RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
LINC01287-203ENST00000454441 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
LINC01287-203ENST00000454441 ABCC9O60706 1549 aa26.22■■□□□ 1.79
LINC01287-203ENST00000454441 AEBP2Q6ZN18 517 aaPredicted RBP25.99■■□□□ 1.75
LINC01287-203ENST00000454441 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
LINC01287-203ENST00000454441 NACADO15069 1562 aa24.93■■□□□ 1.58
LINC01287-203ENST00000454441 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
LINC01287-203ENST00000454441 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
LINC01287-203ENST00000454441 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
LINC01287-203ENST00000454441 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
LINC01287-203ENST00000454441 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
LINC01287-203ENST00000454441 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
LINC01287-203ENST00000454441 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
LINC01287-203ENST00000454441 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
LINC01287-203ENST00000454441 BICRAQ9NZM4 1560 aa24.31■■□□□ 1.48
LINC01287-203ENST00000454441 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
LINC01287-203ENST00000454441 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
LINC01287-203ENST00000454441 CC2D2AQ9P2K1 1620 aa23.72■■□□□ 1.39
LINC01287-203ENST00000454441 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
LINC01287-203ENST00000454441 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
LINC01287-203ENST00000454441 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
LINC01287-203ENST00000454441 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
LINC01287-203ENST00000454441 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
LINC01287-203ENST00000454441 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
LINC01287-203ENST00000454441 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
LINC01287-203ENST00000454441 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
LINC01287-203ENST00000454441 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
LINC01287-203ENST00000454441 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
LINC01287-203ENST00000454441 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
LINC01287-203ENST00000454441 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
LINC01287-203ENST00000454441 NESP48681 1621 aa22.57■■□□□ 1.2
LINC01287-203ENST00000454441 WIZO95785 1651 aa22.53■■□□□ 1.2
LINC01287-203ENST00000454441 CUX2O14529 1486 aa22.51■■□□□ 1.19
LINC01287-203ENST00000454441 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
LINC01287-203ENST00000454441 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
LINC01287-203ENST00000454441 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
LINC01287-203ENST00000454441 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
LINC01287-203ENST00000454441 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
LINC01287-203ENST00000454441 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
LINC01287-203ENST00000454441 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
LINC01287-203ENST00000454441 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
LINC01287-203ENST00000454441 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
LINC01287-203ENST00000454441 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
LINC01287-203ENST00000454441 CFTRP13569 1480 aa22.09■■□□□ 1.13
LINC01287-203ENST00000454441 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
LINC01287-203ENST00000454441 WDR62O43379 1518 aa22.06■■□□□ 1.12
LINC01287-203ENST00000454441 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
LINC01287-203ENST00000454441 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
LINC01287-203ENST00000454441 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
LINC01287-203ENST00000454441 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
LINC01287-203ENST00000454441 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
LINC01287-203ENST00000454441 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
LINC01287-203ENST00000454441 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
LINC01287-203ENST00000454441 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
LINC01287-203ENST00000454441 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
LINC01287-203ENST00000454441 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
LINC01287-203ENST00000454441 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
LINC01287-203ENST00000454441 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
LINC01287-203ENST00000454441 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
LINC01287-203ENST00000454441 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
LINC01287-203ENST00000454441 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
LINC01287-203ENST00000454441 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.018e-7■■■□□ 17.3
LINC01287-203ENST00000454441 CUX1P39880 1505 aa21.37■■□□□ 1.01
LINC01287-203ENST00000454441 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
LINC01287-203ENST00000454441 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
LINC01287-203ENST00000454441 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
LINC01287-203ENST00000454441 SOGA1O94964 1423 aa21.35■■□□□ 1.01
LINC01287-203ENST00000454441 CHD1O14646 1710 aa21.33■■□□□ 1.01
LINC01287-203ENST00000454441 WDR97A6NE52 1622 aa21.29■■□□□ 1
LINC01287-203ENST00000454441 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
LINC01287-203ENST00000454441 RIMBP3CA6NJZ7 1639 aa21.25■□□□□ 0.99
LINC01287-203ENST00000454441 RIMBP3BA6NNM3 1639 aa21.25■□□□□ 0.99
LINC01287-203ENST00000454441 RIMBP3Q9UFD9 1639 aa21.25■□□□□ 0.99
LINC01287-203ENST00000454441 FBLN2P98095 1184 aa21.21■□□□□ 0.99
LINC01287-203ENST00000454441 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
LINC01287-203ENST00000454441 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
LINC01287-203ENST00000454441 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
LINC01287-203ENST00000454441 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
LINC01287-203ENST00000454441 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
LINC01287-203ENST00000454441 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
LINC01287-203ENST00000454441 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
LINC01287-203ENST00000454441 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
LINC01287-203ENST00000454441 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
LINC01287-203ENST00000454441 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
LINC01287-203ENST00000454441 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
LINC01287-203ENST00000454441 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
LINC01287-203ENST00000454441 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
LINC01287-203ENST00000454441 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
LINC01287-203ENST00000454441 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
LINC01287-203ENST00000454441 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
LINC01287-203ENST00000454441 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
LINC01287-203ENST00000454441 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
LINC01287-203ENST00000454441 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
LINC01287-203ENST00000454441 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
LINC01287-203ENST00000454441 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
LINC01287-203ENST00000454441 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
LINC01287-203ENST00000454441 FOXD1Q16676 465 aa20.8■□□□□ 0.92
LINC01287-203ENST00000454441 NUP160Q12769 1436 aa20.79■□□□□ 0.92
LINC01287-203ENST00000454441 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
LINC01287-203ENST00000454441 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms