RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
TMEM41B-201ENST00000299596 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.49
TMEM41B-201ENST00000299596 ABCC9O60706 1549 aa30.46■■■□□ 2.47
TMEM41B-201ENST00000299596 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
TMEM41B-201ENST00000299596 NACADO15069 1562 aa28.97■■■□□ 2.23
TMEM41B-201ENST00000299596 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
TMEM41B-201ENST00000299596 MYO15BQ96JP2 1530 aa28.68■■■□□ 2.18
TMEM41B-201ENST00000299596 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
TMEM41B-201ENST00000299596 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.143e-6■■□□□ 12.4
TMEM41B-201ENST00000299596 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
TMEM41B-201ENST00000299596 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
TMEM41B-201ENST00000299596 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
TMEM41B-201ENST00000299596 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.1
TMEM41B-201ENST00000299596 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
TMEM41B-201ENST00000299596 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
TMEM41B-201ENST00000299596 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
TMEM41B-201ENST00000299596 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
TMEM41B-201ENST00000299596 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
TMEM41B-201ENST00000299596 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
TMEM41B-201ENST00000299596 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.86
TMEM41B-201ENST00000299596 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
TMEM41B-201ENST00000299596 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
TMEM41B-201ENST00000299596 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
TMEM41B-201ENST00000299596 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
TMEM41B-201ENST00000299596 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
TMEM41B-201ENST00000299596 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
TMEM41B-201ENST00000299596 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
TMEM41B-201ENST00000299596 ERCC6Q03468 1493 aa26.31■■□□□ 1.8
TMEM41B-201ENST00000299596 NESP48681 1621 aa26.21■■□□□ 1.79
TMEM41B-201ENST00000299596 CUX2O14529 1486 aa26.19■■□□□ 1.78
TMEM41B-201ENST00000299596 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
TMEM41B-201ENST00000299596 WIZO95785 1651 aa26.07■■□□□ 1.76
TMEM41B-201ENST00000299596 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
TMEM41B-201ENST00000299596 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
TMEM41B-201ENST00000299596 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
TMEM41B-201ENST00000299596 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
TMEM41B-201ENST00000299596 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
TMEM41B-201ENST00000299596 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
TMEM41B-201ENST00000299596 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
TMEM41B-201ENST00000299596 CFTRP13569 1480 aa25.71■■□□□ 1.71
TMEM41B-201ENST00000299596 MRC2Q9UBG0 1479 aa25.7■■□□□ 1.7
TMEM41B-201ENST00000299596 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
TMEM41B-201ENST00000299596 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
TMEM41B-201ENST00000299596 WDR62O43379 1518 aa25.61■■□□□ 1.69
TMEM41B-201ENST00000299596 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
TMEM41B-201ENST00000299596 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
TMEM41B-201ENST00000299596 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
TMEM41B-201ENST00000299596 ABCC8Q09428 1581 aa25.2■■□□□ 1.62
TMEM41B-201ENST00000299596 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
TMEM41B-201ENST00000299596 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
TMEM41B-201ENST00000299596 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
TMEM41B-201ENST00000299596 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
TMEM41B-201ENST00000299596 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
TMEM41B-201ENST00000299596 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
TMEM41B-201ENST00000299596 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
TMEM41B-201ENST00000299596 TARBP1Q13395 1621 aaKnown RBP24.9■■□□□ 1.58
TMEM41B-201ENST00000299596 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
TMEM41B-201ENST00000299596 AQRO60306 1485 aaKnown RBP eCLIP24.88■■□□□ 1.57
TMEM41B-201ENST00000299596 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
TMEM41B-201ENST00000299596 SOGA1O94964 1423 aa24.87■■□□□ 1.57
TMEM41B-201ENST00000299596 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
TMEM41B-201ENST00000299596 CUX1P39880 1505 aa24.81■■□□□ 1.56
TMEM41B-201ENST00000299596 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
TMEM41B-201ENST00000299596 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
TMEM41B-201ENST00000299596 FBLN2P98095 1184 aa24.72■■□□□ 1.55
TMEM41B-201ENST00000299596 WDR97A6NE52 1622 aa24.7■■□□□ 1.55
TMEM41B-201ENST00000299596 CHD1O14646 1710 aa24.61■■□□□ 1.53
TMEM41B-201ENST00000299596 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
TMEM41B-201ENST00000299596 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
TMEM41B-201ENST00000299596 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
TMEM41B-201ENST00000299596 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
TMEM41B-201ENST00000299596 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
TMEM41B-201ENST00000299596 CHMP7Q8WUX9 453 aaPredicted RBP24.6■■□□□ 1.53
TMEM41B-201ENST00000299596 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
TMEM41B-201ENST00000299596 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
TMEM41B-201ENST00000299596 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
TMEM41B-201ENST00000299596 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
TMEM41B-201ENST00000299596 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
TMEM41B-201ENST00000299596 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
TMEM41B-201ENST00000299596 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
TMEM41B-201ENST00000299596 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
TMEM41B-201ENST00000299596 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
TMEM41B-201ENST00000299596 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
TMEM41B-201ENST00000299596 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
TMEM41B-201ENST00000299596 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
TMEM41B-201ENST00000299596 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
TMEM41B-201ENST00000299596 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
TMEM41B-201ENST00000299596 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
TMEM41B-201ENST00000299596 GRIN2AQ12879 1464 aa24.27■■□□□ 1.48
TMEM41B-201ENST00000299596 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
TMEM41B-201ENST00000299596 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
TMEM41B-201ENST00000299596 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
TMEM41B-201ENST00000299596 NUP160Q12769 1436 aa24.19■■□□□ 1.46
TMEM41B-201ENST00000299596 TRHP20396 242 aaPredicted RBP24.14■■□□□ 1.45
TMEM41B-201ENST00000299596 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
TMEM41B-201ENST00000299596 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
TMEM41B-201ENST00000299596 IGF1RP08069 1367 aa24.04■■□□□ 1.44
TMEM41B-201ENST00000299596 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
TMEM41B-201ENST00000299596 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
TMEM41B-201ENST00000299596 SHROOM2Q13796 1616 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms