RNA–Protein interactions for RNA: ENST00000444626.5

EWSR1-212, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5

Gene EWSR1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-212ENST00000444626 NISCHQ9Y2I1 1504 aa36.53■■■■□ 3.44
EWSR1-212ENST00000444626 ABCC9O60706 1549 aa33.46■■■□□ 2.95
EWSR1-212ENST00000444626 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
EWSR1-212ENST00000444626 DNAJC5BQ9UF47 199 aa31.81■■■□□ 2.68
EWSR1-212ENST00000444626 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
EWSR1-212ENST00000444626 NACADO15069 1562 aa31.27■■■□□ 2.6
EWSR1-212ENST00000444626 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
EWSR1-212ENST00000444626 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
EWSR1-212ENST00000444626 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
EWSR1-212ENST00000444626 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
EWSR1-212ENST00000444626 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
EWSR1-212ENST00000444626 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
EWSR1-212ENST00000444626 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
EWSR1-212ENST00000444626 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
EWSR1-212ENST00000444626 CC2D2AQ9P2K1 1620 aa30.15■■■□□ 2.42
EWSR1-212ENST00000444626 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
EWSR1-212ENST00000444626 SCRIBQ14160 1630 aa30■■■□□ 2.39
EWSR1-212ENST00000444626 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
EWSR1-212ENST00000444626 DNAJC5Q9H3Z4 198 aa29.56■■■□□ 2.32
EWSR1-212ENST00000444626 CUX2O14529 1486 aa29■■■□□ 2.23
EWSR1-212ENST00000444626 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
EWSR1-212ENST00000444626 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
EWSR1-212ENST00000444626 ATAD2BQ9ULI0 1458 aa28.75■■■□□ 2.19
EWSR1-212ENST00000444626 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
EWSR1-212ENST00000444626 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
EWSR1-212ENST00000444626 NESP48681 1621 aa28.59■■■□□ 2.17
EWSR1-212ENST00000444626 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
EWSR1-212ENST00000444626 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
EWSR1-212ENST00000444626 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
EWSR1-212ENST00000444626 THOC2Q8NI27 1593 aaKnown RBP28.35■■■□□ 2.13
EWSR1-212ENST00000444626 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
EWSR1-212ENST00000444626 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
EWSR1-212ENST00000444626 PDS5BQ9NTI5 1447 aa28.19■■■□□ 2.1
EWSR1-212ENST00000444626 KIF21AQ7Z4S6 1674 aa28.15■■■□□ 2.1
EWSR1-212ENST00000444626 MROH2BQ7Z745 1585 aa28.14■■■□□ 2.1
EWSR1-212ENST00000444626 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
EWSR1-212ENST00000444626 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
EWSR1-212ENST00000444626 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.07
EWSR1-212ENST00000444626 WDR62O43379 1518 aa27.87■■■□□ 2.05
EWSR1-212ENST00000444626 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.03
EWSR1-212ENST00000444626 WIZO95785 1651 aa27.75■■■□□ 2.03
EWSR1-212ENST00000444626 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
EWSR1-212ENST00000444626 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
EWSR1-212ENST00000444626 CFTRP13569 1480 aa27.58■■■□□ 2.01
EWSR1-212ENST00000444626 URB2Q14146 1524 aaKnown RBP27.48■■□□□ 1.99
EWSR1-212ENST00000444626 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
EWSR1-212ENST00000444626 TOP2AP11388 1531 aaKnown RBP27.39■■□□□ 1.98
EWSR1-212ENST00000444626 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
EWSR1-212ENST00000444626 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
EWSR1-212ENST00000444626 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
EWSR1-212ENST00000444626 IFT140Q96RY7 1462 aa27.23■■□□□ 1.95
EWSR1-212ENST00000444626 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
EWSR1-212ENST00000444626 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
EWSR1-212ENST00000444626 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
EWSR1-212ENST00000444626 CCDC88BA6NC98 1476 aa27.11■■□□□ 1.93
EWSR1-212ENST00000444626 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
EWSR1-212ENST00000444626 CYB5RLQ6IPT4 315 aa27.05■■□□□ 1.92
EWSR1-212ENST00000444626 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
EWSR1-212ENST00000444626 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.92
EWSR1-212ENST00000444626 DNMBPQ6XZF7 1577 aa26.95■■□□□ 1.9
EWSR1-212ENST00000444626 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.92e-7■■■■□ 21.3
EWSR1-212ENST00000444626 TRHP20396 242 aaPredicted RBP26.91■■□□□ 1.9
EWSR1-212ENST00000444626 FBLN2P98095 1184 aa26.9■■□□□ 1.9
EWSR1-212ENST00000444626 CHD1O14646 1710 aa26.88■■□□□ 1.89
EWSR1-212ENST00000444626 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
EWSR1-212ENST00000444626 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
EWSR1-212ENST00000444626 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
EWSR1-212ENST00000444626 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
EWSR1-212ENST00000444626 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
EWSR1-212ENST00000444626 SOGA1O94964 1423 aa26.7■■□□□ 1.86
EWSR1-212ENST00000444626 SNAPC4Q5SXM2 1469 aa26.63■■□□□ 1.85
EWSR1-212ENST00000444626 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
EWSR1-212ENST00000444626 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
EWSR1-212ENST00000444626 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
EWSR1-212ENST00000444626 WDR97A6NE52 1622 aa26.55■■□□□ 1.84
EWSR1-212ENST00000444626 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
EWSR1-212ENST00000444626 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
EWSR1-212ENST00000444626 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
EWSR1-212ENST00000444626 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
EWSR1-212ENST00000444626 SYNJ2O15056 1496 aa26.46■■□□□ 1.83
EWSR1-212ENST00000444626 CUX1P39880 1505 aa26.45■■□□□ 1.83
EWSR1-212ENST00000444626 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
EWSR1-212ENST00000444626 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
EWSR1-212ENST00000444626 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
EWSR1-212ENST00000444626 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
EWSR1-212ENST00000444626 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
EWSR1-212ENST00000444626 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
EWSR1-212ENST00000444626 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
EWSR1-212ENST00000444626 NUP160Q12769 1436 aa26.08■■□□□ 1.77
EWSR1-212ENST00000444626 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
EWSR1-212ENST00000444626 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
EWSR1-212ENST00000444626 FHAD1B1AJZ9 1412 aa26.01■■□□□ 1.75
EWSR1-212ENST00000444626 SHROOM2Q13796 1616 aa25.98■■□□□ 1.75
EWSR1-212ENST00000444626 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
EWSR1-212ENST00000444626 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
EWSR1-212ENST00000444626 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
EWSR1-212ENST00000444626 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
EWSR1-212ENST00000444626 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
EWSR1-212ENST00000444626 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
EWSR1-212ENST00000444626 KIF13AQ9H1H9 1805 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms