RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
SYPL1-202ENST00000455385 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.16
SYPL1-202ENST00000455385 ABCC9O60706 1549 aa21.59■■□□□ 1.05
SYPL1-202ENST00000455385 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
SYPL1-202ENST00000455385 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
SYPL1-202ENST00000455385 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
SYPL1-202ENST00000455385 NACADO15069 1562 aa20.93■□□□□ 0.94
SYPL1-202ENST00000455385 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
SYPL1-202ENST00000455385 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
SYPL1-202ENST00000455385 SCRIBQ14160 1630 aa20.48■□□□□ 0.87
SYPL1-202ENST00000455385 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
SYPL1-202ENST00000455385 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
SYPL1-202ENST00000455385 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
SYPL1-202ENST00000455385 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
SYPL1-202ENST00000455385 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
SYPL1-202ENST00000455385 EIF4G1Q04637 1599 aaKnown RBP19.68■□□□□ 0.74
SYPL1-202ENST00000455385 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
SYPL1-202ENST00000455385 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
SYPL1-202ENST00000455385 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
SYPL1-202ENST00000455385 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
SYPL1-202ENST00000455385 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
SYPL1-202ENST00000455385 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.72
SYPL1-202ENST00000455385 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
SYPL1-202ENST00000455385 WIZO95785 1651 aa19.41■□□□□ 0.7
SYPL1-202ENST00000455385 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.7
SYPL1-202ENST00000455385 SUPT5HO00267 1087 aaKnown RBP19.37■□□□□ 0.69
SYPL1-202ENST00000455385 SMARCA2P51531 1590 aa19.37■□□□□ 0.69
SYPL1-202ENST00000455385 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
SYPL1-202ENST00000455385 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
SYPL1-202ENST00000455385 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
SYPL1-202ENST00000455385 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
SYPL1-202ENST00000455385 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
SYPL1-202ENST00000455385 NESP48681 1621 aa18.82■□□□□ 0.6
SYPL1-202ENST00000455385 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
SYPL1-202ENST00000455385 CFTRP13569 1480 aa18.78■□□□□ 0.6
SYPL1-202ENST00000455385 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
SYPL1-202ENST00000455385 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
SYPL1-202ENST00000455385 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
SYPL1-202ENST00000455385 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
SYPL1-202ENST00000455385 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
SYPL1-202ENST00000455385 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
SYPL1-202ENST00000455385 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
SYPL1-202ENST00000455385 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
SYPL1-202ENST00000455385 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
SYPL1-202ENST00000455385 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
SYPL1-202ENST00000455385 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
SYPL1-202ENST00000455385 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
SYPL1-202ENST00000455385 CUX1P39880 1505 aa18.36■□□□□ 0.53
SYPL1-202ENST00000455385 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
SYPL1-202ENST00000455385 WDR62O43379 1518 aa18.33■□□□□ 0.52
SYPL1-202ENST00000455385 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
SYPL1-202ENST00000455385 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
SYPL1-202ENST00000455385 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
SYPL1-202ENST00000455385 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
SYPL1-202ENST00000455385 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
SYPL1-202ENST00000455385 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
SYPL1-202ENST00000455385 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
SYPL1-202ENST00000455385 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
SYPL1-202ENST00000455385 CUX2O14529 1486 aa18.2■□□□□ 0.5
SYPL1-202ENST00000455385 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
SYPL1-202ENST00000455385 SOGA1O94964 1423 aa18.16■□□□□ 0.5
SYPL1-202ENST00000455385 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
SYPL1-202ENST00000455385 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
SYPL1-202ENST00000455385 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
SYPL1-202ENST00000455385 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
SYPL1-202ENST00000455385 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
SYPL1-202ENST00000455385 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
SYPL1-202ENST00000455385 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■□□ 14.8
SYPL1-202ENST00000455385 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
SYPL1-202ENST00000455385 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
SYPL1-202ENST00000455385 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
SYPL1-202ENST00000455385 GAPVD1Q14C86 1478 aa17.94■□□□□ 0.46
SYPL1-202ENST00000455385 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
SYPL1-202ENST00000455385 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
SYPL1-202ENST00000455385 IGF1RP08069 1367 aa17.88■□□□□ 0.45
SYPL1-202ENST00000455385 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
SYPL1-202ENST00000455385 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
SYPL1-202ENST00000455385 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.45
SYPL1-202ENST00000455385 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.44
SYPL1-202ENST00000455385 EEA1Q15075 1411 aa17.82■□□□□ 0.44
SYPL1-202ENST00000455385 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
SYPL1-202ENST00000455385 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.43
SYPL1-202ENST00000455385 CARMIL1Q5VZK9 1371 aa17.76■□□□□ 0.43
SYPL1-202ENST00000455385 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
SYPL1-202ENST00000455385 ADAMTS12P58397 1594 aa17.72■□□□□ 0.43
SYPL1-202ENST00000455385 FBLN2P98095 1184 aa17.72■□□□□ 0.43
SYPL1-202ENST00000455385 PRXQ9BXM0 1461 aa17.72■□□□□ 0.43
SYPL1-202ENST00000455385 CUL7Q14999 1698 aa17.71■□□□□ 0.43
SYPL1-202ENST00000455385 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
SYPL1-202ENST00000455385 SYNJ2O15056 1496 aa17.7■□□□□ 0.42
SYPL1-202ENST00000455385 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
SYPL1-202ENST00000455385 RAPGEF2Q9Y4G8 1499 aa17.67■□□□□ 0.42
SYPL1-202ENST00000455385 GRIN2AQ12879 1464 aa17.64■□□□□ 0.42
SYPL1-202ENST00000455385 CHD1O14646 1710 aa17.64■□□□□ 0.41
SYPL1-202ENST00000455385 KIF21BO75037 1637 aa17.62■□□□□ 0.41
SYPL1-202ENST00000455385 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
SYPL1-202ENST00000455385 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
SYPL1-202ENST00000455385 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
SYPL1-202ENST00000455385 NUP160Q12769 1436 aa17.56■□□□□ 0.4
SYPL1-202ENST00000455385 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms