RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
SNRNP35-202ENST00000412157 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
SNRNP35-202ENST00000412157 ABCC9O60706 1549 aa22.88■■□□□ 1.25
SNRNP35-202ENST00000412157 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
SNRNP35-202ENST00000412157 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
SNRNP35-202ENST00000412157 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
SNRNP35-202ENST00000412157 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
SNRNP35-202ENST00000412157 NACADO15069 1562 aa21.7■■□□□ 1.06
SNRNP35-202ENST00000412157 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
SNRNP35-202ENST00000412157 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
SNRNP35-202ENST00000412157 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
SNRNP35-202ENST00000412157 SCRIBQ14160 1630 aa21.38■■□□□ 1.01
SNRNP35-202ENST00000412157 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNRNP35-202ENST00000412157 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
SNRNP35-202ENST00000412157 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
SNRNP35-202ENST00000412157 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
SNRNP35-202ENST00000412157 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
SNRNP35-202ENST00000412157 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
SNRNP35-202ENST00000412157 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
SNRNP35-202ENST00000412157 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
SNRNP35-202ENST00000412157 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
SNRNP35-202ENST00000412157 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
SNRNP35-202ENST00000412157 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
SNRNP35-202ENST00000412157 WIZO95785 1651 aa20.38■□□□□ 0.85
SNRNP35-202ENST00000412157 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
SNRNP35-202ENST00000412157 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
SNRNP35-202ENST00000412157 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
SNRNP35-202ENST00000412157 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
SNRNP35-202ENST00000412157 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
SNRNP35-202ENST00000412157 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
SNRNP35-202ENST00000412157 HMGXB3Q12766 1538 aa20■□□□□ 0.79
SNRNP35-202ENST00000412157 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
SNRNP35-202ENST00000412157 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
SNRNP35-202ENST00000412157 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
SNRNP35-202ENST00000412157 CUX2O14529 1486 aa19.79■□□□□ 0.76
SNRNP35-202ENST00000412157 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
SNRNP35-202ENST00000412157 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
SNRNP35-202ENST00000412157 NESP48681 1621 aa19.56■□□□□ 0.72
SNRNP35-202ENST00000412157 CFTRP13569 1480 aa19.48■□□□□ 0.71
SNRNP35-202ENST00000412157 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
SNRNP35-202ENST00000412157 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
SNRNP35-202ENST00000412157 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
SNRNP35-202ENST00000412157 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
SNRNP35-202ENST00000412157 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
SNRNP35-202ENST00000412157 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
SNRNP35-202ENST00000412157 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
SNRNP35-202ENST00000412157 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
SNRNP35-202ENST00000412157 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
SNRNP35-202ENST00000412157 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
SNRNP35-202ENST00000412157 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
SNRNP35-202ENST00000412157 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
SNRNP35-202ENST00000412157 CUX1P39880 1505 aa19.19■□□□□ 0.66
SNRNP35-202ENST00000412157 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
SNRNP35-202ENST00000412157 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
SNRNP35-202ENST00000412157 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
SNRNP35-202ENST00000412157 WDR62O43379 1518 aa19.08■□□□□ 0.64
SNRNP35-202ENST00000412157 EEA1Q15075 1411 aa19.08■□□□□ 0.64
SNRNP35-202ENST00000412157 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
SNRNP35-202ENST00000412157 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
SNRNP35-202ENST00000412157 SOGA1O94964 1423 aa19.01■□□□□ 0.63
SNRNP35-202ENST00000412157 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
SNRNP35-202ENST00000412157 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
SNRNP35-202ENST00000412157 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
SNRNP35-202ENST00000412157 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
SNRNP35-202ENST00000412157 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
SNRNP35-202ENST00000412157 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
SNRNP35-202ENST00000412157 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
SNRNP35-202ENST00000412157 KIF21BO75037 1637 aa18.87■□□□□ 0.61
SNRNP35-202ENST00000412157 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
SNRNP35-202ENST00000412157 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
SNRNP35-202ENST00000412157 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
SNRNP35-202ENST00000412157 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
SNRNP35-202ENST00000412157 GOLGA3Q08378 1498 aa18.8■□□□□ 0.6
SNRNP35-202ENST00000412157 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
SNRNP35-202ENST00000412157 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
SNRNP35-202ENST00000412157 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
SNRNP35-202ENST00000412157 ABCA5Q8WWZ7 1642 aa18.74■□□□□ 0.59
SNRNP35-202ENST00000412157 CUL7Q14999 1698 aa18.71■□□□□ 0.59
SNRNP35-202ENST00000412157 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
SNRNP35-202ENST00000412157 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
SNRNP35-202ENST00000412157 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
SNRNP35-202ENST00000412157 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
SNRNP35-202ENST00000412157 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
SNRNP35-202ENST00000412157 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
SNRNP35-202ENST00000412157 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
SNRNP35-202ENST00000412157 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
SNRNP35-202ENST00000412157 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
SNRNP35-202ENST00000412157 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
SNRNP35-202ENST00000412157 IGF1RP08069 1367 aa18.64■□□□□ 0.57
SNRNP35-202ENST00000412157 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
SNRNP35-202ENST00000412157 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
SNRNP35-202ENST00000412157 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
SNRNP35-202ENST00000412157 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
SNRNP35-202ENST00000412157 ARHGEF11O15085 1522 aa18.57■□□□□ 0.56
SNRNP35-202ENST00000412157 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
SNRNP35-202ENST00000412157 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
SNRNP35-202ENST00000412157 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
SNRNP35-202ENST00000412157 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.56
SNRNP35-202ENST00000412157 ADAMTS12P58397 1594 aa18.52■□□□□ 0.56
SNRNP35-202ENST00000412157 CHD1O14646 1710 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms