RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
PDLIM7-214ENST00000505746 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
PDLIM7-214ENST00000505746 ABCC9O60706 1549 aa26.7■■□□□ 1.86
PDLIM7-214ENST00000505746 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.66
PDLIM7-214ENST00000505746 NACADO15069 1562 aa25.32■■□□□ 1.64
PDLIM7-214ENST00000505746 DCAF8L2P0C7V8 631 aa25.3■■□□□ 1.64
PDLIM7-214ENST00000505746 MYO15BQ96JP2 1530 aa25.02■■□□□ 1.6
PDLIM7-214ENST00000505746 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
PDLIM7-214ENST00000505746 PABPN1Q86U42 306 aaKnown RBP eCLIP24.92■■□□□ 1.581e-8■■■■■ 32.2
PDLIM7-214ENST00000505746 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
PDLIM7-214ENST00000505746 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
PDLIM7-214ENST00000505746 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
PDLIM7-214ENST00000505746 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
PDLIM7-214ENST00000505746 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
PDLIM7-214ENST00000505746 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
PDLIM7-214ENST00000505746 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
PDLIM7-214ENST00000505746 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
PDLIM7-214ENST00000505746 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
PDLIM7-214ENST00000505746 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
PDLIM7-214ENST00000505746 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
PDLIM7-214ENST00000505746 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
PDLIM7-214ENST00000505746 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
PDLIM7-214ENST00000505746 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
PDLIM7-214ENST00000505746 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
PDLIM7-214ENST00000505746 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
PDLIM7-214ENST00000505746 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
PDLIM7-214ENST00000505746 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
PDLIM7-214ENST00000505746 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
PDLIM7-214ENST00000505746 CUX2O14529 1486 aa22.99■■□□□ 1.27
PDLIM7-214ENST00000505746 NESP48681 1621 aa22.93■■□□□ 1.26
PDLIM7-214ENST00000505746 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
PDLIM7-214ENST00000505746 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
PDLIM7-214ENST00000505746 PDS5BQ9NTI5 1447 aa22.75■■□□□ 1.23
PDLIM7-214ENST00000505746 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
PDLIM7-214ENST00000505746 WIZO95785 1651 aa22.71■■□□□ 1.23
PDLIM7-214ENST00000505746 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
PDLIM7-214ENST00000505746 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
PDLIM7-214ENST00000505746 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
PDLIM7-214ENST00000505746 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
PDLIM7-214ENST00000505746 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
PDLIM7-214ENST00000505746 CFTRP13569 1480 aa22.45■■□□□ 1.18
PDLIM7-214ENST00000505746 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
PDLIM7-214ENST00000505746 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
PDLIM7-214ENST00000505746 WDR62O43379 1518 aa22.41■■□□□ 1.18
PDLIM7-214ENST00000505746 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
PDLIM7-214ENST00000505746 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
PDLIM7-214ENST00000505746 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
PDLIM7-214ENST00000505746 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
PDLIM7-214ENST00000505746 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
PDLIM7-214ENST00000505746 IFT140Q96RY7 1462 aa22■■□□□ 1.11
PDLIM7-214ENST00000505746 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
PDLIM7-214ENST00000505746 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
PDLIM7-214ENST00000505746 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
PDLIM7-214ENST00000505746 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
PDLIM7-214ENST00000505746 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-214ENST00000505746 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-214ENST00000505746 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.072e-9■■■■■ 47.9
PDLIM7-214ENST00000505746 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-214ENST00000505746 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-214ENST00000505746 SOGA1O94964 1423 aa21.73■■□□□ 1.07
PDLIM7-214ENST00000505746 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
PDLIM7-214ENST00000505746 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-214ENST00000505746 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
PDLIM7-214ENST00000505746 FBLN2P98095 1184 aa21.65■■□□□ 1.06
PDLIM7-214ENST00000505746 CUX1P39880 1505 aa21.63■■□□□ 1.05
PDLIM7-214ENST00000505746 RIMBP3CA6NJZ7 1639 aa21.59■■□□□ 1.05
PDLIM7-214ENST00000505746 RIMBP3BA6NNM3 1639 aa21.59■■□□□ 1.05
PDLIM7-214ENST00000505746 RIMBP3Q9UFD9 1639 aa21.59■■□□□ 1.05
PDLIM7-214ENST00000505746 WDR97A6NE52 1622 aa21.58■■□□□ 1.04
PDLIM7-214ENST00000505746 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
PDLIM7-214ENST00000505746 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-214ENST00000505746 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
PDLIM7-214ENST00000505746 CHD1O14646 1710 aa21.52■■□□□ 1.03
PDLIM7-214ENST00000505746 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
PDLIM7-214ENST00000505746 CYB5RLQ6IPT4 315 aa21.49■■□□□ 1.03
PDLIM7-214ENST00000505746 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-214ENST00000505746 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
PDLIM7-214ENST00000505746 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
PDLIM7-214ENST00000505746 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
PDLIM7-214ENST00000505746 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
PDLIM7-214ENST00000505746 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
PDLIM7-214ENST00000505746 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
PDLIM7-214ENST00000505746 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
PDLIM7-214ENST00000505746 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
PDLIM7-214ENST00000505746 TOP2BQ02880 1626 aa21.31■■□□□ 1
PDLIM7-214ENST00000505746 PBRM1Q86U86 1689 aa21.31■■□□□ 1
PDLIM7-214ENST00000505746 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
PDLIM7-214ENST00000505746 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-214ENST00000505746 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
PDLIM7-214ENST00000505746 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
PDLIM7-214ENST00000505746 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
PDLIM7-214ENST00000505746 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
PDLIM7-214ENST00000505746 NUP160Q12769 1436 aa21.14■□□□□ 0.98
PDLIM7-214ENST00000505746 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
PDLIM7-214ENST00000505746 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
PDLIM7-214ENST00000505746 JPH4Q96JJ6 628 aa20.99■□□□□ 0.95
PDLIM7-214ENST00000505746 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
PDLIM7-214ENST00000505746 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
PDLIM7-214ENST00000505746 IGF1RP08069 1367 aa20.96■□□□□ 0.95
PDLIM7-214ENST00000505746 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms