RNA–Protein interactions for RNA: ENST00000524543.5

TMEM41B-202, Transcript of transmembrane protein 41B, humanhuman

TSL 2

Gene TMEM41B, Length 3,848 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-202ENST00000524543 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
TMEM41B-202ENST00000524543 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
TMEM41B-202ENST00000524543 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
TMEM41B-202ENST00000524543 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
TMEM41B-202ENST00000524543 HRCP23327 699 aa19.78■□□□□ 0.76
TMEM41B-202ENST00000524543 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
TMEM41B-202ENST00000524543 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
TMEM41B-202ENST00000524543 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
TMEM41B-202ENST00000524543 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
TMEM41B-202ENST00000524543 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
TMEM41B-202ENST00000524543 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
TMEM41B-202ENST00000524543 NACADO15069 1562 aa19.07■□□□□ 0.64
TMEM41B-202ENST00000524543 ABCC9O60706 1549 aa18.91■□□□□ 0.62
TMEM41B-202ENST00000524543 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
TMEM41B-202ENST00000524543 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
TMEM41B-202ENST00000524543 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
TMEM41B-202ENST00000524543 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
TMEM41B-202ENST00000524543 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
TMEM41B-202ENST00000524543 MYT1Q01538 1121 aa18.74■□□□□ 0.59
TMEM41B-202ENST00000524543 TRIM26Q12899 539 aaPredicted RBP18.65■□□□□ 0.58
TMEM41B-202ENST00000524543 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
TMEM41B-202ENST00000524543 ZEB1P37275 1124 aaPredicted RBP18.6■□□□□ 0.57
TMEM41B-202ENST00000524543 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
TMEM41B-202ENST00000524543 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.56
TMEM41B-202ENST00000524543 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
TMEM41B-202ENST00000524543 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
TMEM41B-202ENST00000524543 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.53
TMEM41B-202ENST00000524543 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
TMEM41B-202ENST00000524543 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
TMEM41B-202ENST00000524543 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
TMEM41B-202ENST00000524543 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.51
TMEM41B-202ENST00000524543 WIZO95785 1651 aa18.22■□□□□ 0.51
TMEM41B-202ENST00000524543 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
TMEM41B-202ENST00000524543 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.51
TMEM41B-202ENST00000524543 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
TMEM41B-202ENST00000524543 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
TMEM41B-202ENST00000524543 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.49
TMEM41B-202ENST00000524543 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
TMEM41B-202ENST00000524543 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
TMEM41B-202ENST00000524543 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
TMEM41B-202ENST00000524543 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
TMEM41B-202ENST00000524543 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
TMEM41B-202ENST00000524543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
TMEM41B-202ENST00000524543 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
TMEM41B-202ENST00000524543 TRIM41Q8WV44 630 aa17.82■□□□□ 0.44
TMEM41B-202ENST00000524543 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
TMEM41B-202ENST00000524543 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
TMEM41B-202ENST00000524543 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
TMEM41B-202ENST00000524543 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.423e-6■■□□□ 12.4
TMEM41B-202ENST00000524543 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
TMEM41B-202ENST00000524543 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
TMEM41B-202ENST00000524543 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
TMEM41B-202ENST00000524543 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
TMEM41B-202ENST00000524543 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
TMEM41B-202ENST00000524543 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
TMEM41B-202ENST00000524543 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
TMEM41B-202ENST00000524543 MIER1Q8N108 512 aa17.47■□□□□ 0.39
TMEM41B-202ENST00000524543 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
TMEM41B-202ENST00000524543 ANP32EQ9BTT0 268 aa17.4■□□□□ 0.38
TMEM41B-202ENST00000524543 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
TMEM41B-202ENST00000524543 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
TMEM41B-202ENST00000524543 EEA1Q15075 1411 aa17.35■□□□□ 0.37
TMEM41B-202ENST00000524543 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
TMEM41B-202ENST00000524543 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
TMEM41B-202ENST00000524543 CFTRP13569 1480 aa17.29■□□□□ 0.36
TMEM41B-202ENST00000524543 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
TMEM41B-202ENST00000524543 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
TMEM41B-202ENST00000524543 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
TMEM41B-202ENST00000524543 KIF21BO75037 1637 aa17.23■□□□□ 0.35
TMEM41B-202ENST00000524543 SOGA1O94964 1423 aa17.23■□□□□ 0.35
TMEM41B-202ENST00000524543 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
TMEM41B-202ENST00000524543 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
TMEM41B-202ENST00000524543 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
TMEM41B-202ENST00000524543 CUX1P39880 1505 aa17.14■□□□□ 0.33
TMEM41B-202ENST00000524543 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
TMEM41B-202ENST00000524543 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
TMEM41B-202ENST00000524543 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
TMEM41B-202ENST00000524543 BCANQ96GW7 911 aa17.06■□□□□ 0.32
TMEM41B-202ENST00000524543 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
TMEM41B-202ENST00000524543 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
TMEM41B-202ENST00000524543 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
TMEM41B-202ENST00000524543 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
TMEM41B-202ENST00000524543 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
TMEM41B-202ENST00000524543 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
TMEM41B-202ENST00000524543 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
TMEM41B-202ENST00000524543 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
TMEM41B-202ENST00000524543 FKBP8Q14318 412 aa16.88■□□□□ 0.29
TMEM41B-202ENST00000524543 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
TMEM41B-202ENST00000524543 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
TMEM41B-202ENST00000524543 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
TMEM41B-202ENST00000524543 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
TMEM41B-202ENST00000524543 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
TMEM41B-202ENST00000524543 NEFLP07196 543 aa16.83■□□□□ 0.28
TMEM41B-202ENST00000524543 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
TMEM41B-202ENST00000524543 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
TMEM41B-202ENST00000524543 APLP2Q06481 763 aa16.79■□□□□ 0.28
TMEM41B-202ENST00000524543 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
TMEM41B-202ENST00000524543 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.27
TMEM41B-202ENST00000524543 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
TMEM41B-202ENST00000524543 ITGAEP38570 1179 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms