RNA–Protein interactions for RNA: ENST00000040663.7

MRI1-201, Transcript of methylthioribose-1-phosphate isomerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRI1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRI1-201ENST00000040663 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
MRI1-201ENST00000040663 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
MRI1-201ENST00000040663 ZCCHC6Q5VYS8 1495 aaKnown RBP34.04■■■■□ 3.04
MRI1-201ENST00000040663 ABCC9O60706 1549 aa33.68■■■□□ 2.98
MRI1-201ENST00000040663 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
MRI1-201ENST00000040663 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
MRI1-201ENST00000040663 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
MRI1-201ENST00000040663 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
MRI1-201ENST00000040663 NACADO15069 1562 aa32.78■■■□□ 2.84
MRI1-201ENST00000040663 RB1CC1Q8TDY2 1594 aa32.45■■■□□ 2.79
MRI1-201ENST00000040663 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
MRI1-201ENST00000040663 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
MRI1-201ENST00000040663 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
MRI1-201ENST00000040663 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
MRI1-201ENST00000040663 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
MRI1-201ENST00000040663 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
MRI1-201ENST00000040663 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.61
MRI1-201ENST00000040663 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
MRI1-201ENST00000040663 BAZ1AQ9NRL2 1556 aaPredicted RBP31.25■■■□□ 2.59
MRI1-201ENST00000040663 DNAJC5BQ9UF47 199 aa31.24■■■□□ 2.59
MRI1-201ENST00000040663 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
MRI1-201ENST00000040663 WIZO95785 1651 aa31.03■■■□□ 2.56
MRI1-201ENST00000040663 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
MRI1-201ENST00000040663 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
MRI1-201ENST00000040663 PEG3Q9GZU2 1588 aa30.7■■■□□ 2.51
MRI1-201ENST00000040663 ATAD2BQ9ULI0 1458 aa30.55■■■□□ 2.48
MRI1-201ENST00000040663 SMARCA2P51531 1590 aa30.53■■■□□ 2.48
MRI1-201ENST00000040663 EIF4G1Q04637 1599 aaKnown RBP30.51■■■□□ 2.47
MRI1-201ENST00000040663 CC2D2AQ9P2K1 1620 aa30.48■■■□□ 2.47
MRI1-201ENST00000040663 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
MRI1-201ENST00000040663 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
MRI1-201ENST00000040663 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
MRI1-201ENST00000040663 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
MRI1-201ENST00000040663 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
MRI1-201ENST00000040663 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
MRI1-201ENST00000040663 WRNQ14191 1432 aaPredicted RBP eCLIP29.63■■■□□ 2.33
MRI1-201ENST00000040663 CFTRP13569 1480 aa29.63■■■□□ 2.33
MRI1-201ENST00000040663 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
MRI1-201ENST00000040663 FAM9AQ8IZU1 332 aaPredicted RBP29.53■■■□□ 2.32
MRI1-201ENST00000040663 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
MRI1-201ENST00000040663 SYNJ1O43426 1573 aa29.49■■■□□ 2.31
MRI1-201ENST00000040663 PRDM2Q13029 1718 aa29.45■■■□□ 2.3
MRI1-201ENST00000040663 TOP2BQ02880 1626 aa29.36■■■□□ 2.29
MRI1-201ENST00000040663 BIVM-ERCC5R4GMW8 1640 aa29.32■■■□□ 2.28
MRI1-201ENST00000040663 SOGA1O94964 1423 aa29.31■■■□□ 2.28
MRI1-201ENST00000040663 EEA1Q15075 1411 aa29.3■■■□□ 2.28
MRI1-201ENST00000040663 CUX1P39880 1505 aa29.25■■■□□ 2.27
MRI1-201ENST00000040663 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.26
MRI1-201ENST00000040663 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
MRI1-201ENST00000040663 NESP48681 1621 aa29.18■■■□□ 2.26
MRI1-201ENST00000040663 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
MRI1-201ENST00000040663 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
MRI1-201ENST00000040663 EHMT2Q96KQ7 1210 aa29.09■■■□□ 2.25
MRI1-201ENST00000040663 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
MRI1-201ENST00000040663 PDS5BQ9NTI5 1447 aa28.99■■■□□ 2.23
MRI1-201ENST00000040663 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
MRI1-201ENST00000040663 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
MRI1-201ENST00000040663 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
MRI1-201ENST00000040663 GOLGA3Q08378 1498 aa28.9■■■□□ 2.22
MRI1-201ENST00000040663 KIF21BO75037 1637 aa28.89■■■□□ 2.22
MRI1-201ENST00000040663 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
MRI1-201ENST00000040663 TOPBP1Q92547 1522 aa28.87■■■□□ 2.21
MRI1-201ENST00000040663 TNIKQ9UKE5 1360 aa28.85■■■□□ 2.21
MRI1-201ENST00000040663 CUX2O14529 1486 aa28.83■■■□□ 2.21
MRI1-201ENST00000040663 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
MRI1-201ENST00000040663 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
MRI1-201ENST00000040663 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
MRI1-201ENST00000040663 POLA1P09884 1462 aaPredicted RBP28.74■■■□□ 2.19
MRI1-201ENST00000040663 THOC2Q8NI27 1593 aaKnown RBP28.73■■■□□ 2.19
MRI1-201ENST00000040663 PRXQ9BXM0 1461 aa28.71■■■□□ 2.19
MRI1-201ENST00000040663 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
MRI1-201ENST00000040663 CEP162Q5TB80 1403 aa28.7■■■□□ 2.18
MRI1-201ENST00000040663 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
MRI1-201ENST00000040663 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
MRI1-201ENST00000040663 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
MRI1-201ENST00000040663 IGF1RP08069 1367 aa28.61■■■□□ 2.17
MRI1-201ENST00000040663 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
MRI1-201ENST00000040663 WDR97A6NE52 1622 aa28.52■■■□□ 2.16
MRI1-201ENST00000040663 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
MRI1-201ENST00000040663 CLIP1P30622 1438 aa28.44■■■□□ 2.14
MRI1-201ENST00000040663 WDR62O43379 1518 aa28.42■■■□□ 2.14
MRI1-201ENST00000040663 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
MRI1-201ENST00000040663 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.14
MRI1-201ENST00000040663 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
MRI1-201ENST00000040663 DNAJC5Q9H3Z4 198 aa28.37■■■□□ 2.13
MRI1-201ENST00000040663 PCGF6Q9BYE7 350 aa28.36■■■□□ 2.13
MRI1-201ENST00000040663 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
MRI1-201ENST00000040663 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
MRI1-201ENST00000040663 CUL7Q14999 1698 aa28.34■■■□□ 2.13
MRI1-201ENST00000040663 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
MRI1-201ENST00000040663 RANGAP1P46060 587 aaPredicted RBP28.25■■■□□ 2.11
MRI1-201ENST00000040663 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
MRI1-201ENST00000040663 AQRO60306 1485 aaKnown RBP eCLIP28.16■■■□□ 2.17e-7■■■■■ 31.3
MRI1-201ENST00000040663 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
MRI1-201ENST00000040663 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
MRI1-201ENST00000040663 ARAP1Q96P48 1450 aa28.14■■■□□ 2.09
MRI1-201ENST00000040663 GRIN2BQ13224 1484 aa28.11■■■□□ 2.09
MRI1-201ENST00000040663 ARHGAP35Q9NRY4 1499 aa28.1■■■□□ 2.09
MRI1-201ENST00000040663 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
MRI1-201ENST00000040663 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms