RNA–Protein interactions for RNA: ENST00000221859.8

POLR2I-201, Transcript of RNA polymerase II subunit I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2I, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2I-201ENST00000221859 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
POLR2I-201ENST00000221859 ABCC9O60706 1549 aa34.5■■■■□ 3.11
POLR2I-201ENST00000221859 DNAJC5BQ9UF47 199 aa33.42■■■□□ 2.94
POLR2I-201ENST00000221859 CCDC180Q9P1Z9 1646 aa33.4■■■□□ 2.94
POLR2I-201ENST00000221859 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
POLR2I-201ENST00000221859 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
POLR2I-201ENST00000221859 NACADO15069 1562 aa31.9■■■□□ 2.7
POLR2I-201ENST00000221859 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
POLR2I-201ENST00000221859 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
POLR2I-201ENST00000221859 BICRAQ9NZM4 1560 aa31.45■■■□□ 2.63
POLR2I-201ENST00000221859 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
POLR2I-201ENST00000221859 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
POLR2I-201ENST00000221859 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
POLR2I-201ENST00000221859 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
POLR2I-201ENST00000221859 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
POLR2I-201ENST00000221859 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
POLR2I-201ENST00000221859 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
POLR2I-201ENST00000221859 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
POLR2I-201ENST00000221859 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
POLR2I-201ENST00000221859 CUX2O14529 1486 aa30.29■■■□□ 2.44
POLR2I-201ENST00000221859 ERCC6Q03468 1493 aa29.89■■■□□ 2.38
POLR2I-201ENST00000221859 TRIM41Q8WV44 630 aa29.62■■■□□ 2.33
POLR2I-201ENST00000221859 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
POLR2I-201ENST00000221859 NESP48681 1621 aa29.3■■■□□ 2.28
POLR2I-201ENST00000221859 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
POLR2I-201ENST00000221859 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
POLR2I-201ENST00000221859 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
POLR2I-201ENST00000221859 SMARCA2P51531 1590 aa29.06■■■□□ 2.24
POLR2I-201ENST00000221859 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
POLR2I-201ENST00000221859 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
POLR2I-201ENST00000221859 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
POLR2I-201ENST00000221859 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
POLR2I-201ENST00000221859 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
POLR2I-201ENST00000221859 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
POLR2I-201ENST00000221859 OSCARQ8IYS5 282 aa28.71■■■□□ 2.19
POLR2I-201ENST00000221859 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
POLR2I-201ENST00000221859 MROH2BQ7Z745 1585 aa28.64■■■□□ 2.18
POLR2I-201ENST00000221859 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
POLR2I-201ENST00000221859 WDR62O43379 1518 aa28.63■■■□□ 2.17
POLR2I-201ENST00000221859 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
POLR2I-201ENST00000221859 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
POLR2I-201ENST00000221859 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
POLR2I-201ENST00000221859 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
POLR2I-201ENST00000221859 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
POLR2I-201ENST00000221859 WIZO95785 1651 aa28.29■■■□□ 2.12
POLR2I-201ENST00000221859 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
POLR2I-201ENST00000221859 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
POLR2I-201ENST00000221859 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
POLR2I-201ENST00000221859 AEBP2Q6ZN18 517 aaPredicted RBP28.16■■■□□ 2.1
POLR2I-201ENST00000221859 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
POLR2I-201ENST00000221859 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
POLR2I-201ENST00000221859 URB2Q14146 1524 aaKnown RBP28■■■□□ 2.07
POLR2I-201ENST00000221859 CFTRP13569 1480 aa27.96■■■□□ 2.07
POLR2I-201ENST00000221859 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
POLR2I-201ENST00000221859 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
POLR2I-201ENST00000221859 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
POLR2I-201ENST00000221859 IFT140Q96RY7 1462 aa27.82■■■□□ 2.04
POLR2I-201ENST00000221859 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
POLR2I-201ENST00000221859 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
POLR2I-201ENST00000221859 CHD1O14646 1710 aa27.55■■■□□ 2
POLR2I-201ENST00000221859 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
POLR2I-201ENST00000221859 FBLN2P98095 1184 aa27.48■■□□□ 1.99
POLR2I-201ENST00000221859 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
POLR2I-201ENST00000221859 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
POLR2I-201ENST00000221859 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
POLR2I-201ENST00000221859 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
POLR2I-201ENST00000221859 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
POLR2I-201ENST00000221859 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
POLR2I-201ENST00000221859 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
POLR2I-201ENST00000221859 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
POLR2I-201ENST00000221859 POLA1P09884 1462 aaPredicted RBP27.16■■□□□ 1.94
POLR2I-201ENST00000221859 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
POLR2I-201ENST00000221859 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
POLR2I-201ENST00000221859 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
POLR2I-201ENST00000221859 ILDR1Q86SU0 546 aaPredicted RBP27.12■■□□□ 1.93
POLR2I-201ENST00000221859 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
POLR2I-201ENST00000221859 MAGI1Q96QZ7 1491 aaPredicted RBP27.06■■□□□ 1.92
POLR2I-201ENST00000221859 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
POLR2I-201ENST00000221859 WDR97A6NE52 1622 aa27.03■■□□□ 1.92
POLR2I-201ENST00000221859 SOGA1O94964 1423 aa27.02■■□□□ 1.92
POLR2I-201ENST00000221859 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
POLR2I-201ENST00000221859 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
POLR2I-201ENST00000221859 CUX1P39880 1505 aa26.86■■□□□ 1.89
POLR2I-201ENST00000221859 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
POLR2I-201ENST00000221859 KDM4FA0A1W2PPD8 638 aa26.77■■□□□ 1.88
POLR2I-201ENST00000221859 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
POLR2I-201ENST00000221859 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
POLR2I-201ENST00000221859 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
POLR2I-201ENST00000221859 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
POLR2I-201ENST00000221859 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
POLR2I-201ENST00000221859 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
POLR2I-201ENST00000221859 FAM69CQ0P6D2 419 aa26.57■■□□□ 1.84
POLR2I-201ENST00000221859 ABCC10Q5T3U5 1492 aa26.56■■□□□ 1.84
POLR2I-201ENST00000221859 NUP160Q12769 1436 aa26.56■■□□□ 1.84
POLR2I-201ENST00000221859 SHROOM2Q13796 1616 aa26.52■■□□□ 1.84
POLR2I-201ENST00000221859 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
POLR2I-201ENST00000221859 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
POLR2I-201ENST00000221859 ABCA5Q8WWZ7 1642 aa26.49■■□□□ 1.83
POLR2I-201ENST00000221859 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
POLR2I-201ENST00000221859 KDM6BO15054 1643 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms