RNA–Protein interactions for RNA: ENST00000604534.5

TMEM56-RWDD3-202, Transcript of TMEM56-RWDD3 readthrough, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM56-RWDD3, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3-202ENST00000604534 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
TMEM56-RWDD3-202ENST00000604534 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
TMEM56-RWDD3-202ENST00000604534 ABCC9O60706 1549 aa28.45■■■□□ 2.14
TMEM56-RWDD3-202ENST00000604534 RB1CC1Q8TDY2 1594 aa27.51■■■□□ 2
TMEM56-RWDD3-202ENST00000604534 NACADO15069 1562 aa27.49■■□□□ 1.99
TMEM56-RWDD3-202ENST00000604534 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
TMEM56-RWDD3-202ENST00000604534 DCAF8L2P0C7V8 631 aa27.38■■□□□ 1.97
TMEM56-RWDD3-202ENST00000604534 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
TMEM56-RWDD3-202ENST00000604534 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
TMEM56-RWDD3-202ENST00000604534 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
TMEM56-RWDD3-202ENST00000604534 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
TMEM56-RWDD3-202ENST00000604534 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
TMEM56-RWDD3-202ENST00000604534 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
TMEM56-RWDD3-202ENST00000604534 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
TMEM56-RWDD3-202ENST00000604534 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
TMEM56-RWDD3-202ENST00000604534 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
TMEM56-RWDD3-202ENST00000604534 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
TMEM56-RWDD3-202ENST00000604534 SMARCA4P51532 1647 aa25.58■■□□□ 1.68
TMEM56-RWDD3-202ENST00000604534 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
TMEM56-RWDD3-202ENST00000604534 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
TMEM56-RWDD3-202ENST00000604534 SMARCA2P51531 1590 aa25.39■■□□□ 1.65
TMEM56-RWDD3-202ENST00000604534 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
TMEM56-RWDD3-202ENST00000604534 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
TMEM56-RWDD3-202ENST00000604534 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
TMEM56-RWDD3-202ENST00000604534 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
TMEM56-RWDD3-202ENST00000604534 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
TMEM56-RWDD3-202ENST00000604534 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
TMEM56-RWDD3-202ENST00000604534 WIZO95785 1651 aa25.14■■□□□ 1.62
TMEM56-RWDD3-202ENST00000604534 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
TMEM56-RWDD3-202ENST00000604534 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
TMEM56-RWDD3-202ENST00000604534 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
TMEM56-RWDD3-202ENST00000604534 NESP48681 1621 aa24.63■■□□□ 1.53
TMEM56-RWDD3-202ENST00000604534 ERCC6Q03468 1493 aa24.58■■□□□ 1.52
TMEM56-RWDD3-202ENST00000604534 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
TMEM56-RWDD3-202ENST00000604534 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
TMEM56-RWDD3-202ENST00000604534 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
TMEM56-RWDD3-202ENST00000604534 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
TMEM56-RWDD3-202ENST00000604534 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
TMEM56-RWDD3-202ENST00000604534 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
TMEM56-RWDD3-202ENST00000604534 CFTRP13569 1480 aa24.45■■□□□ 1.5
TMEM56-RWDD3-202ENST00000604534 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
TMEM56-RWDD3-202ENST00000604534 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
TMEM56-RWDD3-202ENST00000604534 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
TMEM56-RWDD3-202ENST00000604534 CUX2O14529 1486 aa24.25■■□□□ 1.47
TMEM56-RWDD3-202ENST00000604534 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
TMEM56-RWDD3-202ENST00000604534 WDR62O43379 1518 aa24.16■■□□□ 1.46
TMEM56-RWDD3-202ENST00000604534 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
TMEM56-RWDD3-202ENST00000604534 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
TMEM56-RWDD3-202ENST00000604534 DNMBPQ6XZF7 1577 aa23.97■■□□□ 1.43
TMEM56-RWDD3-202ENST00000604534 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
TMEM56-RWDD3-202ENST00000604534 CUX1P39880 1505 aa23.8■■□□□ 1.4
TMEM56-RWDD3-202ENST00000604534 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
TMEM56-RWDD3-202ENST00000604534 POLA1P09884 1462 aaPredicted RBP23.74■■□□□ 1.39
TMEM56-RWDD3-202ENST00000604534 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
TMEM56-RWDD3-202ENST00000604534 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
TMEM56-RWDD3-202ENST00000604534 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
TMEM56-RWDD3-202ENST00000604534 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
TMEM56-RWDD3-202ENST00000604534 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
TMEM56-RWDD3-202ENST00000604534 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
TMEM56-RWDD3-202ENST00000604534 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
TMEM56-RWDD3-202ENST00000604534 SOGA1O94964 1423 aa23.61■■□□□ 1.37
TMEM56-RWDD3-202ENST00000604534 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
TMEM56-RWDD3-202ENST00000604534 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
TMEM56-RWDD3-202ENST00000604534 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
TMEM56-RWDD3-202ENST00000604534 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
TMEM56-RWDD3-202ENST00000604534 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.351e-6■■■■■ 33.6
TMEM56-RWDD3-202ENST00000604534 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
TMEM56-RWDD3-202ENST00000604534 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
TMEM56-RWDD3-202ENST00000604534 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
TMEM56-RWDD3-202ENST00000604534 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
TMEM56-RWDD3-202ENST00000604534 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
TMEM56-RWDD3-202ENST00000604534 CHD1O14646 1710 aa23.33■■□□□ 1.33
TMEM56-RWDD3-202ENST00000604534 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
TMEM56-RWDD3-202ENST00000604534 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
TMEM56-RWDD3-202ENST00000604534 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
TMEM56-RWDD3-202ENST00000604534 DNAJC5Q9H3Z4 198 aa23.23■■□□□ 1.31
TMEM56-RWDD3-202ENST00000604534 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
TMEM56-RWDD3-202ENST00000604534 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
TMEM56-RWDD3-202ENST00000604534 SYNJ2O15056 1496 aa23.21■■□□□ 1.31
TMEM56-RWDD3-202ENST00000604534 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
TMEM56-RWDD3-202ENST00000604534 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
TMEM56-RWDD3-202ENST00000604534 FBLN2P98095 1184 aa23.17■■□□□ 1.3
TMEM56-RWDD3-202ENST00000604534 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
TMEM56-RWDD3-202ENST00000604534 CUL7Q14999 1698 aa23.13■■□□□ 1.29
TMEM56-RWDD3-202ENST00000604534 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
TMEM56-RWDD3-202ENST00000604534 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
TMEM56-RWDD3-202ENST00000604534 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
TMEM56-RWDD3-202ENST00000604534 IGF1RP08069 1367 aa23■■□□□ 1.27
TMEM56-RWDD3-202ENST00000604534 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 RUSC2Q8N2Y8 1516 aa22.95■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 NUP160Q12769 1436 aa22.93■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
TMEM56-RWDD3-202ENST00000604534 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
TMEM56-RWDD3-202ENST00000604534 EEA1Q15075 1411 aa22.88■■□□□ 1.25
TMEM56-RWDD3-202ENST00000604534 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
TMEM56-RWDD3-202ENST00000604534 SHROOM2Q13796 1616 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms