RNA–Protein interactions for RNA: ENST00000612611.1

SHISA5-219, Transcript of shisa family member 5, humanhuman

TSL 5 BASIC

Gene SHISA5, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-219ENST00000612611 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
SHISA5-219ENST00000612611 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
SHISA5-219ENST00000612611 ABCC9O60706 1549 aa33.7■■■□□ 2.99
SHISA5-219ENST00000612611 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
SHISA5-219ENST00000612611 RB1CC1Q8TDY2 1594 aa32.34■■■□□ 2.77
SHISA5-219ENST00000612611 NACADO15069 1562 aa32.33■■■□□ 2.77
SHISA5-219ENST00000612611 ZCCHC6Q5VYS8 1495 aaKnown RBP32.21■■■□□ 2.75
SHISA5-219ENST00000612611 MYO15BQ96JP2 1530 aa32.14■■■□□ 2.74
SHISA5-219ENST00000612611 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
SHISA5-219ENST00000612611 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
SHISA5-219ENST00000612611 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
SHISA5-219ENST00000612611 BICRAQ9NZM4 1560 aa31.41■■■□□ 2.62
SHISA5-219ENST00000612611 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
SHISA5-219ENST00000612611 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
SHISA5-219ENST00000612611 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
SHISA5-219ENST00000612611 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
SHISA5-219ENST00000612611 CC2D2AQ9P2K1 1620 aa30.45■■■□□ 2.46
SHISA5-219ENST00000612611 CECR2Q9BXF3 1484 aa30.27■■■□□ 2.44
SHISA5-219ENST00000612611 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
SHISA5-219ENST00000612611 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
SHISA5-219ENST00000612611 NCAPD3P42695 1498 aa29.89■■■□□ 2.37
SHISA5-219ENST00000612611 ATAD2BQ9ULI0 1458 aa29.89■■■□□ 2.37
SHISA5-219ENST00000612611 MROH2BQ7Z745 1585 aa29.84■■■□□ 2.37
SHISA5-219ENST00000612611 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
SHISA5-219ENST00000612611 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
SHISA5-219ENST00000612611 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
SHISA5-219ENST00000612611 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
SHISA5-219ENST00000612611 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.31
SHISA5-219ENST00000612611 WIZO95785 1651 aa29.48■■■□□ 2.31
SHISA5-219ENST00000612611 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
SHISA5-219ENST00000612611 NESP48681 1621 aa29.16■■■□□ 2.26
SHISA5-219ENST00000612611 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
SHISA5-219ENST00000612611 LAMC3Q9Y6N6 1575 aa29.04■■■□□ 2.24
SHISA5-219ENST00000612611 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
SHISA5-219ENST00000612611 ERCC6Q03468 1493 aa29.02■■■□□ 2.24
SHISA5-219ENST00000612611 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
SHISA5-219ENST00000612611 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
SHISA5-219ENST00000612611 CFTRP13569 1480 aa28.83■■■□□ 2.21
SHISA5-219ENST00000612611 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
SHISA5-219ENST00000612611 CUX2O14529 1486 aa28.71■■■□□ 2.19
SHISA5-219ENST00000612611 THOC2Q8NI27 1593 aaKnown RBP28.66■■■□□ 2.18
SHISA5-219ENST00000612611 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
SHISA5-219ENST00000612611 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
SHISA5-219ENST00000612611 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
SHISA5-219ENST00000612611 WDR62O43379 1518 aa28.47■■■□□ 2.15
SHISA5-219ENST00000612611 PRDM2Q13029 1718 aa28.45■■■□□ 2.14
SHISA5-219ENST00000612611 URB2Q14146 1524 aaKnown RBP28.37■■■□□ 2.13
SHISA5-219ENST00000612611 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
SHISA5-219ENST00000612611 ABCC8Q09428 1581 aa28.17■■■□□ 2.1
SHISA5-219ENST00000612611 DNMBPQ6XZF7 1577 aa28.12■■■□□ 2.09
SHISA5-219ENST00000612611 IFT140Q96RY7 1462 aa28■■■□□ 2.07
SHISA5-219ENST00000612611 CUX1P39880 1505 aa27.97■■■□□ 2.07
SHISA5-219ENST00000612611 POLA1P09884 1462 aaPredicted RBP27.96■■■□□ 2.07
SHISA5-219ENST00000612611 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
SHISA5-219ENST00000612611 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
SHISA5-219ENST00000612611 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
SHISA5-219ENST00000612611 SOGA1O94964 1423 aa27.87■■■□□ 2.05
SHISA5-219ENST00000612611 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
SHISA5-219ENST00000612611 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
SHISA5-219ENST00000612611 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
SHISA5-219ENST00000612611 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.04
SHISA5-219ENST00000612611 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
SHISA5-219ENST00000612611 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
SHISA5-219ENST00000612611 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
SHISA5-219ENST00000612611 SYNJ1O43426 1573 aa27.7■■■□□ 2.02
SHISA5-219ENST00000612611 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
SHISA5-219ENST00000612611 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
SHISA5-219ENST00000612611 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
SHISA5-219ENST00000612611 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
SHISA5-219ENST00000612611 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
SHISA5-219ENST00000612611 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
SHISA5-219ENST00000612611 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
SHISA5-219ENST00000612611 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
SHISA5-219ENST00000612611 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
SHISA5-219ENST00000612611 FBLN2P98095 1184 aa27.46■■□□□ 1.99
SHISA5-219ENST00000612611 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
SHISA5-219ENST00000612611 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
SHISA5-219ENST00000612611 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
SHISA5-219ENST00000612611 PBRM1Q86U86 1689 aa27.37■■□□□ 1.97
SHISA5-219ENST00000612611 CHD1O14646 1710 aa27.35■■□□□ 1.97
SHISA5-219ENST00000612611 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
SHISA5-219ENST00000612611 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.96
SHISA5-219ENST00000612611 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
SHISA5-219ENST00000612611 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.95
SHISA5-219ENST00000612611 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
SHISA5-219ENST00000612611 IGF1RP08069 1367 aa27.17■■□□□ 1.94
SHISA5-219ENST00000612611 GRIN2AQ12879 1464 aa27.15■■□□□ 1.94
SHISA5-219ENST00000612611 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
SHISA5-219ENST00000612611 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
SHISA5-219ENST00000612611 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
SHISA5-219ENST00000612611 RIMBP3CA6NJZ7 1639 aa27.06■■□□□ 1.92
SHISA5-219ENST00000612611 RIMBP3BA6NNM3 1639 aa27.06■■□□□ 1.92
SHISA5-219ENST00000612611 RIMBP3Q9UFD9 1639 aa27.06■■□□□ 1.92
SHISA5-219ENST00000612611 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
SHISA5-219ENST00000612611 NUP160Q12769 1436 aa27.05■■□□□ 1.92
SHISA5-219ENST00000612611 CEP170Q5SW79 1584 aa27.01■■□□□ 1.91
SHISA5-219ENST00000612611 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
SHISA5-219ENST00000612611 CUL7Q14999 1698 aa26.96■■□□□ 1.91
SHISA5-219ENST00000612611 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
SHISA5-219ENST00000612611 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms