RNA–Protein interactions for RNA: ENST00000465449.5

SHISA5-212, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 1,739 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-212ENST00000465449 NISCHQ9Y2I1 1504 aa43.37■■■■■ 4.53
SHISA5-212ENST00000465449 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
SHISA5-212ENST00000465449 ABCC9O60706 1549 aa37.59■■■■□ 3.61
SHISA5-212ENST00000465449 DCAF8L2P0C7V8 631 aa36.29■■■■□ 3.4
SHISA5-212ENST00000465449 ZCCHC6Q5VYS8 1495 aaKnown RBP36.16■■■■□ 3.38
SHISA5-212ENST00000465449 RB1CC1Q8TDY2 1594 aa36.09■■■■□ 3.37
SHISA5-212ENST00000465449 NACADO15069 1562 aa36.07■■■■□ 3.37
SHISA5-212ENST00000465449 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
SHISA5-212ENST00000465449 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
SHISA5-212ENST00000465449 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
SHISA5-212ENST00000465449 PABPN1Q86U42 306 aaKnown RBP eCLIP35.21■■■■□ 3.23
SHISA5-212ENST00000465449 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
SHISA5-212ENST00000465449 BICRAQ9NZM4 1560 aa35.09■■■■□ 3.21
SHISA5-212ENST00000465449 SHROOM4Q9ULL8 1493 aa34.53■■■■□ 3.12
SHISA5-212ENST00000465449 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
SHISA5-212ENST00000465449 EIF4G1Q04637 1599 aaKnown RBP34.12■■■■□ 3.05
SHISA5-212ENST00000465449 CC2D2AQ9P2K1 1620 aa33.96■■■■□ 3.03
SHISA5-212ENST00000465449 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
SHISA5-212ENST00000465449 SMARCA4P51532 1647 aa33.62■■■□□ 2.97
SHISA5-212ENST00000465449 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
SHISA5-212ENST00000465449 MROH2BQ7Z745 1585 aa33.5■■■□□ 2.95
SHISA5-212ENST00000465449 ATAD2BQ9ULI0 1458 aa33.42■■■□□ 2.94
SHISA5-212ENST00000465449 NCAPD3P42695 1498 aa33.32■■■□□ 2.92
SHISA5-212ENST00000465449 SMARCA2P51531 1590 aa33.3■■■□□ 2.92
SHISA5-212ENST00000465449 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
SHISA5-212ENST00000465449 RSF1Q96T23 1441 aaPredicted RBP33.15■■■□□ 2.9
SHISA5-212ENST00000465449 WIZO95785 1651 aa33.15■■■□□ 2.9
SHISA5-212ENST00000465449 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
SHISA5-212ENST00000465449 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
SHISA5-212ENST00000465449 TOP2AP11388 1531 aaKnown RBP32.73■■■□□ 2.83
SHISA5-212ENST00000465449 NESP48681 1621 aa32.61■■■□□ 2.81
SHISA5-212ENST00000465449 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
SHISA5-212ENST00000465449 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
SHISA5-212ENST00000465449 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
SHISA5-212ENST00000465449 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
SHISA5-212ENST00000465449 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
SHISA5-212ENST00000465449 CFTRP13569 1480 aa32.23■■■□□ 2.75
SHISA5-212ENST00000465449 PDS5BQ9NTI5 1447 aa32.17■■■□□ 2.74
SHISA5-212ENST00000465449 KIF21AQ7Z4S6 1674 aa32.16■■■□□ 2.74
SHISA5-212ENST00000465449 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
SHISA5-212ENST00000465449 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
SHISA5-212ENST00000465449 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.71
SHISA5-212ENST00000465449 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
SHISA5-212ENST00000465449 MRC2Q9UBG0 1479 aa31.87■■■□□ 2.69
SHISA5-212ENST00000465449 CUX2O14529 1486 aa31.84■■■□□ 2.69
SHISA5-212ENST00000465449 WDR62O43379 1518 aa31.76■■■□□ 2.67
SHISA5-212ENST00000465449 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
SHISA5-212ENST00000465449 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
SHISA5-212ENST00000465449 DNMBPQ6XZF7 1577 aa31.48■■■□□ 2.63
SHISA5-212ENST00000465449 ABCC8Q09428 1581 aa31.42■■■□□ 2.62
SHISA5-212ENST00000465449 CUX1P39880 1505 aa31.4■■■□□ 2.62
SHISA5-212ENST00000465449 POLA1P09884 1462 aaPredicted RBP31.3■■■□□ 2.6
SHISA5-212ENST00000465449 FGD5Q6ZNL6 1462 aa31.26■■■□□ 2.59
SHISA5-212ENST00000465449 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
SHISA5-212ENST00000465449 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
SHISA5-212ENST00000465449 WRNQ14191 1432 aaPredicted RBP eCLIP31.22■■■□□ 2.59
SHISA5-212ENST00000465449 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
SHISA5-212ENST00000465449 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
SHISA5-212ENST00000465449 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
SHISA5-212ENST00000465449 SOGA1O94964 1423 aa31.16■■■□□ 2.58
SHISA5-212ENST00000465449 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
SHISA5-212ENST00000465449 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
SHISA5-212ENST00000465449 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.56
SHISA5-212ENST00000465449 EIF4G3O43432 1585 aaKnown RBP31.04■■■□□ 2.56
SHISA5-212ENST00000465449 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
SHISA5-212ENST00000465449 WDR97A6NE52 1622 aa30.95■■■□□ 2.54
SHISA5-212ENST00000465449 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
SHISA5-212ENST00000465449 GAPVD1Q14C86 1478 aa30.8■■■□□ 2.52
SHISA5-212ENST00000465449 ABCA5Q8WWZ7 1642 aa30.79■■■□□ 2.52
SHISA5-212ENST00000465449 DNAJC5Q9H3Z4 198 aa30.76■■■□□ 2.52
SHISA5-212ENST00000465449 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
SHISA5-212ENST00000465449 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
SHISA5-212ENST00000465449 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
SHISA5-212ENST00000465449 FBLN2P98095 1184 aa30.65■■■□□ 2.5
SHISA5-212ENST00000465449 MAGI1Q96QZ7 1491 aaPredicted RBP30.62■■■□□ 2.49
SHISA5-212ENST00000465449 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
SHISA5-212ENST00000465449 CHD1O14646 1710 aa30.62■■■□□ 2.49
SHISA5-212ENST00000465449 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
SHISA5-212ENST00000465449 CHMP7Q8WUX9 453 aaPredicted RBP30.53■■■□□ 2.48
SHISA5-212ENST00000465449 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
SHISA5-212ENST00000465449 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
SHISA5-212ENST00000465449 ERICH3Q5RHP9 1530 aa30.51■■■□□ 2.48
SHISA5-212ENST00000465449 ADAMTS12P58397 1594 aa30.49■■■□□ 2.47
SHISA5-212ENST00000465449 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
SHISA5-212ENST00000465449 IGF1RP08069 1367 aa30.44■■■□□ 2.46
SHISA5-212ENST00000465449 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
SHISA5-212ENST00000465449 CHIC1Q5VXU3 224 aa30.41■■■□□ 2.46
SHISA5-212ENST00000465449 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
SHISA5-212ENST00000465449 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
SHISA5-212ENST00000465449 CEP170Q5SW79 1584 aa30.26■■■□□ 2.43
SHISA5-212ENST00000465449 CUL7Q14999 1698 aa30.26■■■□□ 2.43
SHISA5-212ENST00000465449 CARMIL1Q5VZK9 1371 aa30.25■■■□□ 2.43
SHISA5-212ENST00000465449 NUP160Q12769 1436 aa30.22■■■□□ 2.43
SHISA5-212ENST00000465449 ARHGEF11O15085 1522 aa30.15■■■□□ 2.42
SHISA5-212ENST00000465449 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.42
SHISA5-212ENST00000465449 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.42
SHISA5-212ENST00000465449 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.42
SHISA5-212ENST00000465449 FAM9AQ8IZU1 332 aaPredicted RBP30.1■■■□□ 2.41
SHISA5-212ENST00000465449 RAPGEF2Q9Y4G8 1499 aa30.05■■■□□ 2.4
SHISA5-212ENST00000465449 CSRNP3Q8WYN3 585 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms