RNA–Protein interactions for RNA: ENST00000437155.6

EWSR1-211, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5

Gene EWSR1, Length 933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-211ENST00000437155 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
EWSR1-211ENST00000437155 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
EWSR1-211ENST00000437155 ABCC9O60706 1549 aa19.12■□□□□ 0.65
EWSR1-211ENST00000437155 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
EWSR1-211ENST00000437155 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
EWSR1-211ENST00000437155 NACADO15069 1562 aa18.38■□□□□ 0.53
EWSR1-211ENST00000437155 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
EWSR1-211ENST00000437155 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
EWSR1-211ENST00000437155 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
EWSR1-211ENST00000437155 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
EWSR1-211ENST00000437155 SCRIBQ14160 1630 aa17.83■□□□□ 0.44
EWSR1-211ENST00000437155 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
EWSR1-211ENST00000437155 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
EWSR1-211ENST00000437155 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
EWSR1-211ENST00000437155 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
EWSR1-211ENST00000437155 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
EWSR1-211ENST00000437155 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
EWSR1-211ENST00000437155 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
EWSR1-211ENST00000437155 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
EWSR1-211ENST00000437155 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
EWSR1-211ENST00000437155 NCAPD3P42695 1498 aa17.06■□□□□ 0.32
EWSR1-211ENST00000437155 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
EWSR1-211ENST00000437155 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
EWSR1-211ENST00000437155 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
EWSR1-211ENST00000437155 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
EWSR1-211ENST00000437155 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
EWSR1-211ENST00000437155 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.3
EWSR1-211ENST00000437155 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
EWSR1-211ENST00000437155 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
EWSR1-211ENST00000437155 WIZO95785 1651 aa16.76■□□□□ 0.27
EWSR1-211ENST00000437155 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
EWSR1-211ENST00000437155 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
EWSR1-211ENST00000437155 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
EWSR1-211ENST00000437155 NESP48681 1621 aa16.56■□□□□ 0.24
EWSR1-211ENST00000437155 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
EWSR1-211ENST00000437155 CFTRP13569 1480 aa16.48■□□□□ 0.23
EWSR1-211ENST00000437155 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
EWSR1-211ENST00000437155 LAMC3Q9Y6N6 1575 aa16.45■□□□□ 0.22
EWSR1-211ENST00000437155 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
EWSR1-211ENST00000437155 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
EWSR1-211ENST00000437155 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
EWSR1-211ENST00000437155 CUX2O14529 1486 aa16.22■□□□□ 0.19
EWSR1-211ENST00000437155 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.18
EWSR1-211ENST00000437155 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
EWSR1-211ENST00000437155 WDR62O43379 1518 aa16.12■□□□□ 0.17
EWSR1-211ENST00000437155 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
EWSR1-211ENST00000437155 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
EWSR1-211ENST00000437155 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
EWSR1-211ENST00000437155 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
EWSR1-211ENST00000437155 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
EWSR1-211ENST00000437155 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
EWSR1-211ENST00000437155 SOGA1O94964 1423 aa15.99■□□□□ 0.15
EWSR1-211ENST00000437155 IFT140Q96RY7 1462 aa15.98■□□□□ 0.15
EWSR1-211ENST00000437155 CUX1P39880 1505 aa15.98■□□□□ 0.15
EWSR1-211ENST00000437155 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.14
EWSR1-211ENST00000437155 PRDM2Q13029 1718 aa15.95■□□□□ 0.14
EWSR1-211ENST00000437155 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
EWSR1-211ENST00000437155 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
EWSR1-211ENST00000437155 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
EWSR1-211ENST00000437155 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
EWSR1-211ENST00000437155 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.132e-7■■■■□ 21.3
EWSR1-211ENST00000437155 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
EWSR1-211ENST00000437155 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
EWSR1-211ENST00000437155 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
EWSR1-211ENST00000437155 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
EWSR1-211ENST00000437155 TARBP1Q13395 1621 aaKnown RBP15.78■□□□□ 0.12
EWSR1-211ENST00000437155 FBLN2P98095 1184 aa15.75■□□□□ 0.11
EWSR1-211ENST00000437155 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
EWSR1-211ENST00000437155 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
EWSR1-211ENST00000437155 GRIN2BQ13224 1484 aa15.73■□□□□ 0.11
EWSR1-211ENST00000437155 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
EWSR1-211ENST00000437155 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
EWSR1-211ENST00000437155 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
EWSR1-211ENST00000437155 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
EWSR1-211ENST00000437155 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
EWSR1-211ENST00000437155 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
EWSR1-211ENST00000437155 IGF1RP08069 1367 aa15.66■□□□□ 0.1
EWSR1-211ENST00000437155 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
EWSR1-211ENST00000437155 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
EWSR1-211ENST00000437155 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
EWSR1-211ENST00000437155 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
EWSR1-211ENST00000437155 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
EWSR1-211ENST00000437155 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
EWSR1-211ENST00000437155 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
EWSR1-211ENST00000437155 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
EWSR1-211ENST00000437155 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
EWSR1-211ENST00000437155 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
EWSR1-211ENST00000437155 GRIN2AQ12879 1464 aa15.49■□□□□ 0.07
EWSR1-211ENST00000437155 EEA1Q15075 1411 aa15.46■□□□□ 0.07
EWSR1-211ENST00000437155 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
EWSR1-211ENST00000437155 NUP160Q12769 1436 aa15.44■□□□□ 0.06
EWSR1-211ENST00000437155 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
EWSR1-211ENST00000437155 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
EWSR1-211ENST00000437155 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
EWSR1-211ENST00000437155 PRXQ9BXM0 1461 aa15.39■□□□□ 0.05
EWSR1-211ENST00000437155 KIAA0586Q9BVV6 1533 aa15.35■□□□□ 0.05
EWSR1-211ENST00000437155 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
EWSR1-211ENST00000437155 CHD1O14646 1710 aa15.34■□□□□ 0.05
EWSR1-211ENST00000437155 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
EWSR1-211ENST00000437155 CUL7Q14999 1698 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms