Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.638e-7■□□□□ 10.1
LARP4Q71RC2 SRSF9-202ENST00000546942 946 ntTSL 1 (best)24.11■■□□□ 1.451e-7■□□□□ 10.1
LARP4Q71RC2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.49□□□□□ -0.252e-33■□□□□ 10.1
LARP4Q71RC2 ADH5-210ENST00000512621 1475 ntTSL 212.02□□□□□ -0.492e-33■□□□□ 10.1
LARP4Q71RC2 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.022e-33■□□□□ 10.1
LARP4Q71RC2 IRAK1-201ENST00000369973 2358 ntTSL 524.53■■□□□ 1.528e-8■□□□□ 10
LARP4Q71RC2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.29■■□□□ 1.488e-8■□□□□ 10
LARP4Q71RC2 CBX3-204ENST00000456948 1068 ntTSL 521.25■□□□□ 0.998e-8■□□□□ 10
LARP4Q71RC2 IRAK1-210ENST00000455690 784 ntTSL 318.49■□□□□ 0.558e-8■□□□□ 10
LARP4Q71RC2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.31■□□□□ 0.28e-8■□□□□ 10
LARP4Q71RC2 SNRNP35-204ENST00000527158 2161 ntTSL 1 (best)15.91■□□□□ 0.148e-8■□□□□ 10
LARP4Q71RC2 IRAK1-208ENST00000444230 1125 ntTSL 515.74■□□□□ 0.118e-8■□□□□ 10
LARP4Q71RC2 IRAK1-209ENST00000444254 783 ntTSL 515.38■□□□□ 0.058e-8■□□□□ 10
LARP4Q71RC2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.18e-8■□□□□ 10
LARP4Q71RC2 IRAK1-206ENST00000437278 862 ntTSL 512.84□□□□□ -0.358e-8■□□□□ 10
LARP4Q71RC2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.398e-8■□□□□ 10
LARP4Q71RC2 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.498e-8■□□□□ 10
LARP4Q71RC2 IRAK1-213ENST00000477274 705 ntTSL 511.91□□□□□ -0.58e-8■□□□□ 10
LARP4Q71RC2 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC11.86□□□□□ -0.518e-8■□□□□ 10
LARP4Q71RC2 SNRNP35-201ENST00000350887 942 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.618e-8■□□□□ 10
LARP4Q71RC2 SNRNP35-202ENST00000412157 1140 ntTSL 1 (best) BASIC11.27□□□□□ -0.618e-8■□□□□ 10
LARP4Q71RC2 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC10.84□□□□□ -0.678e-8■□□□□ 10
LARP4Q71RC2 SNRNP35-203ENST00000526639 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.778e-8■□□□□ 10
LARP4Q71RC2 CBX3-205ENST00000462165 949 ntTSL 39.75□□□□□ -0.858e-8■□□□□ 10
LARP4Q71RC2 LINC01287-202ENST00000453187 430 ntTSL 39.73□□□□□ -0.858e-8■□□□□ 10
LARP4Q71RC2 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC9.21□□□□□ -0.948e-8■□□□□ 10
LARP4Q71RC2 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC9.21□□□□□ -0.948e-8■□□□□ 10
LARP4Q71RC2 CSDE1-212ENST00000529046 571 ntTSL 46.35□□□□□ -1.398e-15■□□□□ 10
LARP4Q71RC2 TMEM56-RWDD3-201ENST00000604203 680 ntTSL 36.33□□□□□ -1.48e-8■□□□□ 10
LARP4Q71RC2 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)5.91□□□□□ -1.468e-8■□□□□ 10
LARP4Q71RC2 CBX3-208ENST00000497498 922 ntTSL 25.43□□□□□ -1.548e-8■□□□□ 10
LARP4Q71RC2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.558e-8■□□□□ 10
LARP4Q71RC2 CBX3-207ENST00000481300 559 ntTSL 25.01□□□□□ -1.618e-8■□□□□ 10
LARP4Q71RC2 CSDE1-209ENST00000525132 521 ntTSL 53.54□□□□□ -1.848e-15■□□□□ 10
LARP4Q71RC2 CSDE1-216ENST00000534389 601 ntTSL 43.38□□□□□ -1.878e-15■□□□□ 10
LARP4Q71RC2 PHB2-206ENST00000542294 639 ntTSL 218.72■□□□□ 0.591e-9■□□□□ 10
LARP4Q71RC2 PHB2-210ENST00000544888 872 ntTSL 317.51■□□□□ 0.391e-9■□□□□ 10
LARP4Q71RC2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.39■□□□□ 0.371e-9■□□□□ 10
LARP4Q71RC2 PHB2-209ENST00000544134 652 ntTSL 317.26■□□□□ 0.351e-9■□□□□ 10
LARP4Q71RC2 PHB2-211ENST00000545167 908 ntTSL 517.09■□□□□ 0.331e-9■□□□□ 10
LARP4Q71RC2 PHB2-214ENST00000546217 628 ntTSL 216.46■□□□□ 0.231e-9■□□□□ 10
LARP4Q71RC2 PHB2-204ENST00000536316 739 ntTSL 516.14■□□□□ 0.171e-9■□□□□ 10
LARP4Q71RC2 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC11.16□□□□□ -0.628e-7■□□□□ 10
LARP4Q71RC2 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.948e-7■□□□□ 10
LARP4Q71RC2 MT-RNR2-201ENST00000387347 1559 ntBASIC5.51□□□□□ -1.531e-323■□□□□ 10
LARP4Q71RC2 NEU4-207ENST00000420288 845 ntTSL 317.54■□□□□ 0.42e-6■□□□□ 10
LARP4Q71RC2 NEU4-206ENST00000415936 860 ntTSL 316.57■□□□□ 0.242e-6■□□□□ 10
LARP4Q71RC2 NEU4-208ENST00000423583 753 ntTSL 516.16■□□□□ 0.182e-6■□□□□ 10
LARP4Q71RC2 NEU4-209ENST00000426032 676 ntTSL 314.66□□□□□ -0.062e-6■□□□□ 10
LARP4Q71RC2 RPS15-213ENST00000617694 338 ntTSL 310.75□□□□□ -0.695e-30■□□□□ 10
LARP4Q71RC2 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.242e-6■□□□□ 10
LARP4Q71RC2 SRPRB-202ENST00000466636 917 ntTSL 39.3□□□□□ -0.922e-6■□□□□ 10
LARP4Q71RC2 SLC5A6-213ENST00000461757 2307 ntTSL 218.5■□□□□ 0.553e-7■□□□□ 10
LARP4Q71RC2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.134e-24■□□□□ 10
LARP4Q71RC2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.24e-24■□□□□ 10
LARP4Q71RC2 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.44e-24■□□□□ 10
LARP4Q71RC2 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.583e-7■□□□□ 10
LARP4Q71RC2 SLC5A6-217ENST00000488743 3174 ntTSL 211.4□□□□□ -0.593e-7■□□□□ 10
LARP4Q71RC2 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.964e-24■□□□□ 10
LARP4Q71RC2 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.184e-24■□□□□ 10
LARP4Q71RC2 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.194e-24■□□□□ 10
LARP4Q71RC2 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.344e-24■□□□□ 10
LARP4Q71RC2 TMBIM6-219ENST00000549471 484 ntTSL 24.96□□□□□ -1.624e-24■□□□□ 10
LARP4Q71RC2 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.983e-19■□□□□ 10
LARP4Q71RC2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.28■□□□□ 0.27e-18■□□□□ 10
LARP4Q71RC2 AGRN-203ENST00000461111 3385 ntTSL 1 (best)12.39□□□□□ -0.437e-18■□□□□ 10
LARP4Q71RC2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.58■■□□□ 1.375e-7■□□□□ 10
LARP4Q71RC2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.72■□□□□ 0.595e-7■□□□□ 10
LARP4Q71RC2 SHISA5-204ENST00000417962 2306 ntTSL 218.54■□□□□ 0.565e-7■□□□□ 10
LARP4Q71RC2 SHISA5-212ENST00000465449 1739 ntTSL 216.64■□□□□ 0.255e-7■□□□□ 10
LARP4Q71RC2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.25■□□□□ 0.195e-7■□□□□ 10
LARP4Q71RC2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.19■□□□□ 0.185e-7■□□□□ 10
LARP4Q71RC2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.53■□□□□ 0.085e-7■□□□□ 10
LARP4Q71RC2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.48■□□□□ 0.075e-7■□□□□ 10
LARP4Q71RC2 SHISA5-216ENST00000494854 1908 ntTSL 1 (best)15.39■□□□□ 0.055e-7■□□□□ 10
LARP4Q71RC2 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.255e-7■□□□□ 10
LARP4Q71RC2 SHISA5-213ENST00000466424 673 ntTSL 210.9□□□□□ -0.665e-7■□□□□ 10
LARP4Q71RC2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.343e-21■□□□□ 10
LARP4Q71RC2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.082e-31■□□□□ 10
LARP4Q71RC2 DHRS2-205ENST00000553896 1352 ntTSL 1 (best)18.93■□□□□ 0.629e-50■□□□□ 10
LARP4Q71RC2 OAZ1-206ENST00000589739 657 ntTSL 216.72■□□□□ 0.271e-13■□□□□ 10
LARP4Q71RC2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.312e-9■□□□□ 10
LARP4Q71RC2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.092e-9■□□□□ 10
LARP4Q71RC2 CLSTN1-205ENST00000477264 2169 ntTSL 215.24■□□□□ 0.032e-9■□□□□ 10
LARP4Q71RC2 CLSTN1-203ENST00000435891 3829 ntTSL 210.41□□□□□ -0.742e-9■□□□□ 10
LARP4Q71RC2 GUK1-234ENST00000492871 1065 ntTSL 323.6■■□□□ 1.371e-6■□□□□ 10
LARP4Q71RC2 GUK1-235ENST00000493138 694 ntTSL 322.75■■□□□ 1.231e-6■□□□□ 10
LARP4Q71RC2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.9■■□□□ 1.11e-6■□□□□ 10
LARP4Q71RC2 GUK1-220ENST00000471270 657 ntTSL 220.8■□□□□ 0.921e-6■□□□□ 10
LARP4Q71RC2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.87■□□□□ 0.771e-6■□□□□ 10
LARP4Q71RC2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.71e-6■□□□□ 10
LARP4Q71RC2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.531e-6■□□□□ 10
LARP4Q71RC2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.521e-6■□□□□ 10
LARP4Q71RC2 GUK1-230ENST00000485838 774 ntTSL 316.45■□□□□ 0.221e-6■□□□□ 10
LARP4Q71RC2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.111e-6■□□□□ 10
LARP4Q71RC2 GUK1-222ENST00000477206 589 ntTSL 215.71■□□□□ 0.111e-6■□□□□ 10
LARP4Q71RC2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.091e-6■□□□□ 10
LARP4Q71RC2 GUK1-224ENST00000480056 544 ntTSL 315.32■□□□□ 0.041e-6■□□□□ 10
LARP4Q71RC2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.011e-6■□□□□ 10
LARP4Q71RC2 GUK1-219ENST00000470040 2548 ntTSL 214.99□□□□□ -0.011e-6■□□□□ 10
Retrieved 100 of 15,922 protein–RNA pairs in 404.3 ms