RNA–Protein interactions for RNA: ENST00000604203.1

TMEM56-RWDD3-201, Transcript of TMEM56-RWDD3 readthrough, humanhuman

TSL 3

Gene TMEM56-RWDD3, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3-201ENST00000604203 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
TMEM56-RWDD3-201ENST00000604203 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
TMEM56-RWDD3-201ENST00000604203 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
TMEM56-RWDD3-201ENST00000604203 PHF23Q9BUL5 403 aaPredicted RBP25.86■■□□□ 1.73
TMEM56-RWDD3-201ENST00000604203 FOXD1Q16676 465 aa24.42■■□□□ 1.5
TMEM56-RWDD3-201ENST00000604203 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
TMEM56-RWDD3-201ENST00000604203 MSH5O43196 834 aa22.9■■□□□ 1.26
TMEM56-RWDD3-201ENST00000604203 PIAS4Q8N2W9 510 aaPredicted RBP22.88■■□□□ 1.25
TMEM56-RWDD3-201ENST00000604203 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
TMEM56-RWDD3-201ENST00000604203 ADRA2BP18089 450 aa22.76■■□□□ 1.23
TMEM56-RWDD3-201ENST00000604203 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
TMEM56-RWDD3-201ENST00000604203 MAPK8IP2Q13387 824 aaPredicted RBP20.91■□□□□ 0.94
TMEM56-RWDD3-201ENST00000604203 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
TMEM56-RWDD3-201ENST00000604203 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
TMEM56-RWDD3-201ENST00000604203 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
TMEM56-RWDD3-201ENST00000604203 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
TMEM56-RWDD3-201ENST00000604203 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
TMEM56-RWDD3-201ENST00000604203 HOXD11P31277 338 aaPredicted RBP19.96■□□□□ 0.79
TMEM56-RWDD3-201ENST00000604203 RNF216Q9NWF9 866 aaPredicted RBP19.83■□□□□ 0.77
TMEM56-RWDD3-201ENST00000604203 CACNB1Q02641 598 aaPredicted RBP19.72■□□□□ 0.75
TMEM56-RWDD3-201ENST00000604203 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
TMEM56-RWDD3-201ENST00000604203 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
TMEM56-RWDD3-201ENST00000604203 NPM3O75607 178 aaKnown RBP19.3■□□□□ 0.68
TMEM56-RWDD3-201ENST00000604203 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
TMEM56-RWDD3-201ENST00000604203 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
TMEM56-RWDD3-201ENST00000604203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.65
TMEM56-RWDD3-201ENST00000604203 KCNA4P22459 653 aa18.92■□□□□ 0.62
TMEM56-RWDD3-201ENST00000604203 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
TMEM56-RWDD3-201ENST00000604203 CAPN15O75808 1086 aa18.44■□□□□ 0.54
TMEM56-RWDD3-201ENST00000604203 SLC4A2P04920 1241 aa18.43■□□□□ 0.54
TMEM56-RWDD3-201ENST00000604203 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
TMEM56-RWDD3-201ENST00000604203 DSG3P32926 999 aa18.26■□□□□ 0.51
TMEM56-RWDD3-201ENST00000604203 APLP2Q06481 763 aa18.18■□□□□ 0.5
TMEM56-RWDD3-201ENST00000604203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
TMEM56-RWDD3-201ENST00000604203 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
TMEM56-RWDD3-201ENST00000604203 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.49
TMEM56-RWDD3-201ENST00000604203 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
TMEM56-RWDD3-201ENST00000604203 SAMD1Q6SPF0 538 aaPredicted RBP18.04■□□□□ 0.48
TMEM56-RWDD3-201ENST00000604203 ABCB7O75027 752 aa18.02■□□□□ 0.48
TMEM56-RWDD3-201ENST00000604203 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
TMEM56-RWDD3-201ENST00000604203 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
TMEM56-RWDD3-201ENST00000604203 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
TMEM56-RWDD3-201ENST00000604203 POLA2Q14181 598 aa17.6■□□□□ 0.41
TMEM56-RWDD3-201ENST00000604203 POTEHQ6S545 545 aa17.56■□□□□ 0.4
TMEM56-RWDD3-201ENST00000604203 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
TMEM56-RWDD3-201ENST00000604203 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
TMEM56-RWDD3-201ENST00000604203 ZBTB22O15209 634 aa17.38■□□□□ 0.37
TMEM56-RWDD3-201ENST00000604203 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
TMEM56-RWDD3-201ENST00000604203 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
TMEM56-RWDD3-201ENST00000604203 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
TMEM56-RWDD3-201ENST00000604203 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
TMEM56-RWDD3-201ENST00000604203 AKT1S1Q96B36 256 aa17.03■□□□□ 0.32
TMEM56-RWDD3-201ENST00000604203 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
TMEM56-RWDD3-201ENST00000604203 FBLN2P98095 1184 aa16.83■□□□□ 0.28
TMEM56-RWDD3-201ENST00000604203 PITPNM1O00562 1244 aa16.72■□□□□ 0.27
TMEM56-RWDD3-201ENST00000604203 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
TMEM56-RWDD3-201ENST00000604203 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
TMEM56-RWDD3-201ENST00000604203 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
TMEM56-RWDD3-201ENST00000604203 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
TMEM56-RWDD3-201ENST00000604203 MKRN4PQ13434 485 aaPredicted RBP16.63■□□□□ 0.25
TMEM56-RWDD3-201ENST00000604203 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
TMEM56-RWDD3-201ENST00000604203 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.24
TMEM56-RWDD3-201ENST00000604203 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
TMEM56-RWDD3-201ENST00000604203 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
TMEM56-RWDD3-201ENST00000604203 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
TMEM56-RWDD3-201ENST00000604203 SSUH2Q9Y2M2 353 aa16.44■□□□□ 0.22
TMEM56-RWDD3-201ENST00000604203 HAX1O00165 279 aa16.43■□□□□ 0.22
TMEM56-RWDD3-201ENST00000604203 SPDYE1Q8NFV5 336 aaPredicted RBP16.43■□□□□ 0.22
TMEM56-RWDD3-201ENST00000604203 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
TMEM56-RWDD3-201ENST00000604203 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
TMEM56-RWDD3-201ENST00000604203 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
TMEM56-RWDD3-201ENST00000604203 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
TMEM56-RWDD3-201ENST00000604203 EVX2Q03828 476 aa16.14■□□□□ 0.17
TMEM56-RWDD3-201ENST00000604203 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
TMEM56-RWDD3-201ENST00000604203 C19orf67A6NJJ6 358 aa16.01■□□□□ 0.15
TMEM56-RWDD3-201ENST00000604203 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
TMEM56-RWDD3-201ENST00000604203 FARP1Q9Y4F1 1045 aaPredicted RBP15.85■□□□□ 0.13
TMEM56-RWDD3-201ENST00000604203 GABBR2O75899 941 aa15.8■□□□□ 0.12
TMEM56-RWDD3-201ENST00000604203 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
TMEM56-RWDD3-201ENST00000604203 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
TMEM56-RWDD3-201ENST00000604203 CREBZFQ9NS37 354 aa15.69■□□□□ 0.1
TMEM56-RWDD3-201ENST00000604203 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
TMEM56-RWDD3-201ENST00000604203 CLCN6P51797 869 aa15.5■□□□□ 0.07
TMEM56-RWDD3-201ENST00000604203 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
TMEM56-RWDD3-201ENST00000604203 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
TMEM56-RWDD3-201ENST00000604203 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
TMEM56-RWDD3-201ENST00000604203 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
TMEM56-RWDD3-201ENST00000604203 LHX8Q68G74 356 aa15.43■□□□□ 0.06
TMEM56-RWDD3-201ENST00000604203 DCBLD2Q96PD2 775 aa15.43■□□□□ 0.06
TMEM56-RWDD3-201ENST00000604203 PROM2Q8N271 834 aa15.4■□□□□ 0.06
TMEM56-RWDD3-201ENST00000604203 MNX1P50219 401 aaPredicted RBP15.37■□□□□ 0.05
TMEM56-RWDD3-201ENST00000604203 PHF12Q96QT6 1004 aa15.35■□□□□ 0.05
TMEM56-RWDD3-201ENST00000604203 GALR2O43603 387 aaPredicted RBP15.33■□□□□ 0.04
TMEM56-RWDD3-201ENST00000604203 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
TMEM56-RWDD3-201ENST00000604203 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
TMEM56-RWDD3-201ENST00000604203 MIER1Q8N108 512 aa15.17■□□□□ 0.02
TMEM56-RWDD3-201ENST00000604203 MS4A3Q96HJ5 214 aa15.13■□□□□ 0.01
TMEM56-RWDD3-201ENST00000604203 PLCD3Q8N3E9 789 aa15.08■□□□□ 0
TMEM56-RWDD3-201ENST00000604203 FKBP8Q14318 412 aa15.07■□□□□ 0
TMEM56-RWDD3-201ENST00000604203 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms