RNA–Protein interactions for RNA: ENST00000567173.5

STUB1-209, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-209ENST00000567173 NISCHQ9Y2I1 1504 aa62.4■■■■■ 7.58
STUB1-209ENST00000567173 CCDC180Q9P1Z9 1646 aa55.53■■■■■ 6.48
STUB1-209ENST00000567173 ABCC9O60706 1549 aa54.16■■■■■ 6.26
STUB1-209ENST00000567173 RB1CC1Q8TDY2 1594 aa52.21■■■■■ 5.95
STUB1-209ENST00000567173 NACADO15069 1562 aa52.18■■■■■ 5.94
STUB1-209ENST00000567173 ZCCHC6Q5VYS8 1495 aaKnown RBP51.99■■■■■ 5.91
STUB1-209ENST00000567173 MYO15BQ96JP2 1530 aa51.95■■■■■ 5.91
STUB1-209ENST00000567173 DCAF8L2P0C7V8 631 aa51.92■■■■■ 5.9
STUB1-209ENST00000567173 DCAF1Q9Y4B6 1507 aa51.71■■■■■ 5.87
STUB1-209ENST00000567173 UNC13AQ9UPW8 1703 aa51.07■■■■■ 5.77
STUB1-209ENST00000567173 BICRAQ9NZM4 1560 aa50.64■■■■■ 5.7
STUB1-209ENST00000567173 PABPN1Q86U42 306 aaKnown RBP eCLIP50.58■■■■■ 5.69
STUB1-209ENST00000567173 SCRIBQ14160 1630 aa50.54■■■■■ 5.68
STUB1-209ENST00000567173 SHROOM4Q9ULL8 1493 aa50.18■■■■■ 5.62
STUB1-209ENST00000567173 DNAJC5BQ9UF47 199 aa49.72■■■■■ 5.55
STUB1-209ENST00000567173 EIF4G1Q04637 1599 aaKnown RBP49.28■■■■■ 5.48
STUB1-209ENST00000567173 CC2D2AQ9P2K1 1620 aa49.06■■■■■ 5.44
STUB1-209ENST00000567173 CECR2Q9BXF3 1484 aa48.7■■■■■ 5.39
STUB1-209ENST00000567173 SMARCA4P51532 1647 aa48.41■■■■■ 5.34
STUB1-209ENST00000567173 BAZ1AQ9NRL2 1556 aaPredicted RBP48.36■■■■■ 5.33
STUB1-209ENST00000567173 NCAPD3P42695 1498 aa48.15■■■■■ 5.3
STUB1-209ENST00000567173 ATAD2BQ9ULI0 1458 aa48.14■■■■■ 5.3
STUB1-209ENST00000567173 SMARCA2P51531 1590 aa48.1■■■■■ 5.29
STUB1-209ENST00000567173 MROH2BQ7Z745 1585 aa48.05■■■■■ 5.28
STUB1-209ENST00000567173 PEG3Q9GZU2 1588 aa48■■■■■ 5.28
STUB1-209ENST00000567173 HMGXB3Q12766 1538 aa47.91■■■■■ 5.26
STUB1-209ENST00000567173 BAZ1BQ9UIG0 1483 aaKnown RBP47.72■■■■■ 5.23
STUB1-209ENST00000567173 WIZO95785 1651 aa47.54■■■■■ 5.2
STUB1-209ENST00000567173 RSF1Q96T23 1441 aaPredicted RBP47.53■■■■■ 5.2
STUB1-209ENST00000567173 TOP2AP11388 1531 aaKnown RBP47.05■■■■■ 5.12
STUB1-209ENST00000567173 NESP48681 1621 aa46.89■■■■■ 5.1
STUB1-209ENST00000567173 LAMC3Q9Y6N6 1575 aa46.87■■■■■ 5.09
STUB1-209ENST00000567173 CADPSQ9ULU8 1353 aa46.71■■■■■ 5.07
STUB1-209ENST00000567173 ERCC6Q03468 1493 aa46.68■■■■■ 5.06
STUB1-209ENST00000567173 PDS5BQ9NTI5 1447 aa46.52■■■■■ 5.04
STUB1-209ENST00000567173 CCDC88BA6NC98 1476 aa46.49■■■■■ 5.03
STUB1-209ENST00000567173 CFTRP13569 1480 aa46.45■■■■■ 5.03
STUB1-209ENST00000567173 KIF21AQ7Z4S6 1674 aa46.39■■■■■ 5.02
STUB1-209ENST00000567173 CUX2O14529 1486 aa46.27■■■■■ 5
STUB1-209ENST00000567173 THOC2Q8NI27 1593 aaKnown RBP46.25■■■■■ 4.99
STUB1-209ENST00000567173 SUPT5HO00267 1087 aaKnown RBP46.18■■■■■ 4.98
STUB1-209ENST00000567173 PRDM2Q13029 1718 aa46.17■■■■■ 4.98
STUB1-209ENST00000567173 FANCD2Q9BXW9 1451 aa46.14■■■■■ 4.98
STUB1-209ENST00000567173 CEP164Q9UPV0 1460 aa46.09■■■■■ 4.97
STUB1-209ENST00000567173 MRC2Q9UBG0 1479 aa46.03■■■■■ 4.96
STUB1-209ENST00000567173 WDR62O43379 1518 aa45.91■■■■■ 4.94
STUB1-209ENST00000567173 URB2Q14146 1524 aaKnown RBP45.7■■■■■ 4.91
STUB1-209ENST00000567173 ABCC8Q09428 1581 aa45.48■■■■■ 4.87
STUB1-209ENST00000567173 TOPBP1Q92547 1522 aa45.42■■■■■ 4.86
STUB1-209ENST00000567173 DNMBPQ6XZF7 1577 aa45.39■■■■■ 4.86
STUB1-209ENST00000567173 IFT140Q96RY7 1462 aa45.14■■■■■ 4.82
STUB1-209ENST00000567173 CUX1P39880 1505 aa45.09■■■■■ 4.81
STUB1-209ENST00000567173 POLA1P09884 1462 aaPredicted RBP45.04■■■■■ 4.8
STUB1-209ENST00000567173 TARBP1Q13395 1621 aaKnown RBP44.97■■■■■ 4.79
STUB1-209ENST00000567173 FGD5Q6ZNL6 1462 aa44.91■■■■■ 4.78
STUB1-209ENST00000567173 ZNF608Q9ULD9 1512 aaPredicted RBP44.9■■■■■ 4.78
STUB1-209ENST00000567173 SOGA1O94964 1423 aa44.84■■■■■ 4.77
STUB1-209ENST00000567173 DNAJC5Q9H3Z4 198 aa44.81■■■■■ 4.76
STUB1-209ENST00000567173 RAD54L2Q9Y4B4 1467 aa44.79■■■■■ 4.76
STUB1-209ENST00000567173 WRNQ14191 1432 aaPredicted RBP eCLIP44.78■■■■■ 4.76
STUB1-209ENST00000567173 EIF4G3O43432 1585 aaKnown RBP44.75■■■■■ 4.75
STUB1-209ENST00000567173 BIVM-ERCC5R4GMW8 1640 aa44.75■■■■■ 4.75
STUB1-209ENST00000567173 TOP2BQ02880 1626 aa44.74■■■■■ 4.75
STUB1-209ENST00000567173 SYNJ1O43426 1573 aa44.69■■■■■ 4.74
STUB1-209ENST00000567173 WDR97A6NE52 1622 aa44.67■■■■■ 4.74
STUB1-209ENST00000567173 AQRO60306 1485 aaKnown RBP eCLIP44.64■■■■■ 4.741e-6■■■■□ 24.9
STUB1-209ENST00000567173 TDRD9Q8NDG6 1382 aaKnown RBP44.55■■■■■ 4.72
STUB1-209ENST00000567173 ABCA10Q8WWZ4 1543 aa44.53■■■■■ 4.72
STUB1-209ENST00000567173 ABCA5Q8WWZ7 1642 aa44.35■■■■■ 4.69
STUB1-209ENST00000567173 GRIN2BQ13224 1484 aa44.34■■■■■ 4.69
STUB1-209ENST00000567173 GAPVD1Q14C86 1478 aa44.34■■■■■ 4.69
STUB1-209ENST00000567173 OSCARQ8IYS5 282 aa44.31■■■■■ 4.68
STUB1-209ENST00000567173 PBRM1Q86U86 1689 aa44.26■■■■■ 4.68
STUB1-209ENST00000567173 MAGI1Q96QZ7 1491 aaPredicted RBP44.24■■■■■ 4.67
STUB1-209ENST00000567173 SNAPC4Q5SXM2 1469 aa44.23■■■■■ 4.67
STUB1-209ENST00000567173 CHD1O14646 1710 aa44.2■■■■■ 4.67
STUB1-209ENST00000567173 SYNJ2O15056 1496 aa44.05■■■■■ 4.64
STUB1-209ENST00000567173 ERICH3Q5RHP9 1530 aa44.01■■■■■ 4.64
STUB1-209ENST00000567173 FBLN2P98095 1184 aa44.01■■■■■ 4.64
STUB1-209ENST00000567173 CHMP7Q8WUX9 453 aaPredicted RBP43.96■■■■■ 4.63
STUB1-209ENST00000567173 ADAMTS12P58397 1594 aa43.91■■■■■ 4.62
STUB1-209ENST00000567173 KIF27Q86VH2 1401 aa43.86■■■■■ 4.61
STUB1-209ENST00000567173 FHAD1B1AJZ9 1412 aa43.83■■■■■ 4.61
STUB1-209ENST00000567173 GRIN2AQ12879 1464 aa43.76■■■■■ 4.6
STUB1-209ENST00000567173 CLASP1Q7Z460 1538 aa43.74■■■■■ 4.59
STUB1-209ENST00000567173 IGF1RP08069 1367 aa43.69■■■■■ 4.59
STUB1-209ENST00000567173 TRIM41Q8WV44 630 aa43.68■■■■■ 4.58
STUB1-209ENST00000567173 RIMBP3CA6NJZ7 1639 aa43.62■■■■■ 4.57
STUB1-209ENST00000567173 RIMBP3BA6NNM3 1639 aa43.62■■■■■ 4.57
STUB1-209ENST00000567173 RIMBP3Q9UFD9 1639 aa43.62■■■■■ 4.57
STUB1-209ENST00000567173 CUL7Q14999 1698 aa43.61■■■■■ 4.57
STUB1-209ENST00000567173 ARHGEF11O15085 1522 aa43.6■■■■■ 4.57
STUB1-209ENST00000567173 NUP160Q12769 1436 aa43.6■■■■■ 4.57
STUB1-209ENST00000567173 CEP170Q5SW79 1584 aa43.54■■■■■ 4.56
STUB1-209ENST00000567173 RUSC2Q8N2Y8 1516 aa43.43■■■■■ 4.54
STUB1-209ENST00000567173 CARMIL1Q5VZK9 1371 aa43.41■■■■■ 4.54
STUB1-209ENST00000567173 SHROOM2Q13796 1616 aa43.3■■■■■ 4.52
STUB1-209ENST00000567173 ARAP1Q96P48 1450 aa43.25■■■■■ 4.51
STUB1-209ENST00000567173 CHIC1Q5VXU3 224 aa43.19■■■■■ 4.5
STUB1-209ENST00000567173 KIAA0586Q9BVV6 1533 aa43.17■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms