RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
SRPRB-202ENST00000466636 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
SRPRB-202ENST00000466636 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
SRPRB-202ENST00000466636 CCDC180Q9P1Z9 1646 aa18.94■□□□□ 0.62
SRPRB-202ENST00000466636 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
SRPRB-202ENST00000466636 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.47
SRPRB-202ENST00000466636 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
SRPRB-202ENST00000466636 ABCC9O60706 1549 aa17.95■□□□□ 0.46
SRPRB-202ENST00000466636 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
SRPRB-202ENST00000466636 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
SRPRB-202ENST00000466636 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
SRPRB-202ENST00000466636 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
SRPRB-202ENST00000466636 NACADO15069 1562 aa17.67■□□□□ 0.42
SRPRB-202ENST00000466636 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
SRPRB-202ENST00000466636 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
SRPRB-202ENST00000466636 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
SRPRB-202ENST00000466636 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
SRPRB-202ENST00000466636 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
SRPRB-202ENST00000466636 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
SRPRB-202ENST00000466636 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
SRPRB-202ENST00000466636 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
SRPRB-202ENST00000466636 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
SRPRB-202ENST00000466636 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
SRPRB-202ENST00000466636 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
SRPRB-202ENST00000466636 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
SRPRB-202ENST00000466636 FOXD1Q16676 465 aa16.75■□□□□ 0.27
SRPRB-202ENST00000466636 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
SRPRB-202ENST00000466636 WIZO95785 1651 aa16.61■□□□□ 0.25
SRPRB-202ENST00000466636 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
SRPRB-202ENST00000466636 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
SRPRB-202ENST00000466636 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
SRPRB-202ENST00000466636 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
SRPRB-202ENST00000466636 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
SRPRB-202ENST00000466636 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
SRPRB-202ENST00000466636 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
SRPRB-202ENST00000466636 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
SRPRB-202ENST00000466636 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
SRPRB-202ENST00000466636 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
SRPRB-202ENST00000466636 TRIM41Q8WV44 630 aa16■□□□□ 0.15
SRPRB-202ENST00000466636 CFTRP13569 1480 aa15.97■□□□□ 0.15
SRPRB-202ENST00000466636 MSH5O43196 834 aa15.94■□□□□ 0.14
SRPRB-202ENST00000466636 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
SRPRB-202ENST00000466636 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
SRPRB-202ENST00000466636 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
SRPRB-202ENST00000466636 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
SRPRB-202ENST00000466636 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
SRPRB-202ENST00000466636 NESP48681 1621 aa15.76■□□□□ 0.11
SRPRB-202ENST00000466636 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
SRPRB-202ENST00000466636 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
SRPRB-202ENST00000466636 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
SRPRB-202ENST00000466636 ADRA2BP18089 450 aa15.73■□□□□ 0.11
SRPRB-202ENST00000466636 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
SRPRB-202ENST00000466636 CUX1P39880 1505 aa15.72■□□□□ 0.11
SRPRB-202ENST00000466636 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
SRPRB-202ENST00000466636 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
SRPRB-202ENST00000466636 SOGA1O94964 1423 aa15.68■□□□□ 0.1
SRPRB-202ENST00000466636 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
SRPRB-202ENST00000466636 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
SRPRB-202ENST00000466636 EEA1Q15075 1411 aa15.65■□□□□ 0.1
SRPRB-202ENST00000466636 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
SRPRB-202ENST00000466636 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
SRPRB-202ENST00000466636 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
SRPRB-202ENST00000466636 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.08
SRPRB-202ENST00000466636 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
SRPRB-202ENST00000466636 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
SRPRB-202ENST00000466636 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
SRPRB-202ENST00000466636 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
SRPRB-202ENST00000466636 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
SRPRB-202ENST00000466636 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
SRPRB-202ENST00000466636 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
SRPRB-202ENST00000466636 POLA1P09884 1462 aaPredicted RBP15.47■□□□□ 0.07
SRPRB-202ENST00000466636 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.07
SRPRB-202ENST00000466636 CUX2O14529 1486 aa15.44■□□□□ 0.06
SRPRB-202ENST00000466636 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
SRPRB-202ENST00000466636 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
SRPRB-202ENST00000466636 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
SRPRB-202ENST00000466636 KIF21BO75037 1637 aa15.42■□□□□ 0.06
SRPRB-202ENST00000466636 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
SRPRB-202ENST00000466636 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
SRPRB-202ENST00000466636 WDR62O43379 1518 aa15.38■□□□□ 0.05
SRPRB-202ENST00000466636 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
SRPRB-202ENST00000466636 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
SRPRB-202ENST00000466636 IGF1RP08069 1367 aa15.36■□□□□ 0.05
SRPRB-202ENST00000466636 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
SRPRB-202ENST00000466636 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.05
SRPRB-202ENST00000466636 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
SRPRB-202ENST00000466636 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
SRPRB-202ENST00000466636 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
SRPRB-202ENST00000466636 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
SRPRB-202ENST00000466636 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
SRPRB-202ENST00000466636 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
SRPRB-202ENST00000466636 KCNA4P22459 653 aa15.28■□□□□ 0.04
SRPRB-202ENST00000466636 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
SRPRB-202ENST00000466636 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
SRPRB-202ENST00000466636 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
SRPRB-202ENST00000466636 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
SRPRB-202ENST00000466636 CUL7Q14999 1698 aa15.19■□□□□ 0.02
SRPRB-202ENST00000466636 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.02
SRPRB-202ENST00000466636 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
SRPRB-202ENST00000466636 CLIP1P30622 1438 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms