RNA–Protein interactions for RNA: ENST00000535804.1

NCAPD2-203, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 537 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-203ENST00000535804 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
NCAPD2-203ENST00000535804 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
NCAPD2-203ENST00000535804 ABCC9O60706 1549 aa28.99■■■□□ 2.23
NCAPD2-203ENST00000535804 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
NCAPD2-203ENST00000535804 NACADO15069 1562 aa27.56■■■□□ 2
NCAPD2-203ENST00000535804 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
NCAPD2-203ENST00000535804 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
NCAPD2-203ENST00000535804 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
NCAPD2-203ENST00000535804 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
NCAPD2-203ENST00000535804 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
NCAPD2-203ENST00000535804 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
NCAPD2-203ENST00000535804 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
NCAPD2-203ENST00000535804 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
NCAPD2-203ENST00000535804 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
NCAPD2-203ENST00000535804 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
NCAPD2-203ENST00000535804 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
NCAPD2-203ENST00000535804 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
NCAPD2-203ENST00000535804 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
NCAPD2-203ENST00000535804 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
NCAPD2-203ENST00000535804 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
NCAPD2-203ENST00000535804 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
NCAPD2-203ENST00000535804 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
NCAPD2-203ENST00000535804 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
NCAPD2-203ENST00000535804 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
NCAPD2-203ENST00000535804 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
NCAPD2-203ENST00000535804 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
NCAPD2-203ENST00000535804 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
NCAPD2-203ENST00000535804 WIZO95785 1651 aa25.08■■□□□ 1.61
NCAPD2-203ENST00000535804 NESP48681 1621 aa25.03■■□□□ 1.6
NCAPD2-203ENST00000535804 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
NCAPD2-203ENST00000535804 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
NCAPD2-203ENST00000535804 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
NCAPD2-203ENST00000535804 CUX2O14529 1486 aa24.75■■□□□ 1.55
NCAPD2-203ENST00000535804 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
NCAPD2-203ENST00000535804 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
NCAPD2-203ENST00000535804 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
NCAPD2-203ENST00000535804 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
NCAPD2-203ENST00000535804 PDS5BQ9NTI5 1447 aa24.63■■□□□ 1.53
NCAPD2-203ENST00000535804 CFTRP13569 1480 aa24.48■■□□□ 1.51
NCAPD2-203ENST00000535804 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
NCAPD2-203ENST00000535804 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
NCAPD2-203ENST00000535804 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
NCAPD2-203ENST00000535804 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
NCAPD2-203ENST00000535804 WDR62O43379 1518 aa24.39■■□□□ 1.49
NCAPD2-203ENST00000535804 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
NCAPD2-203ENST00000535804 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
NCAPD2-203ENST00000535804 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
NCAPD2-203ENST00000535804 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
NCAPD2-203ENST00000535804 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
NCAPD2-203ENST00000535804 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
NCAPD2-203ENST00000535804 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
NCAPD2-203ENST00000535804 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
NCAPD2-203ENST00000535804 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
NCAPD2-203ENST00000535804 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
NCAPD2-203ENST00000535804 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
NCAPD2-203ENST00000535804 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
NCAPD2-203ENST00000535804 CUX1P39880 1505 aa23.78■■□□□ 1.4
NCAPD2-203ENST00000535804 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
NCAPD2-203ENST00000535804 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
NCAPD2-203ENST00000535804 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.382e-11■■■■■ 28.5
NCAPD2-203ENST00000535804 SOGA1O94964 1423 aa23.67■■□□□ 1.38
NCAPD2-203ENST00000535804 OSCARQ8IYS5 282 aa23.64■■□□□ 1.37
NCAPD2-203ENST00000535804 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
NCAPD2-203ENST00000535804 CHD1O14646 1710 aa23.59■■□□□ 1.37
NCAPD2-203ENST00000535804 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
NCAPD2-203ENST00000535804 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
NCAPD2-203ENST00000535804 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
NCAPD2-203ENST00000535804 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
NCAPD2-203ENST00000535804 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
NCAPD2-203ENST00000535804 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
NCAPD2-203ENST00000535804 FBLN2P98095 1184 aa23.47■■□□□ 1.35
NCAPD2-203ENST00000535804 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
NCAPD2-203ENST00000535804 PBRM1Q86U86 1689 aa23.47■■□□□ 1.35
NCAPD2-203ENST00000535804 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
NCAPD2-203ENST00000535804 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
NCAPD2-203ENST00000535804 RIMBP3CA6NJZ7 1639 aa23.42■■□□□ 1.34
NCAPD2-203ENST00000535804 RIMBP3BA6NNM3 1639 aa23.42■■□□□ 1.34
NCAPD2-203ENST00000535804 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
NCAPD2-203ENST00000535804 RIMBP3Q9UFD9 1639 aa23.42■■□□□ 1.34
NCAPD2-203ENST00000535804 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
NCAPD2-203ENST00000535804 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
NCAPD2-203ENST00000535804 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
NCAPD2-203ENST00000535804 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
NCAPD2-203ENST00000535804 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
NCAPD2-203ENST00000535804 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
NCAPD2-203ENST00000535804 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
NCAPD2-203ENST00000535804 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
NCAPD2-203ENST00000535804 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
NCAPD2-203ENST00000535804 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
NCAPD2-203ENST00000535804 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
NCAPD2-203ENST00000535804 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
NCAPD2-203ENST00000535804 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
NCAPD2-203ENST00000535804 NUP160Q12769 1436 aa23.04■■□□□ 1.28
NCAPD2-203ENST00000535804 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
NCAPD2-203ENST00000535804 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
NCAPD2-203ENST00000535804 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
NCAPD2-203ENST00000535804 IGF1RP08069 1367 aa22.92■■□□□ 1.26
NCAPD2-203ENST00000535804 CUL7Q14999 1698 aa22.92■■□□□ 1.26
NCAPD2-203ENST00000535804 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
NCAPD2-203ENST00000535804 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms