RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
SNRNP35-203ENST00000526639 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
SNRNP35-203ENST00000526639 ABCC9O60706 1549 aa23.9■■□□□ 1.42
SNRNP35-203ENST00000526639 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
SNRNP35-203ENST00000526639 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
SNRNP35-203ENST00000526639 NACADO15069 1562 aa22.75■■□□□ 1.23
SNRNP35-203ENST00000526639 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.2
SNRNP35-203ENST00000526639 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
SNRNP35-203ENST00000526639 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.18
SNRNP35-203ENST00000526639 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
SNRNP35-203ENST00000526639 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
SNRNP35-203ENST00000526639 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
SNRNP35-203ENST00000526639 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
SNRNP35-203ENST00000526639 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
SNRNP35-203ENST00000526639 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
SNRNP35-203ENST00000526639 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
SNRNP35-203ENST00000526639 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
SNRNP35-203ENST00000526639 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
SNRNP35-203ENST00000526639 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.02
SNRNP35-203ENST00000526639 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
SNRNP35-203ENST00000526639 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
SNRNP35-203ENST00000526639 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
SNRNP35-203ENST00000526639 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
SNRNP35-203ENST00000526639 SMARCA2P51531 1590 aa20.97■□□□□ 0.95
SNRNP35-203ENST00000526639 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
SNRNP35-203ENST00000526639 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
SNRNP35-203ENST00000526639 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
SNRNP35-203ENST00000526639 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
SNRNP35-203ENST00000526639 WIZO95785 1651 aa20.74■□□□□ 0.91
SNRNP35-203ENST00000526639 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
SNRNP35-203ENST00000526639 NESP48681 1621 aa20.65■□□□□ 0.9
SNRNP35-203ENST00000526639 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
SNRNP35-203ENST00000526639 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
SNRNP35-203ENST00000526639 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
SNRNP35-203ENST00000526639 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
SNRNP35-203ENST00000526639 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
SNRNP35-203ENST00000526639 CUX2O14529 1486 aa20.35■□□□□ 0.85
SNRNP35-203ENST00000526639 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
SNRNP35-203ENST00000526639 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
SNRNP35-203ENST00000526639 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
SNRNP35-203ENST00000526639 CFTRP13569 1480 aa20.27■□□□□ 0.84
SNRNP35-203ENST00000526639 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
SNRNP35-203ENST00000526639 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
SNRNP35-203ENST00000526639 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
SNRNP35-203ENST00000526639 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
SNRNP35-203ENST00000526639 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
SNRNP35-203ENST00000526639 WDR62O43379 1518 aa20.09■□□□□ 0.81
SNRNP35-203ENST00000526639 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
SNRNP35-203ENST00000526639 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
SNRNP35-203ENST00000526639 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
SNRNP35-203ENST00000526639 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
SNRNP35-203ENST00000526639 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
SNRNP35-203ENST00000526639 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
SNRNP35-203ENST00000526639 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
SNRNP35-203ENST00000526639 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
SNRNP35-203ENST00000526639 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
SNRNP35-203ENST00000526639 CUX1P39880 1505 aa19.66■□□□□ 0.74
SNRNP35-203ENST00000526639 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
SNRNP35-203ENST00000526639 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
SNRNP35-203ENST00000526639 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
SNRNP35-203ENST00000526639 SOGA1O94964 1423 aa19.62■□□□□ 0.73
SNRNP35-203ENST00000526639 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.73
SNRNP35-203ENST00000526639 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
SNRNP35-203ENST00000526639 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
SNRNP35-203ENST00000526639 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
SNRNP35-203ENST00000526639 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
SNRNP35-203ENST00000526639 FBLN2P98095 1184 aa19.48■□□□□ 0.71
SNRNP35-203ENST00000526639 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
SNRNP35-203ENST00000526639 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
SNRNP35-203ENST00000526639 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
SNRNP35-203ENST00000526639 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
SNRNP35-203ENST00000526639 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
SNRNP35-203ENST00000526639 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.7
SNRNP35-203ENST00000526639 CHD1O14646 1710 aa19.39■□□□□ 0.69
SNRNP35-203ENST00000526639 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
SNRNP35-203ENST00000526639 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
SNRNP35-203ENST00000526639 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
SNRNP35-203ENST00000526639 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
SNRNP35-203ENST00000526639 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
SNRNP35-203ENST00000526639 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
SNRNP35-203ENST00000526639 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
SNRNP35-203ENST00000526639 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
SNRNP35-203ENST00000526639 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
SNRNP35-203ENST00000526639 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
SNRNP35-203ENST00000526639 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
SNRNP35-203ENST00000526639 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
SNRNP35-203ENST00000526639 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
SNRNP35-203ENST00000526639 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.66
SNRNP35-203ENST00000526639 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.66
SNRNP35-203ENST00000526639 CYB5RLQ6IPT4 315 aa19.14■□□□□ 0.65
SNRNP35-203ENST00000526639 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
SNRNP35-203ENST00000526639 FHAD1B1AJZ9 1412 aa19.13■□□□□ 0.65
SNRNP35-203ENST00000526639 KIF27Q86VH2 1401 aa19.08■□□□□ 0.64
SNRNP35-203ENST00000526639 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
SNRNP35-203ENST00000526639 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
SNRNP35-203ENST00000526639 IGF1RP08069 1367 aa19.05■□□□□ 0.64
SNRNP35-203ENST00000526639 NUP160Q12769 1436 aa19.04■□□□□ 0.64
SNRNP35-203ENST00000526639 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
SNRNP35-203ENST00000526639 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
SNRNP35-203ENST00000526639 CUL7Q14999 1698 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms