Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 OS9-212ENST00000550202 787 ntTSL 213.33□□□□□ -0.282e-8■□□□□ 11
LARP4Q71RC2 OS9-209ENST00000547079 583 ntTSL 310.42□□□□□ -0.742e-8■□□□□ 11
LARP4Q71RC2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.06■□□□□ 0.81e-7■□□□□ 11
LARP4Q71RC2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.741e-7■□□□□ 11
LARP4Q71RC2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.44□□□□□ -0.11e-7■□□□□ 11
LARP4Q71RC2 SUMO3-206ENST00000479153 1736 ntTSL 212.39□□□□□ -0.431e-7■□□□□ 11
LARP4Q71RC2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.477e-7■□□□□ 11
LARP4Q71RC2 ITGB5-202ENST00000460797 2228 ntTSL 212.32□□□□□ -0.447e-7■□□□□ 11
LARP4Q71RC2 NDUFS8-207ENST00000526339 689 ntTSL 212.38□□□□□ -0.431e-6■□□□□ 11
LARP4Q71RC2 RPL8-214ENST00000534781 716 ntTSL 213.06□□□□□ -0.321e-10■□□□□ 11
LARP4Q71RC2 DBI-207ENST00000492375 784 ntTSL 28.17□□□□□ -1.13e-11■□□□□ 10.9
LARP4Q71RC2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.86■□□□□ 0.932e-8■□□□□ 10.9
LARP4Q71RC2 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.962e-8■□□□□ 10.9
LARP4Q71RC2 EPN1-206ENST00000589704 250 ntTSL 56.66□□□□□ -1.342e-8■□□□□ 10.9
LARP4Q71RC2 RPS15-211ENST00000592700 1602 ntTSL 220.06■□□□□ 0.82e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.72e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.632e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.84■□□□□ 0.452e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.9■□□□□ 0.142e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.9■□□□□ 0.142e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.52□□□□□ -0.092e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.36□□□□□ -0.112e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.36□□□□□ -0.112e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.36□□□□□ -0.112e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.112e-15■□□□□ 10.9
LARP4Q71RC2 RPS15-204ENST00000586656 436 ntTSL 313.79□□□□□ -0.22e-15■□□□□ 10.9
LARP4Q71RC2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.022e-29■□□□□ 10.9
LARP4Q71RC2 RPS11-206ENST00000600027 944 ntTSL 511.48□□□□□ -0.571e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-204ENST00000599167 1133 ntTSL 511.48□□□□□ -0.571e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.051e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.93□□□□□ -1.141e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-209ENST00000602252 751 ntTSL 27.93□□□□□ -1.141e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-208ENST00000601306 547 ntTSL 37.4□□□□□ -1.221e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.2□□□□□ -1.421e-27■□□□□ 10.9
LARP4Q71RC2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.924e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.55■■□□□ 1.046e-12■□□□□ 10.9
LARP4Q71RC2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.33■□□□□ 0.856e-12■□□□□ 10.9
LARP4Q71RC2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.32e-6■□□□□ 10.9
LARP4Q71RC2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.142e-6■□□□□ 10.9
LARP4Q71RC2 SHC2-206ENST00000590222 951 ntTSL 515.52■□□□□ 0.084e-7■□□□□ 10.9
LARP4Q71RC2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.693e-7■□□□□ 10.9
LARP4Q71RC2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.04■■□□□ 1.283e-7■□□□□ 10.9
LARP4Q71RC2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.86■□□□□ 0.613e-7■□□□□ 10.9
LARP4Q71RC2 BTBD2-210ENST00000592895 2763 ntTSL 218.69■□□□□ 0.583e-7■□□□□ 10.9
LARP4Q71RC2 BTBD2-207ENST00000589685 2422 ntTSL 1 (best)18.18■□□□□ 0.53e-7■□□□□ 10.9
LARP4Q71RC2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.463e-7■□□□□ 10.9
LARP4Q71RC2 POLR2I-204ENST00000586789 993 ntTSL 517.73■□□□□ 0.433e-7■□□□□ 10.9
LARP4Q71RC2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.383e-7■□□□□ 10.9
LARP4Q71RC2 POLR2I-203ENST00000586439 744 ntTSL 517.29■□□□□ 0.363e-7■□□□□ 10.9
LARP4Q71RC2 DBN1-206ENST00000472831 2667 ntTSL 216.43■□□□□ 0.223e-7■□□□□ 10.9
LARP4Q71RC2 NXN-206ENST00000571684 1159 ntTSL 316.08■□□□□ 0.163e-7■□□□□ 10.9
LARP4Q71RC2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.133e-7■□□□□ 10.9
LARP4Q71RC2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.45■□□□□ 0.063e-7■□□□□ 10.9
LARP4Q71RC2 PACSIN3-210ENST00000533686 443 ntTSL 315.42■□□□□ 0.063e-7■□□□□ 10.9
LARP4Q71RC2 HLA-H-201ENST00000383620 1096 ntBASIC15.19■□□□□ 0.023e-7■□□□□ 10.9
LARP4Q71RC2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.083e-7■□□□□ 10.9
LARP4Q71RC2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.123e-7■□□□□ 10.9
LARP4Q71RC2 SORBS3-211ENST00000521554 858 ntTSL 214.23□□□□□ -0.133e-7■□□□□ 10.9
LARP4Q71RC2 TSN-211ENST00000498545 1118 ntTSL 1 (best)14.07□□□□□ -0.163e-7■□□□□ 10.9
LARP4Q71RC2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.89□□□□□ -0.193e-7■□□□□ 10.9
LARP4Q71RC2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.23e-7■□□□□ 10.9
LARP4Q71RC2 CANT1-214ENST00000592228 1546 ntTSL 513.74□□□□□ -0.213e-7■□□□□ 10.9
LARP4Q71RC2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.72□□□□□ -0.213e-7■□□□□ 10.9
LARP4Q71RC2 ANPEP-209ENST00000560137 638 ntTSL 313.59□□□□□ -0.233e-7■□□□□ 10.9
LARP4Q71RC2 NXN-204ENST00000571281 1047 ntTSL 1 (best)13.46□□□□□ -0.253e-7■□□□□ 10.9
LARP4Q71RC2 TSN-208ENST00000490104 2717 ntTSL 213.44□□□□□ -0.263e-7■□□□□ 10.9
LARP4Q71RC2 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.313e-7■□□□□ 10.9
LARP4Q71RC2 HEXA-208ENST00000567027 1353 ntTSL 212.82□□□□□ -0.367e-7■□□□□ 10.9
LARP4Q71RC2 TSN-204ENST00000467324 2843 ntTSL 512.76□□□□□ -0.373e-7■□□□□ 10.9
LARP4Q71RC2 POLR2I-206ENST00000589591 542 ntTSL 212.39□□□□□ -0.433e-7■□□□□ 10.9
LARP4Q71RC2 ARL2-202ENST00000524585 1228 ntTSL 212.01□□□□□ -0.493e-7■□□□□ 10.9
LARP4Q71RC2 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.496e-12■□□□□ 10.9
LARP4Q71RC2 SORBS3-216ENST00000523348 680 ntTSL 211.89□□□□□ -0.513e-7■□□□□ 10.9
LARP4Q71RC2 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.533e-7■□□□□ 10.9
LARP4Q71RC2 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.533e-7■□□□□ 10.9
LARP4Q71RC2 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.583e-7■□□□□ 10.9
LARP4Q71RC2 POLR2I-202ENST00000585842 368 ntTSL 211.43□□□□□ -0.583e-7■□□□□ 10.9
LARP4Q71RC2 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.613e-7■□□□□ 10.9
LARP4Q71RC2 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.627e-7■□□□□ 10.9
LARP4Q71RC2 TSN-202ENST00000409193 1436 ntTSL 5 BASIC11.03□□□□□ -0.643e-7■□□□□ 10.9
LARP4Q71RC2 CDCA3-206ENST00000536241 1490 ntTSL 511□□□□□ -0.653e-7■□□□□ 10.9
LARP4Q71RC2 POLR2I-207ENST00000592962 493 ntTSL 210.81□□□□□ -0.683e-7■□□□□ 10.9
LARP4Q71RC2 CDCA3-201ENST00000229265 1047 ntTSL 2 BASIC10.51□□□□□ -0.733e-7■□□□□ 10.9
LARP4Q71RC2 SAA4-201ENST00000278222 727 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.766e-12■□□□□ 10.9
LARP4Q71RC2 CDCA3-208ENST00000540683 985 ntTSL 2 BASIC9.5□□□□□ -0.893e-7■□□□□ 10.9
LARP4Q71RC2 ANPEP-205ENST00000559874 663 ntTSL 38.94□□□□□ -0.983e-7■□□□□ 10.9
LARP4Q71RC2 CDCA3-204ENST00000535406 1327 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.033e-7■□□□□ 10.9
LARP4Q71RC2 HEXA-213ENST00000568777 6909 ntTSL 57.89□□□□□ -1.157e-7■□□□□ 10.9
LARP4Q71RC2 NXN-207ENST00000574018 508 ntTSL 37.58□□□□□ -1.23e-7■□□□□ 10.9
LARP4Q71RC2 CDCA3-209ENST00000544610 624 ntTSL 36.26□□□□□ -1.413e-7■□□□□ 10.9
LARP4Q71RC2 ATPAF1-208ENST00000526821 1222 ntTSL 35.99□□□□□ -1.453e-7■□□□□ 10.9
LARP4Q71RC2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.21□□□□□ -1.583e-7■□□□□ 10.9
LARP4Q71RC2 SUB1-208ENST00000511175 636 ntTSL 24.79□□□□□ -1.646e-12■□□□□ 10.9
LARP4Q71RC2 SUB1-212ENST00000513013 493 ntTSL 54.1□□□□□ -1.756e-12■□□□□ 10.9
LARP4Q71RC2 ATPAF1-206ENST00000492233 429 ntTSL 33.66□□□□□ -1.823e-7■□□□□ 10.9
LARP4Q71RC2 SUB1-202ENST00000502453 4273 ntTSL 1 (best)3.57□□□□□ -1.846e-12■□□□□ 10.9
LARP4Q71RC2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.579e-8■□□□□ 10.9
LARP4Q71RC2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.399e-8■□□□□ 10.9
LARP4Q71RC2 MCRIP2-202ENST00000474840 702 ntTSL 1 (best)24.32■■□□□ 1.481e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP2-203ENST00000491999 1050 ntTSL 521.95■■□□□ 1.11e-7■□□□□ 10.9
Retrieved 100 of 15,922 protein–RNA pairs in 337.5 ms