY7 1462 aa43.83■■■■■ 4.61
STUB1-202ENST00000563505 ABCC8Q09428 1581 aa43.78■■■■■ 4.6
STUB1-202ENST00000563505 SUPT5HO00267 1087 aaKnown RBP43.76■■■■■ 4.6
STUB1-202ENST00000563505 ZNF608Q9ULD9 1512 aaPredicted RBP43.69■■■■■ 4.59
STUB1-202ENST00000563505 DNMBPQ6XZF7 1577 aa43.69■■■■■ 4.58
STUB1-202ENST00000563505 EIF4G3O43432 1585 aaKnown RBP43.48■■■■■ 4.55
STUB1-202ENST00000563505 POLA1P09884 1462 aaPredicted RBP43.44■■■■■ 4.54
STUB1-202ENST00000563505 TARBP1Q13395 1621 aaKnown RBP43.4■■■■■ 4.54
STUB1-202ENST00000563505 AQRO60306 1485 aaKnown RBP eCLIP43.32■■■■■ 4.531e-6■■■■□ 24.9
STUB1-202ENST00000563505 RIMBP3CA6NJZ7 1639 aa43.3■■■■■ 4.52
STUB1-202ENST00000563505 RIMBP3BA6NNM3 1639 aa43.3■■■■■ 4.52
STUB1-202ENST00000563505 RIMBP3Q9UFD9 1639 aa43.3■■■■■ 4.52
STUB1-202ENST00000563505 CUX1P39880 1505 aa43.28■■■■■ 4.52
STUB1-202ENST00000563505 RAD54L2Q9Y4B4 1467 aa43.28■■■■■ 4.52
STUB1-202ENST00000563505 SOGA1O94964 1423 aa43.27■■■■■ 4.52
STUB1-202ENST00000563505 FGD5Q6ZNL6 1462 aa43.22■■■■■ 4.51
STUB1-202ENST00000563505 ARHGEF11O15085 1522 aa43.17■■■■■ 4.5
STUB1-202ENST00000563505 CHD1O14646 1710 aa43.17■■■■■ 4.5
STUB1-202ENST00000563505 TDRD9Q8NDG6 1382 aaKnown RBP43.13■■■■■ 4.49
STUB1-202ENST00000563505 FBLN2P98095 1184 aa43.06■■■■■ 4.48
STUB1-202ENST00000563505 WDR97A6NE52 1622 aa43.04■■■■■ 4.48
STUB1-202ENST00000563505 SNAPC4Q5SXM2 1469 aa42.88■■■■■ 4.46
STUB1-202ENST00000563505 CYB5RLQ6IPT4 315 aa42.87■■■■■ 4.45
STUB1-202ENST00000563505 MAGI1Q96QZ7 1491 aaPredicted RBP42.81■■■■■ 4.44
STUB1-202ENST00000563505 GRIN2BQ13224 1484 aa42.81■■■■■ 4.44
STUB1-202ENST00000563505 ABCA10Q8WWZ4 1543 aa42.79■■■■■ 4.44
STUB1-202ENST00000563505 CHMP7Q8WUX9 453 aaPredicted RBP42.78■■■■■ 4.44
STUB1-202ENST00000563505 WRNQ14191 1432 aaPredicted RBP eCLIP42.78■■■■■ 4.44
STUB1-202ENST00000563505 GAPVD1Q14C86 1478 aa42.73■■■■■ 4.43
STUB1-202ENST00000563505 ARAP1Q96P48 1450 aa42.73■■■■■ 4.43
STUB1-202ENST00000563505 TOP2BQ02880 1626 aa42.7■■■■■ 4.43
STUB1-202ENST00000563505 SYNJ1O43426 1573 aa42.69■■■■■ 4.42
STUB1-202ENST00000563505 BIVM-ERCC5R4GMW8 1640 aa42.67■■■■■ 4.42
STUB1-202ENST00000563505 CLASP1Q7Z460 1538 aa42.66■■■■■ 4.42
STUB1-202ENST00000563505 SYNJ2O15056 1496 aa42.66■■■■■ 4.42
STUB1-202ENST00000563505 PBRM1Q86U86 1689 aa42.63■■■■■ 4.41
STUB1-202ENST00000563505 ABCA5Q8WWZ7 1642 aa42.61■■■■■ 4.41
STUB1-202ENST00000563505 TRHP20396 242 aaPredicted RBP42.39■■■■■ 4.38
STUB1-202ENST00000563505 GRIN2AQ12879 1464 aa42.24■■■■■ 4.35
STUB1-202ENST00000563505 ADAMTS12P58397 1594 aa42.24■■■■■ 4.35
STUB1-202ENST00000563505 ERICH3Q5RHP9 1530 aa42.24■■■■■ 4.35
STUB1-202ENST00000563505 FHAD1B1AJZ9 1412 aa42.22■■■■■ 4.35
STUB1-202ENST00000563505 NUP160Q12769 1436 aa42.12■■■■■ 4.33
STUB1-202ENST00000563505 CEP170Q5SW79 1584 aa42.06■■■■■ 4.32
STUB1-202ENST00000563505 ERCC6L2Q5T890 1561 aa41.96■■■■■ 4.31
STUB1-202ENST00000563505 KIF27Q86VH2 1401 aa41.93■■■■■ 4.3
STUB1-202ENST00000563505 IGF1RP08069 1367 aa41.92■■■■■ 4.3
STUB1-202ENST00000563505 SHROOM2Q13796 1616 aa41.91■■■■■ 4.3
STUB1-202ENST00000563505 JPH4Q96JJ6 628 aa41.74■■■■■ 4.27
STUB1-202ENST00000563505 PRG4Q92954 1404 aaPredicted RBP41.69■■■■■ 4.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms