RNA–Protein interactions for RNA: ENST00000453187.1

LINC01287-202, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 3

Gene LINC01287, Length 430 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-202ENST00000453187 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
LINC01287-202ENST00000453187 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
LINC01287-202ENST00000453187 ABCC9O60706 1549 aa23.14■■□□□ 1.3
LINC01287-202ENST00000453187 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
LINC01287-202ENST00000453187 NACADO15069 1562 aa22.04■■□□□ 1.12
LINC01287-202ENST00000453187 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
LINC01287-202ENST00000453187 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
LINC01287-202ENST00000453187 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
LINC01287-202ENST00000453187 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
LINC01287-202ENST00000453187 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
LINC01287-202ENST00000453187 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
LINC01287-202ENST00000453187 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
LINC01287-202ENST00000453187 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
LINC01287-202ENST00000453187 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
LINC01287-202ENST00000453187 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
LINC01287-202ENST00000453187 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
LINC01287-202ENST00000453187 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
LINC01287-202ENST00000453187 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
LINC01287-202ENST00000453187 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
LINC01287-202ENST00000453187 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
LINC01287-202ENST00000453187 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
LINC01287-202ENST00000453187 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
LINC01287-202ENST00000453187 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
LINC01287-202ENST00000453187 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
LINC01287-202ENST00000453187 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
LINC01287-202ENST00000453187 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
LINC01287-202ENST00000453187 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
LINC01287-202ENST00000453187 WIZO95785 1651 aa20.1■□□□□ 0.81
LINC01287-202ENST00000453187 NESP48681 1621 aa19.98■□□□□ 0.79
LINC01287-202ENST00000453187 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
LINC01287-202ENST00000453187 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
LINC01287-202ENST00000453187 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
LINC01287-202ENST00000453187 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
LINC01287-202ENST00000453187 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
LINC01287-202ENST00000453187 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
LINC01287-202ENST00000453187 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
LINC01287-202ENST00000453187 CUX2O14529 1486 aa19.75■□□□□ 0.75
LINC01287-202ENST00000453187 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
LINC01287-202ENST00000453187 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
LINC01287-202ENST00000453187 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
LINC01287-202ENST00000453187 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
LINC01287-202ENST00000453187 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
LINC01287-202ENST00000453187 CFTRP13569 1480 aa19.54■□□□□ 0.72
LINC01287-202ENST00000453187 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
LINC01287-202ENST00000453187 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
LINC01287-202ENST00000453187 WDR62O43379 1518 aa19.51■□□□□ 0.71
LINC01287-202ENST00000453187 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
LINC01287-202ENST00000453187 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
LINC01287-202ENST00000453187 DNAJC5Q9H3Z4 198 aa19.22■□□□□ 0.67
LINC01287-202ENST00000453187 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
LINC01287-202ENST00000453187 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
LINC01287-202ENST00000453187 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
LINC01287-202ENST00000453187 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
LINC01287-202ENST00000453187 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
LINC01287-202ENST00000453187 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.64
LINC01287-202ENST00000453187 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
LINC01287-202ENST00000453187 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
LINC01287-202ENST00000453187 CUX1P39880 1505 aa19.02■□□□□ 0.64
LINC01287-202ENST00000453187 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
LINC01287-202ENST00000453187 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
LINC01287-202ENST00000453187 WDR97A6NE52 1622 aa18.93■□□□□ 0.62
LINC01287-202ENST00000453187 CHD1O14646 1710 aa18.92■□□□□ 0.62
LINC01287-202ENST00000453187 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.625e-12■■□□□ 14.1
LINC01287-202ENST00000453187 SOGA1O94964 1423 aa18.89■□□□□ 0.61
LINC01287-202ENST00000453187 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
LINC01287-202ENST00000453187 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
LINC01287-202ENST00000453187 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
LINC01287-202ENST00000453187 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
LINC01287-202ENST00000453187 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
LINC01287-202ENST00000453187 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
LINC01287-202ENST00000453187 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
LINC01287-202ENST00000453187 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
LINC01287-202ENST00000453187 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
LINC01287-202ENST00000453187 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
LINC01287-202ENST00000453187 GRIN2BQ13224 1484 aa18.72■□□□□ 0.59
LINC01287-202ENST00000453187 RIMBP3CA6NJZ7 1639 aa18.72■□□□□ 0.59
LINC01287-202ENST00000453187 RIMBP3BA6NNM3 1639 aa18.72■□□□□ 0.59
LINC01287-202ENST00000453187 RIMBP3Q9UFD9 1639 aa18.72■□□□□ 0.59
LINC01287-202ENST00000453187 FBLN2P98095 1184 aa18.72■□□□□ 0.59
LINC01287-202ENST00000453187 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
LINC01287-202ENST00000453187 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
LINC01287-202ENST00000453187 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
LINC01287-202ENST00000453187 ARHGEF11O15085 1522 aa18.65■□□□□ 0.58
LINC01287-202ENST00000453187 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
LINC01287-202ENST00000453187 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
LINC01287-202ENST00000453187 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
LINC01287-202ENST00000453187 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
LINC01287-202ENST00000453187 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
LINC01287-202ENST00000453187 GRIN2AQ12879 1464 aa18.52■□□□□ 0.55
LINC01287-202ENST00000453187 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
LINC01287-202ENST00000453187 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
LINC01287-202ENST00000453187 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
LINC01287-202ENST00000453187 CUL7Q14999 1698 aa18.41■□□□□ 0.54
LINC01287-202ENST00000453187 NUP160Q12769 1436 aa18.4■□□□□ 0.54
LINC01287-202ENST00000453187 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
LINC01287-202ENST00000453187 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
LINC01287-202ENST00000453187 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
LINC01287-202ENST00000453187 ERCC6L2Q5T890 1561 aa18.37■□□□□ 0.53
LINC01287-202ENST00000453187 SHROOM2Q13796 1616 aa18.34■□□□□ 0.53
LINC01287-202ENST00000453187 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms