Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
LAMB4A4D0S4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.6■■■□□ 2.65
LAMB4A4D0S4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
LAMB4A4D0S4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.6■■■□□ 2.65
LAMB4A4D0S4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.6■■■□□ 2.65
LAMB4A4D0S4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LAMB4A4D0S4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LAMB4A4D0S4 LINC01003-201ENST00000564834 1764 ntBASIC31.59■■■□□ 2.65
LAMB4A4D0S4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.58■■■□□ 2.65
LAMB4A4D0S4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
LAMB4A4D0S4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
LAMB4A4D0S4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
LAMB4A4D0S4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.57■■■□□ 2.64
LAMB4A4D0S4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
LAMB4A4D0S4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
LAMB4A4D0S4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.57■■■□□ 2.64
LAMB4A4D0S4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.56■■■□□ 2.64
LAMB4A4D0S4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
LAMB4A4D0S4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
LAMB4A4D0S4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
LAMB4A4D0S4 MIR6765-201ENST00000614092 87 ntBASIC31.55■■■□□ 2.64
LAMB4A4D0S4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
LAMB4A4D0S4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB4A4D0S4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB4A4D0S4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB4A4D0S4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB4A4D0S4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB4A4D0S4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.53■■■□□ 2.64
LAMB4A4D0S4 DUX4L18-201ENST00000553347 1267 ntBASIC31.53■■■□□ 2.64
LAMB4A4D0S4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.53■■■□□ 2.64
LAMB4A4D0S4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LAMB4A4D0S4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.52■■■□□ 2.64
LAMB4A4D0S4 AL449106.1-201ENST00000608517 1980 ntBASIC31.52■■■□□ 2.64
LAMB4A4D0S4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.52■■■□□ 2.64
LAMB4A4D0S4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LAMB4A4D0S4 AL451085.2-201ENST00000605085 799 ntBASIC31.52■■■□□ 2.64
LAMB4A4D0S4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
LAMB4A4D0S4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LAMB4A4D0S4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
LAMB4A4D0S4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.51■■■□□ 2.64
LAMB4A4D0S4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.51■■■□□ 2.64
LAMB4A4D0S4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
LAMB4A4D0S4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
LAMB4A4D0S4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.51■■■□□ 2.63
LAMB4A4D0S4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LAMB4A4D0S4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LAMB4A4D0S4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LAMB4A4D0S4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LAMB4A4D0S4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LAMB4A4D0S4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
LAMB4A4D0S4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
LAMB4A4D0S4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LAMB4A4D0S4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
LAMB4A4D0S4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
LAMB4A4D0S4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.46■■■□□ 2.63
LAMB4A4D0S4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
LAMB4A4D0S4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
LAMB4A4D0S4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.45■■■□□ 2.62
LAMB4A4D0S4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
LAMB4A4D0S4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.44■■■□□ 2.62
LAMB4A4D0S4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.44■■■□□ 2.62
LAMB4A4D0S4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.44■■■□□ 2.62
LAMB4A4D0S4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.44■■■□□ 2.62
LAMB4A4D0S4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LAMB4A4D0S4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
LAMB4A4D0S4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
LAMB4A4D0S4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.43■■■□□ 2.62
LAMB4A4D0S4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.42■■■□□ 2.62
LAMB4A4D0S4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.42■■■□□ 2.62
LAMB4A4D0S4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
LAMB4A4D0S4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LAMB4A4D0S4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.41■■■□□ 2.62
LAMB4A4D0S4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.41■■■□□ 2.62
LAMB4A4D0S4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LAMB4A4D0S4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LAMB4A4D0S4 AC139426.1-201ENST00000568218 2529 ntBASIC31.41■■■□□ 2.62
LAMB4A4D0S4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LAMB4A4D0S4 PVT1_1.1-201ENST00000615125 194 ntBASIC31.4■■■□□ 2.62
LAMB4A4D0S4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LAMB4A4D0S4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.4■■■□□ 2.62
LAMB4A4D0S4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
LAMB4A4D0S4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
LAMB4A4D0S4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
LAMB4A4D0S4 AC139795.1-202ENST00000500444 432 ntBASIC31.39■■■□□ 2.62
LAMB4A4D0S4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
LAMB4A4D0S4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LAMB4A4D0S4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.38■■■□□ 2.61
LAMB4A4D0S4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
LAMB4A4D0S4 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.37■■■□□ 2.61
LAMB4A4D0S4 MIR4508-201ENST00000584178 70 ntBASIC31.37■■■□□ 2.61
LAMB4A4D0S4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LAMB4A4D0S4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LAMB4A4D0S4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.35■■■□□ 2.61
LAMB4A4D0S4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms