Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 GUK1-233ENST00000491613 959 ntTSL 321■□□□□ 0.957e-8■□□□□ 11
DROSHAQ9NRR4 TMEM258-202ENST00000535042 921 ntTSL 320.1■□□□□ 0.814e-9■□□□□ 11
DROSHAQ9NRR4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.493e-7■□□□□ 11
DROSHAQ9NRR4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC22.49■■□□□ 1.193e-7■□□□□ 11
DROSHAQ9NRR4 TMEM258-203ENST00000535297 395 ntTSL 221.23■□□□□ 0.993e-7■□□□□ 11
DROSHAQ9NRR4 TMEM258-208ENST00000545210 579 ntTSL 318.58■□□□□ 0.573e-7■□□□□ 11
DROSHAQ9NRR4 TMEM258-205ENST00000540434 553 ntTSL 218.06■□□□□ 0.483e-7■□□□□ 11
DROSHAQ9NRR4 TMEM258-201ENST00000257262 468 ntTSL 313.04□□□□□ -0.323e-7■□□□□ 11
DROSHAQ9NRR4 TMEM258-206ENST00000541893 517 ntTSL 58.11□□□□□ -1.113e-7■□□□□ 11
DROSHAQ9NRR4 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)15.72■□□□□ 0.113e-7■□□□□ 11
DROSHAQ9NRR4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.92□□□□□ -0.823e-7■□□□□ 11
DROSHAQ9NRR4 DYRK1A-205ENST00000426672 519 ntTSL 54.23□□□□□ -1.733e-7■□□□□ 11
DROSHAQ9NRR4 CHPT1-210ENST00000552351 1524 ntTSL 241.41■■■■■ 4.226e-6■□□□□ 11
DROSHAQ9NRR4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.166e-6■□□□□ 11
DROSHAQ9NRR4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC40.26■■■■■ 4.046e-6■□□□□ 11
DROSHAQ9NRR4 CHPT1-204ENST00000549128 1552 ntTSL 540.26■■■■■ 4.046e-6■□□□□ 11
DROSHAQ9NRR4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC40.02■■■■■ 46e-6■□□□□ 11
DROSHAQ9NRR4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC38.16■■■■□ 3.76e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-208ENST00000474414 978 ntTSL 533.85■■■■□ 3.016e-6■□□□□ 11
DROSHAQ9NRR4 SYPL1-206ENST00000483448 478 ntTSL 433.12■■■□□ 2.892e-8■□□□□ 11
DROSHAQ9NRR4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.876e-6■□□□□ 11
DROSHAQ9NRR4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC32.86■■■□□ 2.856e-6■□□□□ 11
DROSHAQ9NRR4 COQ8A-206ENST00000479852 1938 ntTSL 1 (best)32.31■■■□□ 2.766e-6■□□□□ 11
DROSHAQ9NRR4 PTPN18-211ENST00000481492 1394 ntTSL 231.58■■■□□ 2.656e-6■□□□□ 11
DROSHAQ9NRR4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC31.16■■■□□ 2.586e-6■□□□□ 11
DROSHAQ9NRR4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.571e-7■□□□□ 11
DROSHAQ9NRR4 PTPN18-207ENST00000462321 1717 ntTSL 230.25■■■□□ 2.436e-6■□□□□ 11
DROSHAQ9NRR4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC29.29■■■□□ 2.286e-6■□□□□ 11
DROSHAQ9NRR4 CHPT1-202ENST00000546490 476 ntTSL 229.23■■■□□ 2.276e-6■□□□□ 11
DROSHAQ9NRR4 LGALS1-202ENST00000425542 637 ntTSL 328.73■■■□□ 2.196e-6■□□□□ 11
DROSHAQ9NRR4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.146e-6■□□□□ 11
DROSHAQ9NRR4 PTPN18-203ENST00000409022 993 ntTSL 328.3■■■□□ 2.126e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC27.92■■■□□ 2.066e-6■□□□□ 11
DROSHAQ9NRR4 UNC13D-212ENST00000589670 668 ntTSL 327.55■■■□□ 26e-6■□□□□ 11
DROSHAQ9NRR4 HIST1H3D-203ENST00000635641 1637 ntTSL 527.34■■□□□ 1.976e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-213ENST00000530753 571 ntTSL 427.18■■□□□ 1.946e-6■□□□□ 11
DROSHAQ9NRR4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.916e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.856e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.826e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-214ENST00000530876 570 ntTSL 226.4■■□□□ 1.826e-6■□□□□ 11
DROSHAQ9NRR4 PLK1-209ENST00000570220 910 ntTSL 326.26■■□□□ 1.796e-6■□□□□ 11
DROSHAQ9NRR4 THOP1-210ENST00000590533 616 ntTSL 225.88■■□□□ 1.736e-6■□□□□ 11
DROSHAQ9NRR4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.636e-6■□□□□ 11
DROSHAQ9NRR4 THOP1-212ENST00000591149 789 ntTSL 325.01■■□□□ 1.596e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC24.86■■□□□ 1.576e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-202ENST00000373520 1630 ntTSL 224.54■■□□□ 1.526e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.56e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC24.17■■□□□ 1.466e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC24.09■■□□□ 1.456e-6■□□□□ 11
DROSHAQ9NRR4 LGALS1-203ENST00000454173 331 ntTSL 524.07■■□□□ 1.446e-6■□□□□ 11
DROSHAQ9NRR4 PLK1-204ENST00000564202 584 ntTSL 324.03■■□□□ 1.446e-6■□□□□ 11
DROSHAQ9NRR4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC24■■□□□ 1.436e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-212ENST00000444626 560 ntTSL 523.19■■□□□ 1.36e-6■□□□□ 11
DROSHAQ9NRR4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.246e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC22.4■■□□□ 1.186e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC22.03■■□□□ 1.126e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC21.97■■□□□ 1.116e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-210ENST00000527163 567 ntTSL 521.96■■□□□ 1.116e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-211ENST00000527513 576 ntTSL 521.96■■□□□ 1.116e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-213ENST00000447973 582 ntTSL 421.87■■□□□ 1.096e-6■□□□□ 11
DROSHAQ9NRR4 TMEM41B-201ENST00000299596 1443 ntTSL 1 (best)21.45■■□□□ 1.026e-6■□□□□ 11
DROSHAQ9NRR4 LGALS1-204ENST00000464120 303 ntTSL 221.34■■□□□ 1.016e-6■□□□□ 11
DROSHAQ9NRR4 MARCH6-203ENST00000502795 580 ntTSL 421.21■□□□□ 0.996e-6■□□□□ 11
DROSHAQ9NRR4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.986e-6■□□□□ 11
DROSHAQ9NRR4 AGO2-203ENST00000518019 421 ntTSL 221.04■□□□□ 0.966e-6■□□□□ 11
DROSHAQ9NRR4 FAM160B2-210ENST00000496599 2344 ntTSL 220.29■□□□□ 0.846e-6■□□□□ 11
DROSHAQ9NRR4 PDLIM7-212ENST00000504380 556 ntTSL 220.21■□□□□ 0.836e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-210ENST00000436425 553 ntTSL 420.1■□□□□ 0.816e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-212ENST00000530485 482 ntTSL 519.63■□□□□ 0.736e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC19.3■□□□□ 0.686e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-216ENST00000533084 564 ntTSL 319.1■□□□□ 0.656e-6■□□□□ 11
DROSHAQ9NRR4 MARCH6-209ENST00000510872 577 ntTSL 419.09■□□□□ 0.656e-6■□□□□ 11
DROSHAQ9NRR4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.636e-6■□□□□ 11
DROSHAQ9NRR4 PDLIM7-214ENST00000505746 405 ntTSL 518.76■□□□□ 0.596e-6■□□□□ 11
DROSHAQ9NRR4 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.532e-8■□□□□ 11
DROSHAQ9NRR4 UBE2Z-204ENST00000506498 766 ntTSL 418.3■□□□□ 0.526e-6■□□□□ 11
DROSHAQ9NRR4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.56e-6■□□□□ 11
DROSHAQ9NRR4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.496e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.426e-6■□□□□ 11
DROSHAQ9NRR4 RPL37-202ENST00000504562 505 ntTSL 217.42■□□□□ 0.386e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC16.99■□□□□ 0.316e-6■□□□□ 11
DROSHAQ9NRR4 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.256e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-217ENST00000483415 3231 ntTSL 1 (best)16.5■□□□□ 0.236e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC16.46■□□□□ 0.236e-6■□□□□ 11
DROSHAQ9NRR4 SYPL1-202ENST00000455385 2151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.212e-8■□□□□ 11
DROSHAQ9NRR4 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC16.38■□□□□ 0.216e-6■□□□□ 11
DROSHAQ9NRR4 ZBTB40-203ENST00000400239 1855 ntTSL 516.27■□□□□ 0.26e-6■□□□□ 11
DROSHAQ9NRR4 TMEM41B-202ENST00000524543 3848 ntTSL 216.16■□□□□ 0.186e-6■□□□□ 11
DROSHAQ9NRR4 CHPT1-206ENST00000550385 754 ntTSL 516.12■□□□□ 0.176e-6■□□□□ 11
DROSHAQ9NRR4 PLK1-202ENST00000562272 4135 ntTSL 215.52■□□□□ 0.076e-6■□□□□ 11
DROSHAQ9NRR4 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)14.81□□□□□ -0.046e-6■□□□□ 11
DROSHAQ9NRR4 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC14.54□□□□□ -0.086e-6■□□□□ 11
DROSHAQ9NRR4 EWSR1-211ENST00000437155 933 ntTSL 514.19□□□□□ -0.146e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-206ENST00000448002 2582 ntTSL 1 (best)13.85□□□□□ -0.196e-6■□□□□ 11
DROSHAQ9NRR4 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC13.64□□□□□ -0.236e-6■□□□□ 11
DROSHAQ9NRR4 LGALS1-206ENST00000480207 185 ntTSL 512.76□□□□□ -0.376e-6■□□□□ 11
DROSHAQ9NRR4 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC12.66□□□□□ -0.382e-8■□□□□ 11
DROSHAQ9NRR4 RPL37-205ENST00000509877 637 ntTSL 5 BASIC12.63□□□□□ -0.396e-6■□□□□ 11
DROSHAQ9NRR4 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC11.48□□□□□ -0.576e-6■□□□□ 11
DROSHAQ9NRR4 RPL37-203ENST00000507642 425 ntTSL 311.19□□□□□ -0.626e-6■□□□□ 11
Retrieved 100 of 16,331 protein–RNA pairs in 74 ms