RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
SHISA5-216ENST00000494854 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
SHISA5-216ENST00000494854 ABCC9O60706 1549 aa31.33■■■□□ 2.61
SHISA5-216ENST00000494854 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
SHISA5-216ENST00000494854 NACADO15069 1562 aa30.03■■■□□ 2.4
SHISA5-216ENST00000494854 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
SHISA5-216ENST00000494854 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
SHISA5-216ENST00000494854 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
SHISA5-216ENST00000494854 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
SHISA5-216ENST00000494854 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
SHISA5-216ENST00000494854 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
SHISA5-216ENST00000494854 BICRAQ9NZM4 1560 aa29.19■■■□□ 2.26
SHISA5-216ENST00000494854 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
SHISA5-216ENST00000494854 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
SHISA5-216ENST00000494854 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
SHISA5-216ENST00000494854 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
SHISA5-216ENST00000494854 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
SHISA5-216ENST00000494854 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.11
SHISA5-216ENST00000494854 SMARCA4P51532 1647 aa27.75■■■□□ 2.03
SHISA5-216ENST00000494854 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
SHISA5-216ENST00000494854 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
SHISA5-216ENST00000494854 ATAD2BQ9ULI0 1458 aa27.67■■■□□ 2.02
SHISA5-216ENST00000494854 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
SHISA5-216ENST00000494854 HMGXB3Q12766 1538 aa27.54■■■□□ 2
SHISA5-216ENST00000494854 PEG3Q9GZU2 1588 aa27.53■■■□□ 2
SHISA5-216ENST00000494854 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
SHISA5-216ENST00000494854 BAZ1BQ9UIG0 1483 aaKnown RBP27.41■■□□□ 1.98
SHISA5-216ENST00000494854 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
SHISA5-216ENST00000494854 WIZO95785 1651 aa27.18■■□□□ 1.94
SHISA5-216ENST00000494854 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
SHISA5-216ENST00000494854 NESP48681 1621 aa27.05■■□□□ 1.92
SHISA5-216ENST00000494854 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
SHISA5-216ENST00000494854 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.91
SHISA5-216ENST00000494854 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
SHISA5-216ENST00000494854 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
SHISA5-216ENST00000494854 CUX2O14529 1486 aa26.88■■□□□ 1.89
SHISA5-216ENST00000494854 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
SHISA5-216ENST00000494854 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
SHISA5-216ENST00000494854 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
SHISA5-216ENST00000494854 CFTRP13569 1480 aa26.68■■□□□ 1.86
SHISA5-216ENST00000494854 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
SHISA5-216ENST00000494854 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
SHISA5-216ENST00000494854 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
SHISA5-216ENST00000494854 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
SHISA5-216ENST00000494854 WDR62O43379 1518 aa26.48■■□□□ 1.83
SHISA5-216ENST00000494854 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
SHISA5-216ENST00000494854 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
SHISA5-216ENST00000494854 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
SHISA5-216ENST00000494854 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
SHISA5-216ENST00000494854 ABCC8Q09428 1581 aa26.14■■□□□ 1.77
SHISA5-216ENST00000494854 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
SHISA5-216ENST00000494854 DNMBPQ6XZF7 1577 aa26.05■■□□□ 1.76
SHISA5-216ENST00000494854 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
SHISA5-216ENST00000494854 ZNF608Q9ULD9 1512 aaPredicted RBP25.87■■□□□ 1.73
SHISA5-216ENST00000494854 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
SHISA5-216ENST00000494854 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
SHISA5-216ENST00000494854 CUX1P39880 1505 aa25.81■■□□□ 1.72
SHISA5-216ENST00000494854 SOGA1O94964 1423 aa25.76■■□□□ 1.71
SHISA5-216ENST00000494854 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
SHISA5-216ENST00000494854 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
SHISA5-216ENST00000494854 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
SHISA5-216ENST00000494854 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
SHISA5-216ENST00000494854 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.71
SHISA5-216ENST00000494854 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
SHISA5-216ENST00000494854 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
SHISA5-216ENST00000494854 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
SHISA5-216ENST00000494854 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
SHISA5-216ENST00000494854 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
SHISA5-216ENST00000494854 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
SHISA5-216ENST00000494854 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
SHISA5-216ENST00000494854 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
SHISA5-216ENST00000494854 GRIN2BQ13224 1484 aa25.49■■□□□ 1.67
SHISA5-216ENST00000494854 CHD1O14646 1710 aa25.48■■□□□ 1.67
SHISA5-216ENST00000494854 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
SHISA5-216ENST00000494854 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
SHISA5-216ENST00000494854 GAPVD1Q14C86 1478 aa25.45■■□□□ 1.67
SHISA5-216ENST00000494854 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
SHISA5-216ENST00000494854 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
SHISA5-216ENST00000494854 FBLN2P98095 1184 aa25.41■■□□□ 1.66
SHISA5-216ENST00000494854 PBRM1Q86U86 1689 aa25.39■■□□□ 1.66
SHISA5-216ENST00000494854 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
SHISA5-216ENST00000494854 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
SHISA5-216ENST00000494854 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
SHISA5-216ENST00000494854 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
SHISA5-216ENST00000494854 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
SHISA5-216ENST00000494854 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
SHISA5-216ENST00000494854 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
SHISA5-216ENST00000494854 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
SHISA5-216ENST00000494854 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
SHISA5-216ENST00000494854 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
SHISA5-216ENST00000494854 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
SHISA5-216ENST00000494854 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
SHISA5-216ENST00000494854 NUP160Q12769 1436 aa25.07■■□□□ 1.6
SHISA5-216ENST00000494854 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
SHISA5-216ENST00000494854 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
SHISA5-216ENST00000494854 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
SHISA5-216ENST00000494854 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
SHISA5-216ENST00000494854 IGF1RP08069 1367 aa25.02■■□□□ 1.6
SHISA5-216ENST00000494854 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
SHISA5-216ENST00000494854 CUL7Q14999 1698 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms